RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Gm5148Q8BGG2 154 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Olfr1271Q8VG62 305 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Mogat1Q91ZV4 335 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 CenpmQ9CQA0 180 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Col6a4A2AX52 2309 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Trav12d-3A0A075B6A4 115 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Spint5J3KMK8 105 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Scgb2a2J3KMP9 96 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gfra3O35118 397 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Ascl2O35885 263 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Khdc1bP0C7A0 126 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Wt1P22561 449 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 A230072I06RikQ3UUJ8 172 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Pafah1b2Q61206 229 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 PirtQ8BFY0 135 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Olfr1475Q8VEV6 314 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Tmem9bQ9JJR8 199 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Crim1Q9JLL0 1037 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 CnmdQ9Z1F6 334 aa9.5□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Olfr1458A0A1L1SSD5 307 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Zfp976E9Q981 636 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 H3BKT1 185 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Egr1P08046 533 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Edn1P22387 202 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Rom1P32958 351 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Plscr4P58196 326 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Ankrd55Q8BLD6 626 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Slc36a4Q8CH36 500 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Pear1Q8VIK5 1034 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Nup37Q9CWU9 326 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gm9602J3QPD5 205 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Bst1Q64277 311 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Vmn1r222Q8R269 308 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 FibinQ9CQS3 217 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 MmdQ9CQY7 238 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Lsm4Q9QXA5 137 aaKnown RBP9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Hs3st3b1Q9QZS6 390 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 G6pc2Q9Z186 355 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gm14214V9GX35 225 aa9.49□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gm5741B2RVA4 72 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gm6665F6Y363 85 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Iqcf6G3UWF2 157 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Ren2P00796 401 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Lyz1P17897 148 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Fam19a2Q7TPG7 131 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Ercc8Q8CFD5 397 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Spsb4Q8R5B6 273 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Necap1Q9CR95 275 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Prr30Q9D9B7 401 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Ctnnbip1Q9JJN6 81 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 AplnrQ9WV08 377 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 DysfQ9ESD7 2090 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Trav6n-5A0A075B621 112 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Trav6-5A0A075B6B5 112 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 B2mP01887 119 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 ApcsP12246 224 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Acrv1P50289 261 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 SelenotP62342 195 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Olfr147Q60886 317 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Ypel2Q65Z95 119 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 CstadQ9D245 104 aa9.48□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Trav8n-2A0A075B633 112 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Olfr1189A2AV11 306 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Vmn1r224E9PWK2 298 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Cd59aO55186 123 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Klk1b22P15948 259 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 KncnQ307W7 124 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Nabp2Q8R2Y9 212 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Olfr1102Q8VES2 324 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Ppp1r14aQ91VC7 147 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gpr87Q99MT7 358 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Fkbp11Q9D1M7 201 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Tmem190Q9D2E9 166 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 DscamQ9ERC8 2013 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Ighv9-2A0A0B4J1J4 117 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Zfp930A0A1D5RM15 441 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Psg18B2RSG7 476 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Ly6c1P0CW02 131 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Fxyd3Q61835 88 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 PtafrQ62035 341 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Fam168aQ8BGZ2 244 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 EpcamQ99JW5 315 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Fancd2osQ9D4K4 178 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Wdr31Q9JHB4 367 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gm37388A0A0A6YY46 143 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gm21732J3QM79 361 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Gm21921J3QNB5 361 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Shisal1Q0VBP7 198 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Olfr1441Q8VFV3 318 aa9.47□□□□□ -0.89
Col9a1-202ENSMUST00000088349 F2rl2O08675 369 aa9.46□□□□□ -0.89
Col9a1-202ENSMUST00000088349 PigyP0C1P0 71 aa9.46□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Timm8bP62077 83 aaKnown RBP9.46□□□□□ -0.89
Col9a1-202ENSMUST00000088349 F7P70375 446 aa9.46□□□□□ -0.89
Col9a1-202ENSMUST00000088349 TecrQ9CY27 308 aa9.46□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Mapk1ip1Q9D7G9 263 aa9.46□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Prss37Q9DAA4 237 aa9.46□□□□□ -0.89
Col9a1-202ENSMUST00000088349 Ighv1-19A0A0A6YWX0 117 aa9.46□□□□□ -0.9
Col9a1-202ENSMUST00000088349 Trbv3A0A0A6YYE2 117 aa9.46□□□□□ -0.9
Col9a1-202ENSMUST00000088349 Fcrl6A1YIY0 268 aa9.46□□□□□ -0.9
Col9a1-202ENSMUST00000088349 H2al1jA2BFR3 109 aa9.46□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 72.9 ms