RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 DNAH5Q8TE73 4624 aa8.6□□□□□ -1.03
VPREB3-201ENST00000248948 A8MWL6 223 aa8.59□□□□□ -1.03
VPREB3-201ENST00000248948 EREGO14944 169 aa8.59□□□□□ -1.03
VPREB3-201ENST00000248948 IGHV3-30P01768 117 aa8.59□□□□□ -1.03
VPREB3-201ENST00000248948 IGHV3-33P01772 117 aa8.59□□□□□ -1.03
VPREB3-201ENST00000248948 IGHV3-30-3P0DP02 117 aa8.59□□□□□ -1.03
VPREB3-201ENST00000248948 IGHV3-30-5P0DP03 117 aa8.59□□□□□ -1.03
VPREB3-201ENST00000248948 SUMO4Q6EEV6 95 aa8.59□□□□□ -1.03
VPREB3-201ENST00000248948 SPATA12Q7Z6I5 190 aa8.59□□□□□ -1.03
VPREB3-201ENST00000248948 DAZ4Q86SG3 579 aaKnown RBP8.59□□□□□ -1.03
VPREB3-201ENST00000248948 NIT1Q86X76 327 aa8.59□□□□□ -1.03
VPREB3-201ENST00000248948 GTSF1Q8WW33 167 aa8.59□□□□□ -1.03
VPREB3-201ENST00000248948 DAZ3Q9NR90 486 aaKnown RBP8.59□□□□□ -1.03
VPREB3-201ENST00000248948 TNFRSF18Q9Y5U5 241 aa8.59□□□□□ -1.03
VPREB3-201ENST00000248948 URGCP-MRPS24S4R325 110 aa8.59□□□□□ -1.03
VPREB3-201ENST00000248948 LRP1BQ9NZR2 4599 aa8.58□□□□□ -1.04
VPREB3-201ENST00000248948 TRBV6-8A0A0A6YYG3 113 aa8.58□□□□□ -1.04
VPREB3-201ENST00000248948 M0QY20 66 aa8.58□□□□□ -1.04
VPREB3-201ENST00000248948 NTF3P20783 257 aa8.58□□□□□ -1.04
VPREB3-201ENST00000248948 PKIAP61925 76 aa8.58□□□□□ -1.04
VPREB3-201ENST00000248948 PEA15Q15121 130 aa8.58□□□□□ -1.04
VPREB3-201ENST00000248948 CDPF1Q6NVV7 123 aa8.58□□□□□ -1.04
VPREB3-201ENST00000248948 GFRA4Q9GZZ7 299 aa8.58□□□□□ -1.04
VPREB3-201ENST00000248948 RYR1P21817 5038 aa8.57□□□□□ -1.04
VPREB3-201ENST00000248948 A0A087WTM6 91 aa8.57□□□□□ -1.04
VPREB3-201ENST00000248948 TRAV8-3A0A0A6YYJ7 113 aa8.57□□□□□ -1.04
VPREB3-201ENST00000248948 FAM231BA6NCW3 169 aa8.57□□□□□ -1.04
VPREB3-201ENST00000248948 FOXA3P55318 350 aaPredicted RBP8.57□□□□□ -1.04
VPREB3-201ENST00000248948 TWIST1Q15672 202 aa8.57□□□□□ -1.04
VPREB3-201ENST00000248948 KCNIP4Q6PIL6 250 aa8.57□□□□□ -1.04
VPREB3-201ENST00000248948 RASL11AQ6T310 242 aa8.57□□□□□ -1.04
VPREB3-201ENST00000248948 OSTCQ9NRP0 149 aa8.57□□□□□ -1.04
VPREB3-201ENST00000248948 A0A087WX48 190 aa8.56□□□□□ -1.04
VPREB3-201ENST00000248948 PSCAO43653 123 aa8.56□□□□□ -1.04
VPREB3-201ENST00000248948 ELOBQ15370 118 aa8.56□□□□□ -1.04
VPREB3-201ENST00000248948 SMIM15Q7Z3B0 74 aa8.56□□□□□ -1.04
VPREB3-201ENST00000248948 Q8N3U1 123 aa8.56□□□□□ -1.04
VPREB3-201ENST00000248948 C15orf54Q8N8G6 183 aa8.56□□□□□ -1.04
VPREB3-201ENST00000248948 TSKUQ8WUA8 353 aa8.56□□□□□ -1.04
VPREB3-201ENST00000248948 FRZBQ92765 325 aa8.56□□□□□ -1.04
VPREB3-201ENST00000248948 BORCS7Q96B45 105 aa8.56□□□□□ -1.04
VPREB3-201ENST00000248948 Q9HAA7 133 aa8.56□□□□□ -1.04
VPREB3-201ENST00000248948 KRTAP10-2P60368 255 aa8.55□□□□□ -1.04
VPREB3-201ENST00000248948 TMEM241Q24JQ0 296 aa8.55□□□□□ -1.04
VPREB3-201ENST00000248948 ISOC2Q96AB3 205 aa8.55□□□□□ -1.04
VPREB3-201ENST00000248948 TM2D2Q9BX73 214 aa8.55□□□□□ -1.04
VPREB3-201ENST00000248948 NAT8Q9UHE5 227 aa8.55□□□□□ -1.04
VPREB3-201ENST00000248948 TRBV25-1A0A075B6N4 114 aa8.54□□□□□ -1.04
VPREB3-201ENST00000248948 HIGD1CA8MV81 97 aa8.54□□□□□ -1.04
VPREB3-201ENST00000248948 C9JQL5 133 aa8.54□□□□□ -1.04
VPREB3-201ENST00000248948 RPL23P62829 140 aaKnown RBP8.54□□□□□ -1.04
VPREB3-201ENST00000248948 RMI2Q96E14 147 aa8.54□□□□□ -1.04
VPREB3-201ENST00000248948 PGLYRP4Q96LB8 373 aa8.54□□□□□ -1.04
VPREB3-201ENST00000248948 NIT2Q9NQR4 276 aa8.54□□□□□ -1.04
VPREB3-201ENST00000248948 PGPEP1Q9NXJ5 209 aa8.54□□□□□ -1.04
VPREB3-201ENST00000248948 COX11Q9Y6N1 276 aa8.54□□□□□ -1.04
VPREB3-201ENST00000248948 V9GYV3 84 aa8.54□□□□□ -1.04
VPREB3-201ENST00000248948 APOBP04114 4563 aaKnown RBP8.53□□□□□ -1.04
VPREB3-201ENST00000248948 A0A1B0GUT8 65 aa8.53□□□□□ -1.04
VPREB3-201ENST00000248948 CDK2AP2O75956 126 aa8.53□□□□□ -1.04
VPREB3-201ENST00000248948 SRSF3P84103 164 aaKnown RBP8.53□□□□□ -1.04
VPREB3-201ENST00000248948 ADIRFQ15847 76 aa8.53□□□□□ -1.04
VPREB3-201ENST00000248948 IQCJQ1A5X6 159 aa8.53□□□□□ -1.04
VPREB3-201ENST00000248948 IGHV1-24A0A0C4DH33 117 aa8.52□□□□□ -1.05
VPREB3-201ENST00000248948 LRCOL1A6NCL2 159 aa8.52□□□□□ -1.05
VPREB3-201ENST00000248948 MPV17L2Q567V2 206 aa8.52□□□□□ -1.05
VPREB3-201ENST00000248948 ATRAIDQ6UW56 229 aa8.52□□□□□ -1.05
VPREB3-201ENST00000248948 NTM-AS1Q6ZSK4 140 aa8.52□□□□□ -1.05
VPREB3-201ENST00000248948 NTN5Q8WTR8 489 aaPredicted RBP8.52□□□□□ -1.05
VPREB3-201ENST00000248948 CHCHD5Q9BSY4 110 aa8.52□□□□□ -1.05
VPREB3-201ENST00000248948 KLK12Q9UKR0 248 aa8.52□□□□□ -1.05
VPREB3-201ENST00000248948 HSPG2P98160 4391 aa8.51□□□□□ -1.05
VPREB3-201ENST00000248948 RAB14P61106 215 aa8.51□□□□□ -1.05
VPREB3-201ENST00000248948 Q0VG73 95 aa8.51□□□□□ -1.05
VPREB3-201ENST00000248948 GATD1Q8NB37 220 aa8.51□□□□□ -1.05
VPREB3-201ENST00000248948 TRAV26-2A0A0B4J265 109 aa8.5□□□□□ -1.05
VPREB3-201ENST00000248948 TMEM262E9PQX1 116 aa8.5□□□□□ -1.05
VPREB3-201ENST00000248948 CRPP02741 224 aa8.5□□□□□ -1.05
VPREB3-201ENST00000248948 Q8N814 137 aa8.5□□□□□ -1.05
VPREB3-201ENST00000248948 UBE2WQ96B02 151 aa8.5□□□□□ -1.05
VPREB3-201ENST00000248948 TMEM191AQ9H0A3 160 aa8.5□□□□□ -1.05
VPREB3-201ENST00000248948 NAT8BQ9UHF3 227 aa8.5□□□□□ -1.05
VPREB3-201ENST00000248948 COTL1Q14019 142 aa8.49□□□□□ -1.05
VPREB3-201ENST00000248948 TMEM243Q9BU79 118 aa8.49□□□□□ -1.05
VPREB3-201ENST00000248948 TRBV6-5A0A0K0K1A5 114 aa8.48□□□□□ -1.05
VPREB3-201ENST00000248948 SMIM27A0A1W2PRY6 76 aa8.48□□□□□ -1.05
VPREB3-201ENST00000248948 NCR2O95944 276 aa8.48□□□□□ -1.05
VPREB3-201ENST00000248948 ANGP03950 147 aaKnown RBP8.48□□□□□ -1.05
VPREB3-201ENST00000248948 RIGQ13278 110 aa8.48□□□□□ -1.05
VPREB3-201ENST00000248948 CLLU1Q5K131 121 aa8.48□□□□□ -1.05
VPREB3-201ENST00000248948 NUP35Q8NFH5 326 aa8.48□□□□□ -1.05
VPREB3-201ENST00000248948 PRR34Q9NV39 138 aa8.48□□□□□ -1.05
VPREB3-201ENST00000248948 PCLOQ9Y6V0 5065 aa8.47□□□□□ -1.05
VPREB3-201ENST00000248948 IGKV2D-24A0A075B6R9 120 aa8.47□□□□□ -1.05
VPREB3-201ENST00000248948 A0A1B0GW15 77 aa8.47□□□□□ -1.05
VPREB3-201ENST00000248948 AMTP48728 403 aa8.47□□□□□ -1.05
VPREB3-201ENST00000248948 RBX1P62877 108 aa8.47□□□□□ -1.05
VPREB3-201ENST00000248948 PNRC1Q12796 327 aaPredicted RBP8.47□□□□□ -1.05
VPREB3-201ENST00000248948 GAGE6Q13070 117 aa8.47□□□□□ -1.05
VPREB3-201ENST00000248948 MIAQ16674 131 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms