RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 SEC16AO15027 2179 aa2.6□□□□□ -1.99
LINC00343-211ENST00000608426 C1orf167Q5SNV9 1468 aa2.6□□□□□ -1.99
LINC00343-211ENST00000608426 RGPD2P0DJD1 1756 aa2.6□□□□□ -1.99
LINC00343-211ENST00000608426 KCPQ6ZWJ8 1503 aa2.6□□□□□ -1.99
LINC00343-211ENST00000608426 LECT2O14960 151 aa2.6□□□□□ -1.99
LINC00343-211ENST00000608426 NDUFC1O43677 76 aa2.6□□□□□ -1.99
LINC00343-211ENST00000608426 SH2D1AO60880 128 aa2.6□□□□□ -1.99
LINC00343-211ENST00000608426 IGKV1D-33P01593 117 aa2.6□□□□□ -1.99
LINC00343-211ENST00000608426 IGKV1-33P01594 117 aa2.6□□□□□ -1.99
LINC00343-211ENST00000608426 TRGV3P03979 118 aa2.6□□□□□ -1.99
LINC00343-211ENST00000608426 MSMBP08118 114 aa2.6□□□□□ -1.99
LINC00343-211ENST00000608426 SNRPFP62306 86 aaKnown RBP2.6□□□□□ -1.99
LINC00343-211ENST00000608426 SPANXN1Q5VSR9 72 aa2.6□□□□□ -1.99
LINC00343-211ENST00000608426 SMCR5Q8TEV8 140 aa2.6□□□□□ -1.99
LINC00343-211ENST00000608426 LINC01600Q96MT4 127 aa2.6□□□□□ -1.99
LINC00343-211ENST00000608426 LINC00467Q9BRT7 94 aa2.6□□□□□ -1.99
LINC00343-211ENST00000608426 MRPL35Q9NZE8 188 aaKnown RBP2.6□□□□□ -1.99
LINC00343-211ENST00000608426 SDK2Q58EX2 2172 aa2.6□□□□□ -1.99
LINC00343-211ENST00000608426 RGPD1P0DJD0 1748 aa2.59□□□□□ -1.99
LINC00343-211ENST00000608426 GLI2P10070 1586 aa2.59□□□□□ -1.99
LINC00343-211ENST00000608426 IGHV1-3A0A0C4DH29 117 aa2.59□□□□□ -1.99
LINC00343-211ENST00000608426 C19orf71A6NCJ1 209 aa2.59□□□□□ -1.99
LINC00343-211ENST00000608426 GNRH2O43555 120 aa2.59□□□□□ -1.99
LINC00343-211ENST00000608426 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
LINC00343-211ENST00000608426 ASAH2BP0C7U1 165 aa2.59□□□□□ -1.99
LINC00343-211ENST00000608426 KRTAP12-4P60329 112 aa2.59□□□□□ -1.99
LINC00343-211ENST00000608426 SMIM5Q71RC9 77 aa2.59□□□□□ -1.99
LINC00343-211ENST00000608426 Q96M85 177 aa2.59□□□□□ -1.99
LINC00343-211ENST00000608426 ODF3Q96PU9 254 aa2.59□□□□□ -1.99
LINC00343-211ENST00000608426 SLC50A1Q9BRV3 221 aa2.59□□□□□ -1.99
LINC00343-211ENST00000608426 HIGD1BQ9P298 99 aa2.59□□□□□ -1.99
LINC00343-211ENST00000608426 LINC00474Q9P2X8 69 aa2.59□□□□□ -1.99
LINC00343-211ENST00000608426 TRIOBPQ9H2D6 2365 aa2.59□□□□□ -2
LINC00343-211ENST00000608426 RGPD8O14715 1765 aaPredicted RBP2.59□□□□□ -2
LINC00343-211ENST00000608426 RGPD5Q99666 1765 aa2.59□□□□□ -2
LINC00343-211ENST00000608426 ARFGEF2Q9Y6D5 1785 aa2.59□□□□□ -2
LINC00343-211ENST00000608426 NKTRP30414 1462 aaKnown RBP2.58□□□□□ -2
LINC00343-211ENST00000608426 CDK13Q14004 1512 aaKnown RBP2.58□□□□□ -2
LINC00343-211ENST00000608426 LOC107984156A0A0G2JMH3 177 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 hDV103S1A0JD37 113 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 CRYM-AS1A6NIL9 109 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 IGLV1-51P01701 117 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 IGHV1-46P01743 117 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 ACYP1P07311 99 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 CXCL8P10145 99 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 RPL28P46779 137 aaKnown RBP2.58□□□□□ -2
LINC00343-211ENST00000608426 UBE2G1P62253 170 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 SDIM1Q6ZPB5 146 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 ARL17AQ8IVW1 177 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 LINC00269Q8N2A0 174 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 Q8N814 137 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 DYNLRB2Q8TF09 96 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 TMEM141Q96I45 108 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 SMIM7Q9BQ49 75 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 NHP2Q9NX24 153 aaKnown RBP2.58□□□□□ -2
LINC00343-211ENST00000608426 NDUFA12Q9UI09 145 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 V9GYH0 126 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 ITSN1Q15811 1721 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 XRN1Q8IZH2 1706 aaKnown RBP2.58□□□□□ -2
LINC00343-211ENST00000608426 PTPRDP23468 1912 aa2.58□□□□□ -2
LINC00343-211ENST00000608426 IGHV3-73A0A0B4J1V6 119 aa2.57□□□□□ -2
LINC00343-211ENST00000608426 A0A1W2PNN7 141 aa2.57□□□□□ -2
LINC00343-211ENST00000608426 F2Z2F3 143 aa2.57□□□□□ -2
LINC00343-211ENST00000608426 H3BMM0 161 aa2.57□□□□□ -2
LINC00343-211ENST00000608426 CPSF4O95639 269 aaKnown RBP2.57□□□□□ -2
LINC00343-211ENST00000608426 Q8IYB0 196 aa2.57□□□□□ -2
LINC00343-211ENST00000608426 DYNAPQ8N1N2 210 aa2.57□□□□□ -2
LINC00343-211ENST00000608426 RPRMLQ8N4K4 120 aa2.57□□□□□ -2
LINC00343-211ENST00000608426 Q8NDZ9 215 aa2.57□□□□□ -2
LINC00343-211ENST00000608426 UBE2WQ96B02 151 aa2.57□□□□□ -2
LINC00343-211ENST00000608426 CYSTM1Q9H1C7 97 aa2.57□□□□□ -2
LINC00343-211ENST00000608426 U3KQK5 164 aa2.57□□□□□ -2
LINC00343-211ENST00000608426 SHROOM2Q13796 1616 aa2.57□□□□□ -2
LINC00343-211ENST00000608426 MYO3AQ8NEV4 1616 aa2.57□□□□□ -2
LINC00343-211ENST00000608426 CLTCQ00610 1675 aaKnown RBP2.57□□□□□ -2
LINC00343-211ENST00000608426 BTAF1O14981 1849 aa2.56□□□□□ -2
LINC00343-211ENST00000608426 MICAL3Q7RTP6 2002 aa2.56□□□□□ -2
LINC00343-211ENST00000608426 IGKV2D-26A0A0A0MRZ7 120 aa2.56□□□□□ -2
LINC00343-211ENST00000608426 TRAV13-2A0A0B4J235 113 aa2.56□□□□□ -2
LINC00343-211ENST00000608426 TCRBV4S1A1TA0A5B7 111 aa2.56□□□□□ -2
LINC00343-211ENST00000608426 B4DSR2 109 aa2.56□□□□□ -2
LINC00343-211ENST00000608426 XCL1P47992 114 aa2.56□□□□□ -2
LINC00343-211ENST00000608426 EFNA4P52798 201 aa2.56□□□□□ -2
LINC00343-211ENST00000608426 SMIM11AP58511 58 aa2.56□□□□□ -2
LINC00343-211ENST00000608426 ESRGQ1W209 222 aa2.56□□□□□ -2
LINC00343-211ENST00000608426 TMEM170BQ5T4T1 132 aa2.56□□□□□ -2
LINC00343-211ENST00000608426 RPL7L1Q6DKI1 246 aaKnown RBP2.56□□□□□ -2
LINC00343-211ENST00000608426 CYP2G1PQ6ZSU1 146 aa2.56□□□□□ -2
LINC00343-211ENST00000608426 C2orf91Q6ZV80 131 aa2.56□□□□□ -2
LINC00343-211ENST00000608426 LINC00643Q86TS7 51 aa2.56□□□□□ -2
LINC00343-211ENST00000608426 COL5A3P25940 1745 aaPredicted RBP2.56□□□□□ -2
LINC00343-211ENST00000608426 PLXNA3P51805 1871 aa2.56□□□□□ -2
LINC00343-211ENST00000608426 IGHV3-15A0A0B4J1V0 119 aa2.55□□□□□ -2
LINC00343-211ENST00000608426 UNC13BO14795 1591 aa2.55□□□□□ -2
LINC00343-211ENST00000608426 BCE1O60756 84 aa2.55□□□□□ -2
LINC00343-211ENST00000608426 LHBP01229 141 aa2.55□□□□□ -2
LINC00343-211ENST00000608426 LAMB1P07942 1786 aa2.55□□□□□ -2
LINC00343-211ENST00000608426 CD24P25063 80 aa2.55□□□□□ -2
LINC00343-211ENST00000608426 ZNF117Q03924 483 aa2.55□□□□□ -2
LINC00343-211ENST00000608426 CDC42BPAQ5VT25 1732 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms