RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 Q6YL49 198 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 C9orf139Q6ZV77 190 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 NUP37Q8NFH4 326 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 ITLN2Q8WWU7 325 aaPredicted RBP6.33□□□□□ -1.4
SMN2-214ENST00000626847 LINC00476Q8WZB0 136 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 CYYR1Q96J86 154 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 KRTAP3-1Q9BYR8 98 aa6.33□□□□□ -1.4
SMN2-214ENST00000626847 IGLV3-10A0A075B6K4 115 aa6.32□□□□□ -1.4
SMN2-214ENST00000626847 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.32□□□□□ -1.4
SMN2-214ENST00000626847 TRAV3A0A0B4J244 114 aa6.32□□□□□ -1.4
SMN2-214ENST00000626847 TRBV30A0A0K0K1B3 111 aa6.32□□□□□ -1.4
SMN2-214ENST00000626847 TEX49A0A1B0GTD5 131 aa6.32□□□□□ -1.4
SMN2-214ENST00000626847 TIMM17BO60830 172 aa6.32□□□□□ -1.4
SMN2-214ENST00000626847 COX6CP09669 75 aa6.32□□□□□ -1.4
SMN2-214ENST00000626847 RPS18P62269 152 aaKnown RBP6.32□□□□□ -1.4
SMN2-214ENST00000626847 HOXA4Q00056 320 aaPredicted RBP6.32□□□□□ -1.4
SMN2-214ENST00000626847 WDR86Q86TI4 376 aa6.32□□□□□ -1.4
SMN2-214ENST00000626847 CXXC4Q9H2H0 198 aa6.32□□□□□ -1.4
SMN2-214ENST00000626847 RPP21Q9H633 154 aaKnown RBP6.32□□□□□ -1.4
SMN2-214ENST00000626847 MOB4Q9Y3A3 225 aa6.32□□□□□ -1.4
SMN2-214ENST00000626847 LSM4Q9Y4Z0 139 aaKnown RBP6.32□□□□□ -1.4
SMN2-214ENST00000626847 U3KQK5 164 aa6.32□□□□□ -1.4
SMN2-214ENST00000626847 IGKV2D-26A0A0A0MRZ7 120 aa6.31□□□□□ -1.4
SMN2-214ENST00000626847 H3BP45 60 aa6.31□□□□□ -1.4
SMN2-214ENST00000626847 PIRTP0C851 137 aa6.31□□□□□ -1.4
SMN2-214ENST00000626847 ECSCRQ19T08 205 aa6.31□□□□□ -1.4
SMN2-214ENST00000626847 Q6JHZ5 121 aa6.31□□□□□ -1.4
SMN2-214ENST00000626847 Q6ZR03 302 aa6.31□□□□□ -1.4
SMN2-214ENST00000626847 Q8N8P6 123 aa6.31□□□□□ -1.4
SMN2-214ENST00000626847 PRR26Q8N8Z3 221 aa6.31□□□□□ -1.4
SMN2-214ENST00000626847 NABP2Q9BQ15 211 aa6.31□□□□□ -1.4
SMN2-214ENST00000626847 SLC50A1Q9BRV3 221 aa6.31□□□□□ -1.4
SMN2-214ENST00000626847 MYO7BQ6PIF6 2116 aa6.3□□□□□ -1.4
SMN2-214ENST00000626847 NCOA6Q14686 2063 aaPredicted RBP6.3□□□□□ -1.4
SMN2-214ENST00000626847 IGLV3-16A0A075B6K0 115 aa6.3□□□□□ -1.4
SMN2-214ENST00000626847 IGKV1D-8A0A087WSZ0 117 aa6.3□□□□□ -1.4
SMN2-214ENST00000626847 TRBV7-1A0A0A6YYK4 115 aa6.3□□□□□ -1.4
SMN2-214ENST00000626847 TRAV41A0A0B4J266 112 aa6.3□□□□□ -1.4
SMN2-214ENST00000626847 RBMY1BA6NDE4 496 aaKnown RBP6.3□□□□□ -1.4
SMN2-214ENST00000626847 RBMY1EA6NEQ0 496 aaKnown RBP6.3□□□□□ -1.4
SMN2-214ENST00000626847 LINC01548A6NM66 108 aa6.3□□□□□ -1.4
SMN2-214ENST00000626847 PMS2P5A8MQ11 134 aa6.3□□□□□ -1.4
SMN2-214ENST00000626847 RBMY1DP0C7P1 496 aaKnown RBP6.3□□□□□ -1.4
SMN2-214ENST00000626847 RBMY1A1P0DJD3 496 aaKnown RBP6.3□□□□□ -1.4
SMN2-214ENST00000626847 RBMY1CP0DJD4 496 aa6.3□□□□□ -1.4
SMN2-214ENST00000626847 IAPPP10997 89 aa6.3□□□□□ -1.4
SMN2-214ENST00000626847 CKS2P33552 79 aa6.3□□□□□ -1.4
SMN2-214ENST00000626847 RPS21P63220 83 aaKnown RBP6.3□□□□□ -1.4
SMN2-214ENST00000626847 RBMY1FQ15415 496 aaKnown RBP6.3□□□□□ -1.4
SMN2-214ENST00000626847 C17orf77Q96MU5 243 aa6.3□□□□□ -1.4
SMN2-214ENST00000626847 SMR3AQ99954 134 aa6.3□□□□□ -1.4
SMN2-214ENST00000626847 ZNF355PQ9NSJ1 428 aa6.3□□□□□ -1.4
SMN2-214ENST00000626847 ZGRF1Q86YA3 2104 aa6.3□□□□□ -1.4
SMN2-214ENST00000626847 NSD1Q96L73 2696 aaPredicted RBP6.29□□□□□ -1.4
SMN2-214ENST00000626847 A0A096LNJ9 63 aa6.29□□□□□ -1.4
SMN2-214ENST00000626847 WI2-2373I1.2A0A1W2PRP0 233 aa6.29□□□□□ -1.4
SMN2-214ENST00000626847 CCKP06307 115 aa6.29□□□□□ -1.4
SMN2-214ENST00000626847 CFC1BP0CG36 223 aa6.29□□□□□ -1.4
SMN2-214ENST00000626847 CFC1P0CG37 223 aa6.29□□□□□ -1.4
SMN2-214ENST00000626847 INAFM2P0DMQ5 153 aa6.29□□□□□ -1.4
SMN2-214ENST00000626847 RNASE2P10153 161 aaKnown RBP6.29□□□□□ -1.4
SMN2-214ENST00000626847 PAX8Q06710 450 aa6.29□□□□□ -1.4
SMN2-214ENST00000626847 KRTAP27-1Q3LI81 207 aa6.29□□□□□ -1.4
SMN2-214ENST00000626847 DOCK11Q5JSL3 2073 aa6.28□□□□□ -1.4
SMN2-214ENST00000626847 VPS13CQ709C8 3753 aa6.28□□□□□ -1.4
SMN2-214ENST00000626847 IBA57-AS1B1ANH7 110 aa6.28□□□□□ -1.4
SMN2-214ENST00000626847 C19orf84I3L1E1 186 aa6.28□□□□□ -1.4
SMN2-214ENST00000626847 IGKV1D-16P01601 117 aa6.28□□□□□ -1.4
SMN2-214ENST00000626847 PRSS1P07477 247 aa6.28□□□□□ -1.4
SMN2-214ENST00000626847 CD177Q8N6Q3 437 aa6.28□□□□□ -1.4
SMN2-214ENST00000626847 TMEM75Q8N9X5 138 aa6.28□□□□□ -1.4
SMN2-214ENST00000626847 FDCSPQ8NFU4 85 aa6.28□□□□□ -1.4
SMN2-214ENST00000626847 TSACCQ96A04 125 aaPredicted RBP6.28□□□□□ -1.4
SMN2-214ENST00000626847 CUBNO60494 3623 aa6.28□□□□□ -1.4
SMN2-214ENST00000626847 SCN3AQ9NY46 2000 aa6.28□□□□□ -1.4
SMN2-214ENST00000626847 TRAV12-1A0A0B4J245 112 aa6.27□□□□□ -1.41
SMN2-214ENST00000626847 SPRY3O43610 288 aa6.27□□□□□ -1.41
SMN2-214ENST00000626847 MAPKAPK5-AS1Q8N8E1 139 aa6.27□□□□□ -1.41
SMN2-214ENST00000626847 NBEAL2Q6ZNJ1 2754 aa6.27□□□□□ -1.41
SMN2-214ENST00000626847 MDC1Q14676 2089 aaKnown RBP6.27□□□□□ -1.41
SMN2-214ENST00000626847 A0A1B0GUT8 65 aa6.26□□□□□ -1.41
SMN2-214ENST00000626847 C8orf87E5RJ46 101 aa6.26□□□□□ -1.41
SMN2-214ENST00000626847 IGHV3-33P01772 117 aa6.26□□□□□ -1.41
SMN2-214ENST00000626847 XCL1P47992 114 aa6.26□□□□□ -1.41
SMN2-214ENST00000626847 TFF3Q07654 80 aa6.26□□□□□ -1.41
SMN2-214ENST00000626847 KLKP1Q107X0 134 aa6.26□□□□□ -1.41
SMN2-214ENST00000626847 FHL2Q14192 279 aa6.26□□□□□ -1.41
SMN2-214ENST00000626847 ATP5EP2Q5VTU8 51 aa6.26□□□□□ -1.41
SMN2-214ENST00000626847 HIST2H2BDQ6DRA6 164 aa6.26□□□□□ -1.41
SMN2-214ENST00000626847 ORMDL3Q8N138 153 aa6.26□□□□□ -1.41
SMN2-214ENST00000626847 CYSTM1Q9H1C7 97 aa6.26□□□□□ -1.41
SMN2-214ENST00000626847 C11orf68Q9H3H3 251 aaKnown RBP6.26□□□□□ -1.41
SMN2-214ENST00000626847 Q9H8V8 135 aa6.26□□□□□ -1.41
SMN2-214ENST00000626847 XCL2Q9UBD3 114 aa6.26□□□□□ -1.41
SMN2-214ENST00000626847 FER1L5A0AVI2 2057 aa6.26□□□□□ -1.41
SMN2-214ENST00000626847 FLNAP21333 2647 aaKnown RBP6.26□□□□□ -1.41
SMN2-214ENST00000626847 A0A1W2PQD3 144 aa6.25□□□□□ -1.41
SMN2-214ENST00000626847 SRRM4A7MD48 611 aaKnown RBP6.25□□□□□ -1.41
SMN2-214ENST00000626847 H3BSH0 61 aa6.25□□□□□ -1.41
SMN2-214ENST00000626847 IGLV3-27P01718 113 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms