RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 HIST1H2BBP33778 126 aa11.46□□□□□ -0.57
CD40-207ENST00000620709 HIST1H2BDP58876 126 aa11.46□□□□□ -0.57
CD40-207ENST00000620709 HIST1H2BCP62807 126 aa11.46□□□□□ -0.57
CD40-207ENST00000620709 CACNG7P62955 275 aa11.46□□□□□ -0.57
CD40-207ENST00000620709 HIST2H2BEQ16778 126 aa11.46□□□□□ -0.57
CD40-207ENST00000620709 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.46□□□□□ -0.57
CD40-207ENST00000620709 HIST1H2BHQ93079 126 aa11.46□□□□□ -0.57
CD40-207ENST00000620709 HIST1H2BNQ99877 126 aa11.46□□□□□ -0.57
CD40-207ENST00000620709 HIST1H2BMQ99879 126 aa11.46□□□□□ -0.57
CD40-207ENST00000620709 TRGV11A0A075B6L2 103 aa11.45□□□□□ -0.58
CD40-207ENST00000620709 MUC21A0A0G2JKD1 596 aa11.45□□□□□ -0.58
CD40-207ENST00000620709 MUC21A0A140T8X8 626 aa11.45□□□□□ -0.58
CD40-207ENST00000620709 GNRH2O43555 120 aa11.45□□□□□ -0.58
CD40-207ENST00000620709 NTF3P20783 257 aa11.45□□□□□ -0.58
CD40-207ENST00000620709 TWIST1Q15672 202 aa11.45□□□□□ -0.58
CD40-207ENST00000620709 FAM222AQ5U5X8 452 aa11.45□□□□□ -0.58
CD40-207ENST00000620709 S100A6P06703 90 aa11.45□□□□□ -0.58
CD40-207ENST00000620709 SLAQ13239 276 aa11.45□□□□□ -0.58
CD40-207ENST00000620709 SPANXN1Q5VSR9 72 aa11.45□□□□□ -0.58
CD40-207ENST00000620709 ZNF493Q6ZR52 646 aa11.45□□□□□ -0.58
CD40-207ENST00000620709 OR10AG1Q8NH19 301 aa11.45□□□□□ -0.58
CD40-207ENST00000620709 SCRT2Q9NQ03 307 aa11.45□□□□□ -0.58
CD40-207ENST00000620709 TIMM8BQ9Y5J9 83 aaPredicted RBP11.45□□□□□ -0.58
CD40-207ENST00000620709 M0R2N4 97 aa11.44□□□□□ -0.58
CD40-207ENST00000620709 P0DMU3 169 aa11.44□□□□□ -0.58
CD40-207ENST00000620709 FAM231AP0DMU4 169 aa11.44□□□□□ -0.58
CD40-207ENST00000620709 FAM231CP0DMU5 169 aa11.44□□□□□ -0.58
CD40-207ENST00000620709 RNASE3P12724 160 aaKnown RBP11.44□□□□□ -0.58
CD40-207ENST00000620709 SSTP61278 116 aa11.44□□□□□ -0.58
CD40-207ENST00000620709 C1orf158Q8N1D5 194 aa11.44□□□□□ -0.58
CD40-207ENST00000620709 TMEM256Q8N2U0 113 aa11.44□□□□□ -0.58
CD40-207ENST00000620709 LINC00467Q9BRT7 94 aa11.44□□□□□ -0.58
CD40-207ENST00000620709 DKK2Q9UBU2 259 aa11.44□□□□□ -0.58
CD40-207ENST00000620709 PHLDA3Q9Y5J5 127 aa11.44□□□□□ -0.58
CD40-207ENST00000620709 DNAH2Q9P225 4427 aa11.43□□□□□ -0.58
CD40-207ENST00000620709 IGHV3-16A0A0C4DH30 117 aa11.43□□□□□ -0.58
CD40-207ENST00000620709 CBY3A6NI87 242 aa11.43□□□□□ -0.58
CD40-207ENST00000620709 RRN3P1Q2M238 152 aa11.43□□□□□ -0.58
CD40-207ENST00000620709 UBE2DNLQ8IWF7 75 aa11.43□□□□□ -0.58
CD40-207ENST00000620709 KIAA1644Q3SXP7 199 aa11.42□□□□□ -0.58
CD40-207ENST00000620709 POM121L12Q8N7R1 296 aa11.42□□□□□ -0.58
CD40-207ENST00000620709 LINC01587Q99440 93 aa11.42□□□□□ -0.58
CD40-207ENST00000620709 TP53TG3Q9ULZ0 132 aa11.42□□□□□ -0.58
CD40-207ENST00000620709 TEX48A0A1B0GUV7 120 aa11.41□□□□□ -0.58
CD40-207ENST00000620709 SMIM15Q7Z3B0 74 aa11.41□□□□□ -0.58
CD40-207ENST00000620709 C9orf85Q96MD7 179 aa11.41□□□□□ -0.58
CD40-207ENST00000620709 TMEM191AQ9H0A3 160 aa11.41□□□□□ -0.58
CD40-207ENST00000620709 MSRB1Q9NZV6 116 aa11.41□□□□□ -0.58
CD40-207ENST00000620709 NXPH4O95158 308 aa11.4□□□□□ -0.58
CD40-207ENST00000620709 PRM2P04554 102 aa11.4□□□□□ -0.58
CD40-207ENST00000620709 NDUFA6P56556 154 aa11.4□□□□□ -0.58
CD40-207ENST00000620709 DAD1P61803 113 aa11.4□□□□□ -0.58
CD40-207ENST00000620709 M0R381 172 aa11.4□□□□□ -0.59
CD40-207ENST00000620709 HTN1P15515 57 aa11.4□□□□□ -0.59
CD40-207ENST00000620709 SRIP30626 198 aa11.4□□□□□ -0.59
CD40-207ENST00000620709 FAM104BQ5XKR9 115 aa11.4□□□□□ -0.59
CD40-207ENST00000620709 MDFICQ9P1T7 246 aa11.4□□□□□ -0.59
CD40-207ENST00000620709 DNAH17Q9UFH2 4485 aa11.39□□□□□ -0.59
CD40-207ENST00000620709 HERC2O95714 4834 aa11.39□□□□□ -0.59
CD40-207ENST00000620709 FAT2Q9NYQ8 4349 aa11.39□□□□□ -0.59
CD40-207ENST00000620709 IGLV2-18A0A075B6J9 118 aa11.39□□□□□ -0.59
CD40-207ENST00000620709 ZNF415Q09FC8 603 aa11.39□□□□□ -0.59
CD40-207ENST00000620709 DMRTA1Q5VZB9 504 aa11.39□□□□□ -0.59
CD40-207ENST00000620709 SNRPEP62304 92 aaKnown RBP11.38□□□□□ -0.59
CD40-207ENST00000620709 AMN1Q8IY45 258 aa11.38□□□□□ -0.59
CD40-207ENST00000620709 SYT8Q8NBV8 401 aa11.38□□□□□ -0.59
CD40-207ENST00000620709 AP1S3Q96PC3 154 aa11.38□□□□□ -0.59
CD40-207ENST00000620709 C5orf52A6NGY3 159 aa11.37□□□□□ -0.59
CD40-207ENST00000620709 ALKBH7Q9BT30 221 aaPredicted RBP11.37□□□□□ -0.59
CD40-207ENST00000620709 Q0VG73 95 aa11.36□□□□□ -0.59
CD40-207ENST00000620709 OR10J3Q5JRS4 329 aa11.36□□□□□ -0.59
CD40-207ENST00000620709 COA6Q5JTJ3 125 aaKnown RBP11.36□□□□□ -0.59
CD40-207ENST00000620709 LINC00336Q6ZUF6 198 aa11.36□□□□□ -0.59
CD40-207ENST00000620709 DEFB130BP0DP73 79 aa11.35□□□□□ -0.59
CD40-207ENST00000620709 DEFB130AP0DP74 79 aa11.35□□□□□ -0.59
CD40-207ENST00000620709 EVI2AP22794 236 aa11.35□□□□□ -0.59
CD40-207ENST00000620709 MRPL51Q4U2R6 128 aaKnown RBP11.35□□□□□ -0.59
CD40-207ENST00000620709 RNF185Q96GF1 192 aa11.35□□□□□ -0.59
CD40-207ENST00000620709 DPH3P1Q9H4G8 78 aa11.35□□□□□ -0.59
CD40-207ENST00000620709 RAB4AP20338 218 aa11.35□□□□□ -0.59
CD40-207ENST00000620709 C11orf72Q8NBR9 251 aa11.35□□□□□ -0.59
CD40-207ENST00000620709 SPXQ9BT56 116 aa11.35□□□□□ -0.59
CD40-207ENST00000620709 LOC105371267A0A1B0GV96 52 aa11.34□□□□□ -0.59
CD40-207ENST00000620709 PRSS29PA6NIE9 313 aa11.34□□□□□ -0.59
CD40-207ENST00000620709 D6R8Y8 96 aa11.34□□□□□ -0.59
CD40-207ENST00000620709 AZU1P20160 251 aa11.34□□□□□ -0.59
CD40-207ENST00000620709 HOXA5P20719 270 aa11.34□□□□□ -0.59
CD40-207ENST00000620709 ORMDL3Q8N138 153 aa11.34□□□□□ -0.59
CD40-207ENST00000620709 C18orf32Q8TCD1 76 aa11.34□□□□□ -0.59
CD40-207ENST00000620709 M0R2P5 195 aa11.33□□□□□ -0.6
CD40-207ENST00000620709 PPBPP02775 128 aa11.33□□□□□ -0.6
CD40-207ENST00000620709 SMIM17P0DL12 118 aa11.33□□□□□ -0.6
CD40-207ENST00000620709 CKS2P33552 79 aa11.33□□□□□ -0.6
CD40-207ENST00000620709 BAGE3Q86Y29 109 aa11.33□□□□□ -0.6
CD40-207ENST00000620709 TMEM263Q8WUH6 116 aaKnown RBP11.33□□□□□ -0.6
CD40-207ENST00000620709 PTH2Q96A98 100 aa11.33□□□□□ -0.6
CD40-207ENST00000620709 GSN-AS1Q9NRJ2 163 aa11.33□□□□□ -0.6
CD40-207ENST00000620709 MUC4Q99102 2169 aa11.33□□□□□ -0.6
CD40-207ENST00000620709 PKHD1P08F94 4074 aa11.32□□□□□ -0.6
CD40-207ENST00000620709 LYRM9A8MSI8 78 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms