RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 GNRH2O43555 120 aa7.54□□□□□ -1.2
CACNA1A-242ENST00000637485 FGF23Q9GZV9 251 aaPredicted RBP7.54□□□□□ -1.2
CACNA1A-242ENST00000637485 SPTA1P02549 2419 aa7.53□□□□□ -1.2
CACNA1A-242ENST00000637485 GATA3P23771 443 aa7.53□□□□□ -1.2
CACNA1A-242ENST00000637485 Q6ZSR3 168 aa7.53□□□□□ -1.2
CACNA1A-242ENST00000637485 C5orf38Q86SI9 138 aa7.53□□□□□ -1.2
CACNA1A-242ENST00000637485 LINC00526Q96FQ7 95 aa7.53□□□□□ -1.2
CACNA1A-242ENST00000637485 PLXND1Q9Y4D7 1925 aa7.53□□□□□ -1.2
CACNA1A-242ENST00000637485 MRPS12O15235 138 aaKnown RBP7.53□□□□□ -1.2
CACNA1A-242ENST00000637485 KRTAP27-1Q3LI81 207 aa7.53□□□□□ -1.2
CACNA1A-242ENST00000637485 CFAP126Q5VTH2 177 aa7.53□□□□□ -1.2
CACNA1A-242ENST00000637485 GP9P14770 177 aa7.53□□□□□ -1.2
CACNA1A-242ENST00000637485 FAM19A3Q7Z5A8 133 aa7.53□□□□□ -1.2
CACNA1A-242ENST00000637485 TRBV6-1A0A0K0K1D8 114 aa7.52□□□□□ -1.2
CACNA1A-242ENST00000637485 NSUN5P1Q3KNT7 163 aa7.52□□□□□ -1.2
CACNA1A-242ENST00000637485 LINC01356Q8N9X3 169 aa7.52□□□□□ -1.21
CACNA1A-242ENST00000637485 C17orf77Q96MU5 243 aa7.52□□□□□ -1.21
CACNA1A-242ENST00000637485 PI4KAP42356 2102 aa7.52□□□□□ -1.21
CACNA1A-242ENST00000637485 LTBP2Q14767 1821 aa7.52□□□□□ -1.21
CACNA1A-242ENST00000637485 IGF2-ASQ6U949 168 aa7.52□□□□□ -1.21
CACNA1A-242ENST00000637485 HEATR5AQ86XA9 2040 aa7.52□□□□□ -1.21
CACNA1A-242ENST00000637485 PHF3Q92576 2039 aaKnown RBP7.52□□□□□ -1.21
CACNA1A-242ENST00000637485 MED14OSP0DP75 135 aa7.52□□□□□ -1.21
CACNA1A-242ENST00000637485 SAA4P35542 130 aa7.52□□□□□ -1.21
CACNA1A-242ENST00000637485 PRO0628Q9UI54 55 aa7.52□□□□□ -1.21
CACNA1A-242ENST00000637485 IGKV4-1P06312 121 aa7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 LOXP28300 417 aaPredicted RBP7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 BPESC1Q9GZL8 116 aa7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 MSRB1Q9NZV6 116 aa7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 FAM215AQ9Y5M1 114 aa7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 TEX22C9J3V5 150 aa7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 PIK3CD-AS1Q5SR53 167 aa7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 IGHV3-30-3P0DP02 117 aa7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 DENND4CQ5VZ89 1909 aa7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 IGHV7-4-1A0A0J9YVY3 117 aa7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 IGFL2Q6UWQ7 119 aa7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 C9orf47Q6ZRZ4 202 aa7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 MIR7-3HGQ8N6C7 128 aa7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 KAAG1Q9UBP8 84 aa7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 VPREB3Q9UKI3 123 aa7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 SNURFQ9Y675 71 aa7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 MED12Q93074 2177 aa7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 NFE4Q86UQ8 179 aa7.51□□□□□ -1.21
CACNA1A-242ENST00000637485 A0A0J9YXY3 114 aa7.5□□□□□ -1.21
CACNA1A-242ENST00000637485 RPL39P62891 51 aaKnown RBP7.5□□□□□ -1.21
CACNA1A-242ENST00000637485 TRBV27A0A0K0K1C4 114 aa7.5□□□□□ -1.21
CACNA1A-242ENST00000637485 A0A1B0GXF2 115 aa7.5□□□□□ -1.21
CACNA1A-242ENST00000637485 BRD3OSQ6XYD6 125 aa7.5□□□□□ -1.21
CACNA1A-242ENST00000637485 NCR3O14931 201 aa7.5□□□□□ -1.21
CACNA1A-242ENST00000637485 CLPSL2Q6UWE3 100 aa7.5□□□□□ -1.21
CACNA1A-242ENST00000637485 LINC01619G3V211 115 aa7.49□□□□□ -1.21
CACNA1A-242ENST00000637485 COX7BP24311 80 aa7.49□□□□□ -1.21
CACNA1A-242ENST00000637485 NRGNQ92686 78 aa7.49□□□□□ -1.21
CACNA1A-242ENST00000637485 CAMK2N2Q96S95 79 aa7.49□□□□□ -1.21
CACNA1A-242ENST00000637485 DOCK8Q8NF50 2099 aa7.49□□□□□ -1.21
CACNA1A-242ENST00000637485 CASC2Q6XLA1 102 aa7.49□□□□□ -1.21
CACNA1A-242ENST00000637485 RTTNQ86VV8 2226 aa7.49□□□□□ -1.21
CACNA1A-242ENST00000637485 H0Y9J4 135 aa7.49□□□□□ -1.21
CACNA1A-242ENST00000637485 MDFICQ9P1T7 246 aa7.49□□□□□ -1.21
CACNA1A-242ENST00000637485 ZNF106Q9H2Y7 1883 aaKnown RBP7.49□□□□□ -1.21
CACNA1A-242ENST00000637485 NCOR1O75376 2440 aa7.48□□□□□ -1.21
CACNA1A-242ENST00000637485 TRIAP1O43715 76 aa7.48□□□□□ -1.21
CACNA1A-242ENST00000637485 Q6JHZ5 121 aa7.48□□□□□ -1.21
CACNA1A-242ENST00000637485 ZNRD1Q9P1U0 126 aa7.48□□□□□ -1.21
CACNA1A-242ENST00000637485 MSMBP08118 114 aa7.48□□□□□ -1.21
CACNA1A-242ENST00000637485 LY6HO94772 140 aa7.48□□□□□ -1.21
CACNA1A-242ENST00000637485 FRMD6-AS1P0C7T7 363 aa7.48□□□□□ -1.21
CACNA1A-242ENST00000637485 C19orf71A6NCJ1 209 aa7.48□□□□□ -1.21
CACNA1A-242ENST00000637485 K7EQD1 137 aa7.47□□□□□ -1.21
CACNA1A-242ENST00000637485 IGHV3-33P01772 117 aa7.47□□□□□ -1.21
CACNA1A-242ENST00000637485 MIFP14174 115 aa7.47□□□□□ -1.21
CACNA1A-242ENST00000637485 H3BUA1 57 aa7.47□□□□□ -1.21
CACNA1A-242ENST00000637485 C11orf53Q8IXP5 236 aa7.47□□□□□ -1.21
CACNA1A-242ENST00000637485 FAM167A-AS1Q96KT0 104 aa7.47□□□□□ -1.21
CACNA1A-242ENST00000637485 TPSG1Q9NRR2 321 aa7.47□□□□□ -1.21
CACNA1A-242ENST00000637485 C20orf203Q8NBC4 194 aa7.47□□□□□ -1.21
CACNA1A-242ENST00000637485 NDUFA1O15239 70 aa7.46□□□□□ -1.21
CACNA1A-242ENST00000637485 SPRY4Q9C004 299 aa7.46□□□□□ -1.21
CACNA1A-242ENST00000637485 KIF26AQ9ULI4 1882 aaPredicted RBP7.46□□□□□ -1.21
CACNA1A-242ENST00000637485 TRAV7A0A075B6U4 112 aa7.46□□□□□ -1.22
CACNA1A-242ENST00000637485 A0A0J9YY99 117 aa7.46□□□□□ -1.22
CACNA1A-242ENST00000637485 G3V318 75 aa7.46□□□□□ -1.22
CACNA1A-242ENST00000637485 LHBP01229 141 aa7.46□□□□□ -1.22
CACNA1A-242ENST00000637485 TP73-AS1Q9UF72 201 aa7.46□□□□□ -1.22
CACNA1A-242ENST00000637485 IGHV4OR15-8A0A075B7B6 117 aa7.46□□□□□ -1.22
CACNA1A-242ENST00000637485 A0A087WW49 117 aa7.46□□□□□ -1.22
CACNA1A-242ENST00000637485 TIRAPP58753 221 aa7.45□□□□□ -1.22
CACNA1A-242ENST00000637485 YPEL4Q96NS1 127 aa7.45□□□□□ -1.22
CACNA1A-242ENST00000637485 CACNA1GO43497 2377 aa7.45□□□□□ -1.22
CACNA1A-242ENST00000637485 J3QLI3 93 aa7.45□□□□□ -1.22
CACNA1A-242ENST00000637485 PATE2Q6UY27 113 aa7.45□□□□□ -1.22
CACNA1A-242ENST00000637485 ABCA1O95477 2261 aa7.45□□□□□ -1.22
CACNA1A-242ENST00000637485 PRSS33Q8NF86 280 aa7.45□□□□□ -1.22
CACNA1A-242ENST00000637485 IGKV2D-24A0A075B6R9 120 aa7.44□□□□□ -1.22
CACNA1A-242ENST00000637485 APOC4P55056 127 aa7.44□□□□□ -1.22
CACNA1A-242ENST00000637485 NEXN-AS1Q8NBZ9 246 aa7.44□□□□□ -1.22
CACNA1A-242ENST00000637485 TRBV7-3A0A075B6L6 115 aa7.44□□□□□ -1.22
CACNA1A-242ENST00000637485 RUSC1-AS1Q66K80 236 aa7.44□□□□□ -1.22
CACNA1A-242ENST00000637485 SHISA2Q6UWI4 295 aa7.44□□□□□ -1.22
CACNA1A-242ENST00000637485 RNF114Q9Y508 228 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms