RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 OR10J3Q5JRS4 329 aa12.21□□□□□ -0.46
USF2-202ENST00000343550 OR10G8Q8NGN5 311 aa12.21□□□□□ -0.46
USF2-202ENST00000343550 RPL36ALQ969Q0 106 aaKnown RBP12.21□□□□□ -0.46
USF2-202ENST00000343550 TRGC1P0CF51 173 aa12.2□□□□□ -0.46
USF2-202ENST00000343550 KRTAP10-2P60368 255 aa12.2□□□□□ -0.46
USF2-202ENST00000343550 UBE2D3P61077 147 aa12.2□□□□□ -0.46
USF2-202ENST00000343550 UBE2D2P62837 147 aa12.2□□□□□ -0.46
USF2-202ENST00000343550 TWIST1Q15672 202 aa12.2□□□□□ -0.46
USF2-202ENST00000343550 NEXN-AS1Q8NBZ9 246 aa12.2□□□□□ -0.46
USF2-202ENST00000343550 ISOC2Q96AB3 205 aa12.2□□□□□ -0.46
USF2-202ENST00000343550 NAT8Q9UHE5 227 aa12.2□□□□□ -0.46
USF2-202ENST00000343550 IFITM2Q01629 132 aa12.19□□□□□ -0.46
USF2-202ENST00000343550 A0A087WWC5 75 aa12.18□□□□□ -0.46
USF2-202ENST00000343550 TSKUQ8WUA8 353 aa12.18□□□□□ -0.46
USF2-202ENST00000343550 PGLYRP4Q96LB8 373 aa12.18□□□□□ -0.46
USF2-202ENST00000343550 TNFRSF18Q9Y5U5 241 aa12.18□□□□□ -0.46
USF2-202ENST00000343550 M0QY20 66 aa12.17□□□□□ -0.46
USF2-202ENST00000343550 MGPP08493 103 aa12.17□□□□□ -0.46
USF2-202ENST00000343550 LINC01556Q5JQF7 62 aa12.17□□□□□ -0.46
USF2-202ENST00000343550 CLLU1Q5K131 121 aa12.17□□□□□ -0.46
USF2-202ENST00000343550 C15orf54Q8N8G6 183 aa12.17□□□□□ -0.46
USF2-202ENST00000343550 GFRA4Q9GZZ7 299 aa12.17□□□□□ -0.46
USF2-202ENST00000343550 DPH3P1Q9H4G8 78 aa12.17□□□□□ -0.46
USF2-202ENST00000343550 V9GYV3 84 aa12.17□□□□□ -0.46
USF2-202ENST00000343550 ADIRFQ15847 76 aa12.16□□□□□ -0.46
USF2-202ENST00000343550 Q8N1X5 172 aa12.16□□□□□ -0.46
USF2-202ENST00000343550 FAM231BA6NCW3 169 aa12.16□□□□□ -0.46
USF2-202ENST00000343550 SUMO4Q6EEV6 95 aa12.16□□□□□ -0.46
USF2-202ENST00000343550 HIGD1CA8MV81 97 aa12.15□□□□□ -0.46
USF2-202ENST00000343550 Q6ZRN7 208 aaPredicted RBP12.15□□□□□ -0.46
USF2-202ENST00000343550 C10orf126Q8N4M7 172 aa12.15□□□□□ -0.46
USF2-202ENST00000343550 H7C1H1 209 aa12.14□□□□□ -0.47
USF2-202ENST00000343550 IGHV3-30P01768 117 aa12.13□□□□□ -0.47
USF2-202ENST00000343550 IGHV3-33P01772 117 aa12.13□□□□□ -0.47
USF2-202ENST00000343550 IGHV3-30-3P0DP02 117 aa12.13□□□□□ -0.47
USF2-202ENST00000343550 IGHV3-30-5P0DP03 117 aa12.13□□□□□ -0.47
USF2-202ENST00000343550 DNAJC30Q96LL9 226 aa12.13□□□□□ -0.47
USF2-202ENST00000343550 RASL11AQ6T310 242 aa12.12□□□□□ -0.47
USF2-202ENST00000343550 APOBP04114 4563 aaKnown RBP12.12□□□□□ -0.47
USF2-202ENST00000343550 A0A1B0GUT8 65 aa12.11□□□□□ -0.47
USF2-202ENST00000343550 IBA57-AS1B1ANH7 110 aa12.11□□□□□ -0.47
USF2-202ENST00000343550 SMIM15Q7Z3B0 74 aa12.11□□□□□ -0.47
USF2-202ENST00000343550 DAZ4Q86SG3 579 aaKnown RBP12.11□□□□□ -0.47
USF2-202ENST00000343550 NFE4Q86UQ8 179 aa12.11□□□□□ -0.47
USF2-202ENST00000343550 Q8N3U1 123 aa12.11□□□□□ -0.47
USF2-202ENST00000343550 BORCS7Q96B45 105 aa12.11□□□□□ -0.47
USF2-202ENST00000343550 NIT2Q9NQR4 276 aa12.11□□□□□ -0.47
USF2-202ENST00000343550 DAZ3Q9NR90 486 aaKnown RBP12.11□□□□□ -0.47
USF2-202ENST00000343550 DNAH5Q8TE73 4624 aa12.11□□□□□ -0.47
USF2-202ENST00000343550 TRBV6-8A0A0A6YYG3 113 aa12.11□□□□□ -0.47
USF2-202ENST00000343550 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.11□□□□□ -0.47
USF2-202ENST00000343550 NUP35Q8NFH5 326 aa12.11□□□□□ -0.47
USF2-202ENST00000343550 PGPEP1Q9NXJ5 209 aa12.11□□□□□ -0.47
USF2-202ENST00000343550 NDUFA5Q16718 116 aa12.1□□□□□ -0.47
USF2-202ENST00000343550 NIT1Q86X76 327 aa12.1□□□□□ -0.47
USF2-202ENST00000343550 GATD1Q8NB37 220 aa12.1□□□□□ -0.47
USF2-202ENST00000343550 SMIM27A0A1W2PRY6 76 aa12.09□□□□□ -0.47
USF2-202ENST00000343550 EREGO14944 169 aa12.09□□□□□ -0.47
USF2-202ENST00000343550 NTM-AS1Q6ZSK4 140 aa12.09□□□□□ -0.47
USF2-202ENST00000343550 NAT8BQ9UHF3 227 aa12.09□□□□□ -0.47
USF2-202ENST00000343550 TRAV26-2A0A0B4J265 109 aa12.08□□□□□ -0.48
USF2-202ENST00000343550 TMEM97Q5BJF2 176 aa12.08□□□□□ -0.48
USF2-202ENST00000343550 FRZBQ92765 325 aa12.07□□□□□ -0.48
USF2-202ENST00000343550 TMEM191AQ9H0A3 160 aa12.07□□□□□ -0.48
USF2-202ENST00000343550 FUSP35637 526 aaKnown RBP eCLIP12.06□□□□□ -0.48
USF2-202ENST00000343550 RIGQ13278 110 aa12.06□□□□□ -0.48
USF2-202ENST00000343550 URGCP-MRPS24S4R325 110 aa12.06□□□□□ -0.48
USF2-202ENST00000343550 LAGE3Q14657 143 aa12.06□□□□□ -0.48
USF2-202ENST00000343550 TMEM262E9PQX1 116 aa12.05□□□□□ -0.48
USF2-202ENST00000343550 CDPF1Q6NVV7 123 aa12.05□□□□□ -0.48
USF2-202ENST00000343550 CHCHD7Q9BUK0 85 aa12.05□□□□□ -0.48
USF2-202ENST00000343550 A0A087WX48 190 aa12.04□□□□□ -0.48
USF2-202ENST00000343550 RAB4AP20338 218 aa12.04□□□□□ -0.48
USF2-202ENST00000343550 PNRC1Q12796 327 aaPredicted RBP12.04□□□□□ -0.48
USF2-202ENST00000343550 UQCC3Q6UW78 93 aa12.04□□□□□ -0.48
USF2-202ENST00000343550 RPL39LQ96EH5 51 aaKnown RBP12.04□□□□□ -0.48
USF2-202ENST00000343550 RNF185Q96GF1 192 aa12.04□□□□□ -0.48
USF2-202ENST00000343550 Q9HAA7 133 aa12.04□□□□□ -0.48
USF2-202ENST00000343550 A0A087WTM6 91 aa12.03□□□□□ -0.48
USF2-202ENST00000343550 ATP6V1G1O75348 118 aa12.03□□□□□ -0.48
USF2-202ENST00000343550 IQCJQ1A5X6 159 aa12.03□□□□□ -0.48
USF2-202ENST00000343550 KCNIP4Q6PIL6 250 aa12.03□□□□□ -0.48
USF2-202ENST00000343550 CHCHD5Q9BSY4 110 aa12.03□□□□□ -0.48
USF2-202ENST00000343550 TRBV25-1A0A075B6N4 114 aa12.02□□□□□ -0.48
USF2-202ENST00000343550 TRAV8-3A0A0A6YYJ7 113 aa12.02□□□□□ -0.48
USF2-202ENST00000343550 GAS8-AS1O95177 125 aa12.02□□□□□ -0.48
USF2-202ENST00000343550 AMN1Q8IY45 258 aa12.02□□□□□ -0.48
USF2-202ENST00000343550 KLK12Q9UKR0 248 aa12.02□□□□□ -0.48
USF2-202ENST00000343550 IGHV1-24A0A0C4DH33 117 aa12.01□□□□□ -0.49
USF2-202ENST00000343550 PPP1R2P9O14990 202 aa12.01□□□□□ -0.49
USF2-202ENST00000343550 DEFB104AQ8WTQ1 72 aa12.01□□□□□ -0.49
USF2-202ENST00000343550 TMEM218A2RU14 115 aa12.01□□□□□ -0.49
USF2-202ENST00000343550 EPM2AB3EWF7 344 aa12.01□□□□□ -0.49
USF2-202ENST00000343550 ELOBQ15370 118 aa12.01□□□□□ -0.49
USF2-202ENST00000343550 MPV17L2Q567V2 206 aa12.01□□□□□ -0.49
USF2-202ENST00000343550 ATRAIDQ6UW56 229 aa12.01□□□□□ -0.49
USF2-202ENST00000343550 TRBV6-5A0A0K0K1A5 114 aa12□□□□□ -0.49
USF2-202ENST00000343550 XGP55808 180 aa12□□□□□ -0.49
USF2-202ENST00000343550 PKIAP61925 76 aa12□□□□□ -0.49
USF2-202ENST00000343550 A0A1B0GW15 77 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms