RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 SMIM17P0DL12 118 aa6.55□□□□□ -1.36
CCDC58-201ENST00000291458 HAMPP81172 84 aa6.55□□□□□ -1.36
CCDC58-201ENST00000291458 FER1L6-AS1Q8NA97 138 aa6.55□□□□□ -1.36
CCDC58-201ENST00000291458 NEXN-AS1Q8NBZ9 246 aa6.55□□□□□ -1.36
CCDC58-201ENST00000291458 AP1S3Q96PC3 154 aa6.55□□□□□ -1.36
CCDC58-201ENST00000291458 VAX2Q9UIW0 290 aa6.55□□□□□ -1.36
CCDC58-201ENST00000291458 URGCP-MRPS24S4R325 110 aa6.55□□□□□ -1.36
CCDC58-201ENST00000291458 CDK2AP2O75956 126 aa6.54□□□□□ -1.36
CCDC58-201ENST00000291458 CXCL1P09341 107 aa6.54□□□□□ -1.36
CCDC58-201ENST00000291458 OR5AL1P0C617 328 aa6.54□□□□□ -1.36
CCDC58-201ENST00000291458 DNAJC30Q96LL9 226 aa6.54□□□□□ -1.36
CCDC58-201ENST00000291458 PKHD1P08F94 4074 aa6.54□□□□□ -1.36
CCDC58-201ENST00000291458 TRBV7-3A0A075B6L6 115 aa6.53□□□□□ -1.36
CCDC58-201ENST00000291458 A0A087WWC5 75 aa6.53□□□□□ -1.36
CCDC58-201ENST00000291458 K7EP13 123 aa6.53□□□□□ -1.36
CCDC58-201ENST00000291458 KRTAP10-1P60331 282 aa6.53□□□□□ -1.36
CCDC58-201ENST00000291458 RAB4BP61018 213 aa6.53□□□□□ -1.36
CCDC58-201ENST00000291458 UBE2D3P61077 147 aa6.53□□□□□ -1.36
CCDC58-201ENST00000291458 UBE2D2P62837 147 aa6.53□□□□□ -1.36
CCDC58-201ENST00000291458 WFDC2Q14508 124 aa6.53□□□□□ -1.36
CCDC58-201ENST00000291458 TOR2AQ5JU69 321 aa6.53□□□□□ -1.36
CCDC58-201ENST00000291458 KCNIP4Q6PIL6 250 aa6.53□□□□□ -1.36
CCDC58-201ENST00000291458 DEFB104AQ8WTQ1 72 aa6.53□□□□□ -1.36
CCDC58-201ENST00000291458 KLK12Q9UKR0 248 aa6.53□□□□□ -1.36
CCDC58-201ENST00000291458 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.52□□□□□ -1.37
CCDC58-201ENST00000291458 IGKV2D-24A0A075B6R9 120 aa6.52□□□□□ -1.37
CCDC58-201ENST00000291458 A0A087WX48 190 aa6.52□□□□□ -1.37
CCDC58-201ENST00000291458 IGLV5-52A0A0A0MRZ9 124 aa6.52□□□□□ -1.37
CCDC58-201ENST00000291458 TRBV10-1A0A0K0K1A3 114 aa6.52□□□□□ -1.37
CCDC58-201ENST00000291458 C19orf71A6NCJ1 209 aa6.52□□□□□ -1.37
CCDC58-201ENST00000291458 TMEM262E9PQX1 116 aa6.52□□□□□ -1.37
CCDC58-201ENST00000291458 IGLC6P0CF74 106 aa6.52□□□□□ -1.37
CCDC58-201ENST00000291458 RPS20P60866 119 aaKnown RBP6.52□□□□□ -1.37
CCDC58-201ENST00000291458 CLPSL2Q6UWE3 100 aa6.52□□□□□ -1.37
CCDC58-201ENST00000291458 LYZL1Q6UWQ5 148 aa6.52□□□□□ -1.37
CCDC58-201ENST00000291458 NIT1Q86X76 327 aa6.52□□□□□ -1.37
CCDC58-201ENST00000291458 NUDT10Q8NFP7 164 aa6.52□□□□□ -1.37
CCDC58-201ENST00000291458 UBE2WQ96B02 151 aa6.52□□□□□ -1.37
CCDC58-201ENST00000291458 NUDT11Q96G61 164 aa6.52□□□□□ -1.37
CCDC58-201ENST00000291458 CHCHD5Q9BSY4 110 aa6.52□□□□□ -1.37
CCDC58-201ENST00000291458 RNASE7Q9H1E1 156 aaKnown RBP6.52□□□□□ -1.37
CCDC58-201ENST00000291458 HERC2O95714 4834 aa6.52□□□□□ -1.37
CCDC58-201ENST00000291458 PKD1P98161 4303 aa6.52□□□□□ -1.37
CCDC58-201ENST00000291458 XKRY2A2RUG3 117 aa6.51□□□□□ -1.37
CCDC58-201ENST00000291458 LRCOL1A6NCL2 159 aa6.51□□□□□ -1.37
CCDC58-201ENST00000291458 K7EN84 100 aa6.51□□□□□ -1.37
CCDC58-201ENST00000291458 BLOC1S1P78537 153 aa6.51□□□□□ -1.37
CCDC58-201ENST00000291458 LAGE3Q14657 143 aa6.51□□□□□ -1.37
CCDC58-201ENST00000291458 C15orf54Q8N8G6 183 aa6.51□□□□□ -1.37
CCDC58-201ENST00000291458 RPP21Q9H633 154 aaKnown RBP6.51□□□□□ -1.37
CCDC58-201ENST00000291458 TRAV8-3A0A0A6YYJ7 113 aa6.5□□□□□ -1.37
CCDC58-201ENST00000291458 GCSHP23434 173 aa6.5□□□□□ -1.37
CCDC58-201ENST00000291458 CACNG7P62955 275 aa6.5□□□□□ -1.37
CCDC58-201ENST00000291458 GAGE6Q13070 117 aa6.5□□□□□ -1.37
CCDC58-201ENST00000291458 MPV17L2Q567V2 206 aa6.5□□□□□ -1.37
CCDC58-201ENST00000291458 SUMO4Q6EEV6 95 aa6.5□□□□□ -1.37
CCDC58-201ENST00000291458 Q8N814 137 aa6.5□□□□□ -1.37
CCDC58-201ENST00000291458 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.5□□□□□ -1.37
CCDC58-201ENST00000291458 OR10G8Q8NGN5 311 aa6.5□□□□□ -1.37
CCDC58-201ENST00000291458 BAALCQ8WXS3 180 aa6.5□□□□□ -1.37
CCDC58-201ENST00000291458 TM2D2Q9BX73 214 aa6.5□□□□□ -1.37
CCDC58-201ENST00000291458 BIN3Q9NQY0 253 aa6.5□□□□□ -1.37
CCDC58-201ENST00000291458 TRBV6-8A0A0A6YYG3 113 aa6.49□□□□□ -1.37
CCDC58-201ENST00000291458 CRPP02741 224 aa6.49□□□□□ -1.37
CCDC58-201ENST00000291458 ANGP03950 147 aaKnown RBP6.49□□□□□ -1.37
CCDC58-201ENST00000291458 TAGLN2P37802 199 aaKnown RBP6.49□□□□□ -1.37
CCDC58-201ENST00000291458 OCC1Q8TAD7 63 aa6.49□□□□□ -1.37
CCDC58-201ENST00000291458 SMIM12Q96EX1 92 aa6.49□□□□□ -1.37
CCDC58-201ENST00000291458 EIF5A2Q9GZV4 153 aaKnown RBP6.49□□□□□ -1.37
CCDC58-201ENST00000291458 KIF25-AS1Q9Y6Z4 181 aa6.49□□□□□ -1.37
CCDC58-201ENST00000291458 TRAV26-2A0A0B4J265 109 aa6.48□□□□□ -1.37
CCDC58-201ENST00000291458 GATCO43716 136 aaKnown RBP6.48□□□□□ -1.37
CCDC58-201ENST00000291458 HLA-DQA1P01909 254 aa6.48□□□□□ -1.37
CCDC58-201ENST00000291458 TRGC1P0CF51 173 aa6.48□□□□□ -1.37
CCDC58-201ENST00000291458 NTF3P20783 257 aa6.48□□□□□ -1.37
CCDC58-201ENST00000291458 CTRLP40313 264 aa6.48□□□□□ -1.37
CCDC58-201ENST00000291458 TWIST1Q15672 202 aa6.48□□□□□ -1.37
CCDC58-201ENST00000291458 LINC01620Q4KN68 170 aa6.48□□□□□ -1.37
CCDC58-201ENST00000291458 Q8N1X5 172 aa6.48□□□□□ -1.37
CCDC58-201ENST00000291458 Q8N976 141 aa6.48□□□□□ -1.37
CCDC58-201ENST00000291458 RMI2Q96E14 147 aa6.48□□□□□ -1.37
CCDC58-201ENST00000291458 DPH3P1Q9H4G8 78 aa6.48□□□□□ -1.37
CCDC58-201ENST00000291458 H7C1H1 209 aa6.47□□□□□ -1.37
CCDC58-201ENST00000291458 M0QY20 66 aa6.47□□□□□ -1.37
CCDC58-201ENST00000291458 SMR3BP02814 79 aaPredicted RBP6.47□□□□□ -1.37
CCDC58-201ENST00000291458 NTM-AS1Q6ZSK4 140 aa6.47□□□□□ -1.37
CCDC58-201ENST00000291458 PGLYRP4Q96LB8 373 aa6.47□□□□□ -1.37
CCDC58-201ENST00000291458 SMIM7Q9BQ49 75 aa6.47□□□□□ -1.37
CCDC58-201ENST00000291458 DNAH11Q96DT5 4516 aa6.47□□□□□ -1.37
CCDC58-201ENST00000291458 TRBV25-1A0A075B6N4 114 aa6.46□□□□□ -1.38
CCDC58-201ENST00000291458 F2Z2F3 143 aa6.46□□□□□ -1.38
CCDC58-201ENST00000291458 TMEM250H0YL14 139 aa6.46□□□□□ -1.38
CCDC58-201ENST00000291458 FOXA3P55318 350 aaPredicted RBP6.46□□□□□ -1.38
CCDC58-201ENST00000291458 XGP55808 180 aa6.46□□□□□ -1.38
CCDC58-201ENST00000291458 ELOBQ15370 118 aa6.46□□□□□ -1.38
CCDC58-201ENST00000291458 RASL11AQ6T310 242 aa6.46□□□□□ -1.38
CCDC58-201ENST00000291458 ATRAIDQ6UW56 229 aa6.46□□□□□ -1.38
CCDC58-201ENST00000291458 NTN5Q8WTR8 489 aaPredicted RBP6.46□□□□□ -1.38
CCDC58-201ENST00000291458 C1orf43Q9BWL3 253 aa6.46□□□□□ -1.38
CCDC58-201ENST00000291458 DYNC1H1Q14204 4646 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms