RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 TRDV1A0A1B0GX56 115 aa0.47□□□□□ -2.33
CDKL5-207ENST00000624700 C5orf58C9J3I9 102 aa0.47□□□□□ -2.33
CDKL5-207ENST00000624700 DIRC1Q969H9 104 aa0.47□□□□□ -2.33
CDKL5-207ENST00000624700 RMND5BQ96G75 393 aaPredicted RBP0.47□□□□□ -2.33
CDKL5-207ENST00000624700 MED11Q9P086 117 aa0.47□□□□□ -2.33
CDKL5-207ENST00000624700 LAMTOR2Q9Y2Q5 125 aa0.47□□□□□ -2.33
CDKL5-207ENST00000624700 TRRAPQ9Y4A5 3859 aa0.47□□□□□ -2.33
CDKL5-207ENST00000624700 CFTRP13569 1480 aa0.47□□□□□ -2.33
CDKL5-207ENST00000624700 IGHV3-30P01768 117 aa0.46□□□□□ -2.34
CDKL5-207ENST00000624700 TRACP01848 142 aa0.46□□□□□ -2.34
CDKL5-207ENST00000624700 IGHV3-30-5P0DP03 117 aa0.46□□□□□ -2.34
CDKL5-207ENST00000624700 NDUFA6P56556 154 aa0.46□□□□□ -2.34
CDKL5-207ENST00000624700 TRIQKQ629K1 86 aa0.46□□□□□ -2.34
CDKL5-207ENST00000624700 ZCCHC23Q6ZST2 131 aa0.46□□□□□ -2.34
CDKL5-207ENST00000624700 Q86TA4 180 aa0.46□□□□□ -2.34
CDKL5-207ENST00000624700 ANGPTL5Q86XS5 388 aa0.46□□□□□ -2.34
CDKL5-207ENST00000624700 DYDC1Q8WWB3 177 aa0.46□□□□□ -2.34
CDKL5-207ENST00000624700 NAT8BQ9UHF3 227 aa0.46□□□□□ -2.34
CDKL5-207ENST00000624700 MLH3Q9UHC1 1453 aa0.46□□□□□ -2.34
CDKL5-207ENST00000624700 CUL7Q14999 1698 aa0.46□□□□□ -2.34
CDKL5-207ENST00000624700 KNL1Q8NG31 2342 aa0.46□□□□□ -2.34
CDKL5-207ENST00000624700 TMEM238C9JI98 176 aa0.45□□□□□ -2.34
CDKL5-207ENST00000624700 SULT1C4O75897 302 aa0.45□□□□□ -2.34
CDKL5-207ENST00000624700 GLRXP35754 106 aa0.45□□□□□ -2.34
CDKL5-207ENST00000624700 C10orf99Q6UWK7 81 aa0.45□□□□□ -2.34
CDKL5-207ENST00000624700 CCL19Q99731 98 aa0.45□□□□□ -2.34
CDKL5-207ENST00000624700 LIMD2Q9BT23 127 aa0.45□□□□□ -2.34
CDKL5-207ENST00000624700 OTORQ9NRC9 128 aa0.45□□□□□ -2.34
CDKL5-207ENST00000624700 IL20Q9NYY1 176 aa0.45□□□□□ -2.34
CDKL5-207ENST00000624700 PXDNQ92626 1479 aa0.45□□□□□ -2.34
CDKL5-207ENST00000624700 WNK2Q9Y3S1 2297 aa0.45□□□□□ -2.34
CDKL5-207ENST00000624700 FAT2Q9NYQ8 4349 aa0.45□□□□□ -2.34
CDKL5-207ENST00000624700 TANC2Q9HCD6 1990 aa0.45□□□□□ -2.34
CDKL5-207ENST00000624700 LOC285556D6RIA3 1793 aa0.45□□□□□ -2.34
CDKL5-207ENST00000624700 SSC5DA1L4H1 1573 aa0.45□□□□□ -2.34
CDKL5-207ENST00000624700 NINQ8N4C6 2090 aa0.44□□□□□ -2.34
CDKL5-207ENST00000624700 CTTNBP2Q8WZ74 1663 aa0.44□□□□□ -2.34
CDKL5-207ENST00000624700 FAT1Q14517 4588 aa0.44□□□□□ -2.34
CDKL5-207ENST00000624700 FAM107AO95990 144 aa0.44□□□□□ -2.34
CDKL5-207ENST00000624700 SAA1P0DJI8 122 aaPredicted RBP0.44□□□□□ -2.34
CDKL5-207ENST00000624700 BCL2P10415 239 aa0.44□□□□□ -2.34
CDKL5-207ENST00000624700 FABP2P12104 132 aa0.44□□□□□ -2.34
CDKL5-207ENST00000624700 CAV3P56539 151 aa0.44□□□□□ -2.34
CDKL5-207ENST00000624700 NEDD8Q15843 81 aa0.44□□□□□ -2.34
CDKL5-207ENST00000624700 CCSMST1Q4G0I0 132 aa0.44□□□□□ -2.34
CDKL5-207ENST00000624700 IZUMO2Q6UXV1 221 aa0.44□□□□□ -2.34
CDKL5-207ENST00000624700 CDC26Q8NHZ8 85 aa0.44□□□□□ -2.34
CDKL5-207ENST00000624700 CIB3Q96Q77 187 aaPredicted RBP0.44□□□□□ -2.34
CDKL5-207ENST00000624700 HOPXQ9BPY8 73 aaPredicted RBP0.44□□□□□ -2.34
CDKL5-207ENST00000624700 LRTM1Q9HBL6 345 aa0.44□□□□□ -2.34
CDKL5-207ENST00000624700 GID8Q9NWU2 228 aa0.44□□□□□ -2.34
CDKL5-207ENST00000624700 ANK3Q12955 4377 aaKnown RBP0.44□□□□□ -2.34
CDKL5-207ENST00000624700 PLECQ15149 4684 aaKnown RBP0.43□□□□□ -2.34
CDKL5-207ENST00000624700 LCE6AA0A183 80 aa0.43□□□□□ -2.34
CDKL5-207ENST00000624700 TPT1P13693 172 aaKnown RBP0.43□□□□□ -2.34
CDKL5-207ENST00000624700 SRP9P49458 86 aaKnown RBP0.43□□□□□ -2.34
CDKL5-207ENST00000624700 QRFPP83859 136 aa0.43□□□□□ -2.34
CDKL5-207ENST00000624700 DCUN1D2Q6PH85 259 aa0.43□□□□□ -2.34
CDKL5-207ENST00000624700 OR5H6Q8NGV6 325 aa0.43□□□□□ -2.34
CDKL5-207ENST00000624700 TSKUQ8WUA8 353 aa0.43□□□□□ -2.34
CDKL5-207ENST00000624700 LPAR5Q9H1C0 372 aa0.43□□□□□ -2.34
CDKL5-207ENST00000624700 ATPIF1Q9UII2 106 aa0.43□□□□□ -2.34
CDKL5-207ENST00000624700 PPIP5K1Q6PFW1 1433 aa0.43□□□□□ -2.34
CDKL5-207ENST00000624700 TRPM7Q96QT4 1865 aa0.43□□□□□ -2.34
CDKL5-207ENST00000624700 SCN11AQ9UI33 1791 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 LAMC1P11047 1609 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 GOLGA3Q08378 1498 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 MAGI2Q86UL8 1455 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 RAPGEF2Q9Y4G8 1499 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 FMN2Q9NZ56 1722 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 C3orf85A0A1B0GTC6 90 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 MAP1LC3B2A6NCE7 125 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 ARL5CA6NH57 179 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 SPRR2EP22531 72 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 SDC2P34741 201 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 SPRR2BP35325 72 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 SPRR2AP35326 72 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 MAXP61244 160 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 SPINK13Q1W4C9 94 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 PLAC4Q8WY50 150 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 PRELID3AQ96N28 172 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 CCDC32Q9BV29 185 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 PKHD1L1Q86WI1 4243 aa0.42□□□□□ -2.34
CDKL5-207ENST00000624700 FER1L6Q2WGJ9 1857 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 PKD1L3Q7Z443 1732 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 DNMBPQ6XZF7 1577 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 AKAP6Q13023 2319 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 PLCE1Q9P212 2302 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 MYH1P12882 1939 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 LOC107986453A0A1B0GWG9 222 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 PRORSD1PA6NEY8 169 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 BBIP1A8MTZ0 92 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 E7EQ34 232 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 GABARAPH6UMI1 98 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 GYPBP06028 91 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 SPRR2DP22532 72 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 RPS3P23396 243 aaKnown RBP eCLIP0.41□□□□□ -2.34
CDKL5-207ENST00000624700 DNAJB13P59910 316 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 TMEM78Q5T7P6 136 aa0.41□□□□□ -2.34
CDKL5-207ENST00000624700 XAF1Q6GPH4 301 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms