RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 C16orf54Q6UWD8 224 aa9.16□□□□□ -0.94
SCN8A-208ENST00000599343 TEN1Q86WV5 123 aa9.16□□□□□ -0.94
SCN8A-208ENST00000599343 IGLV11-55A0A075B6I3 123 aa9.16□□□□□ -0.94
SCN8A-208ENST00000599343 DEFB4AO15263 64 aa9.16□□□□□ -0.94
SCN8A-208ENST00000599343 CTSGP08311 255 aa9.16□□□□□ -0.94
SCN8A-208ENST00000599343 SPART-AS1P0CW21 52 aa9.16□□□□□ -0.94
SCN8A-208ENST00000599343 RNASE8Q8TDE3 154 aaKnown RBP9.15□□□□□ -0.94
SCN8A-208ENST00000599343 PLA2G2EQ9NZK7 142 aa9.15□□□□□ -0.94
SCN8A-208ENST00000599343 IGHV4OR15-8A0A075B7B6 117 aa9.15□□□□□ -0.94
SCN8A-208ENST00000599343 A0A087WW49 117 aa9.15□□□□□ -0.94
SCN8A-208ENST00000599343 CCL18P55774 89 aa9.15□□□□□ -0.94
SCN8A-208ENST00000599343 MED13LQ71F56 2210 aa9.15□□□□□ -0.94
SCN8A-208ENST00000599343 IGHV4-30-2A0A087WSY4 118 aa9.15□□□□□ -0.94
SCN8A-208ENST00000599343 IGKV1-17P01599 117 aa9.15□□□□□ -0.94
SCN8A-208ENST00000599343 ZSWIM8A7E2V4 1837 aa9.15□□□□□ -0.95
SCN8A-208ENST00000599343 SVIPQ8NHG7 77 aa9.15□□□□□ -0.95
SCN8A-208ENST00000599343 WDR81Q562E7 1941 aa9.15□□□□□ -0.95
SCN8A-208ENST00000599343 TOMM6Q96B49 74 aa9.14□□□□□ -0.95
SCN8A-208ENST00000599343 FOXI1Q12951 378 aa9.14□□□□□ -0.95
SCN8A-208ENST00000599343 CRYGBP07316 175 aa9.14□□□□□ -0.95
SCN8A-208ENST00000599343 TAX1BP3O14907 124 aa9.14□□□□□ -0.95
SCN8A-208ENST00000599343 NDUFA1O15239 70 aa9.14□□□□□ -0.95
SCN8A-208ENST00000599343 HHLA3Q9XRX5 114 aa9.14□□□□□ -0.95
SCN8A-208ENST00000599343 FNDC1Q4ZHG4 1894 aaPredicted RBP9.13□□□□□ -0.95
SCN8A-208ENST00000599343 EML6Q6ZMW3 1958 aa9.13□□□□□ -0.95
SCN8A-208ENST00000599343 J3KT08 172 aa9.13□□□□□ -0.95
SCN8A-208ENST00000599343 DYSFO75923 2080 aa9.13□□□□□ -0.95
SCN8A-208ENST00000599343 COA6Q5JTJ3 125 aaKnown RBP9.13□□□□□ -0.95
SCN8A-208ENST00000599343 RNF152Q8N8N0 203 aa9.13□□□□□ -0.95
SCN8A-208ENST00000599343 WFDC11Q8NEX6 87 aa9.13□□□□□ -0.95
SCN8A-208ENST00000599343 TRBV7-3A0A075B6L6 115 aa9.12□□□□□ -0.95
SCN8A-208ENST00000599343 PROP1O75360 226 aa9.12□□□□□ -0.95
SCN8A-208ENST00000599343 PLXNA4Q9HCM2 1894 aa9.12□□□□□ -0.95
SCN8A-208ENST00000599343 C11orf86A6NJI1 115 aa9.12□□□□□ -0.95
SCN8A-208ENST00000599343 FRMD6-AS1P0C7T7 363 aa9.12□□□□□ -0.95
SCN8A-208ENST00000599343 RNF183Q96D59 192 aa9.12□□□□□ -0.95
SCN8A-208ENST00000599343 TRBV10-2A0A0K0K1G8 114 aa9.12□□□□□ -0.95
SCN8A-208ENST00000599343 PTH2Q96A98 100 aa9.12□□□□□ -0.95
SCN8A-208ENST00000599343 MIR7-3HGQ8N6C7 128 aa9.12□□□□□ -0.95
SCN8A-208ENST00000599343 Q8NFD4 153 aa9.12□□□□□ -0.95
SCN8A-208ENST00000599343 PLA2G2CQ5R387 149 aa9.11□□□□□ -0.95
SCN8A-208ENST00000599343 PLXND1Q9Y4D7 1925 aa9.11□□□□□ -0.95
SCN8A-208ENST00000599343 NRGNQ92686 78 aa9.11□□□□□ -0.95
SCN8A-208ENST00000599343 FAM167A-AS1Q96KT0 104 aa9.11□□□□□ -0.95
SCN8A-208ENST00000599343 PKIGQ9Y2B9 76 aa9.11□□□□□ -0.95
SCN8A-208ENST00000599343 THSD7BQ9C0I4 1608 aa9.11□□□□□ -0.95
SCN8A-208ENST00000599343 WI2-2373I1.2A0A1W2PRP0 233 aa9.11□□□□□ -0.95
SCN8A-208ENST00000599343 E9PLD3 99 aa9.11□□□□□ -0.95
SCN8A-208ENST00000599343 HIGD2BQ4VC39 106 aa9.11□□□□□ -0.95
SCN8A-208ENST00000599343 C5orf56Q8N8D9 126 aa9.11□□□□□ -0.95
SCN8A-208ENST00000599343 H0Y9J4 135 aa9.11□□□□□ -0.95
SCN8A-208ENST00000599343 Q8N9W7 124 aa9.11□□□□□ -0.95
SCN8A-208ENST00000599343 DIRC1Q969H9 104 aa9.11□□□□□ -0.95
SCN8A-208ENST00000599343 SPAG11BQ08648 103 aa9.11□□□□□ -0.95
SCN8A-208ENST00000599343 DEFB113Q30KQ7 82 aa9.11□□□□□ -0.95
SCN8A-208ENST00000599343 IGKV2D-26A0A0A0MRZ7 120 aa9.1□□□□□ -0.95
SCN8A-208ENST00000599343 C2orf70A6NJV1 201 aa9.1□□□□□ -0.95
SCN8A-208ENST00000599343 WT1P19544 449 aaPredicted RBP9.1□□□□□ -0.95
SCN8A-208ENST00000599343 HIGD1BQ9P298 99 aa9.1□□□□□ -0.95
SCN8A-208ENST00000599343 DEFB135Q30KP9 77 aa9.1□□□□□ -0.95
SCN8A-208ENST00000599343 KLK12Q9UKR0 248 aa9.1□□□□□ -0.95
SCN8A-208ENST00000599343 NFE4Q86UQ8 179 aa9.09□□□□□ -0.95
SCN8A-208ENST00000599343 BRK1Q8WUW1 75 aa9.09□□□□□ -0.95
SCN8A-208ENST00000599343 JMJD7-PLA2G4BH0Y9G9 81 aa9.09□□□□□ -0.95
SCN8A-208ENST00000599343 CEMP1Q6PRD7 247 aaPredicted RBP9.09□□□□□ -0.95
SCN8A-208ENST00000599343 TM2D2Q9BX73 214 aa9.09□□□□□ -0.95
SCN8A-208ENST00000599343 MALRD1Q5VYJ5 2156 aa9.09□□□□□ -0.95
SCN8A-208ENST00000599343 MDFICQ9P1T7 246 aa9.08□□□□□ -0.96
SCN8A-208ENST00000599343 RLFQ13129 1914 aa9.08□□□□□ -0.96
SCN8A-208ENST00000599343 TEX22C9J3V5 150 aa9.08□□□□□ -0.96
SCN8A-208ENST00000599343 ODF1Q14990 250 aa9.08□□□□□ -0.96
SCN8A-208ENST00000599343 FANCD2OSQ96PS1 177 aa9.08□□□□□ -0.96
SCN8A-208ENST00000599343 TRBV12-3P01733 135 aa9.08□□□□□ -0.96
SCN8A-208ENST00000599343 KIAA1671Q9BY89 1806 aa9.08□□□□□ -0.96
SCN8A-208ENST00000599343 TNRC6BQ9UPQ9 1833 aaKnown RBP9.08□□□□□ -0.96
SCN8A-208ENST00000599343 E7EUB6 86 aa9.08□□□□□ -0.96
SCN8A-208ENST00000599343 H3BQ85 93 aa9.08□□□□□ -0.96
SCN8A-208ENST00000599343 FAM110AQ9BQ89 295 aa9.08□□□□□ -0.96
SCN8A-208ENST00000599343 CHD3Q12873 2000 aaKnown RBP9.07□□□□□ -0.96
SCN8A-208ENST00000599343 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
SCN8A-208ENST00000599343 G3V4G9 280 aa9.07□□□□□ -0.96
SCN8A-208ENST00000599343 SLX1AQ9BQ83 275 aa9.07□□□□□ -0.96
SCN8A-208ENST00000599343 IGHV1-58A0A0C4DH39 117 aa9.07□□□□□ -0.96
SCN8A-208ENST00000599343 TRAV23DV6A0A075B6W5 121 aa9.07□□□□□ -0.96
SCN8A-208ENST00000599343 TRAV26-1A0A087WT03 109 aa9.06□□□□□ -0.96
SCN8A-208ENST00000599343 CTRLP40313 264 aa9.06□□□□□ -0.96
SCN8A-208ENST00000599343 KRTAP27-1Q3LI81 207 aa9.06□□□□□ -0.96
SCN8A-208ENST00000599343 PLXNA2O75051 1894 aa9.06□□□□□ -0.96
SCN8A-208ENST00000599343 TMEM256-PLSCR3K7ERE1 68 aa9.06□□□□□ -0.96
SCN8A-208ENST00000599343 Q6ZUT4 128 aa9.06□□□□□ -0.96
SCN8A-208ENST00000599343 TCL1BO95988 128 aa9.05□□□□□ -0.96
SCN8A-208ENST00000599343 NCKAP5O14513 1909 aa9.05□□□□□ -0.96
SCN8A-208ENST00000599343 TSC2P49815 1807 aa9.05□□□□□ -0.96
SCN8A-208ENST00000599343 IGKV4-1P06312 121 aa9.05□□□□□ -0.96
SCN8A-208ENST00000599343 P0DMU3 169 aa9.05□□□□□ -0.96
SCN8A-208ENST00000599343 FAM231AP0DMU4 169 aa9.05□□□□□ -0.96
SCN8A-208ENST00000599343 FAM231CP0DMU5 169 aa9.05□□□□□ -0.96
SCN8A-208ENST00000599343 ZFP36P26651 326 aaKnown RBP9.05□□□□□ -0.96
SCN8A-208ENST00000599343 H3BT86 120 aa9.05□□□□□ -0.96
SCN8A-208ENST00000599343 CXCL5P42830 114 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms