RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 FER1L6-AS1Q8NA97 138 aa7.65□□□□□ -1.18
LIG1-211ENST00000596457 ZNRF2Q8NHG8 242 aa7.65□□□□□ -1.18
LIG1-211ENST00000596457 Q9H8V8 135 aa7.65□□□□□ -1.18
LIG1-211ENST00000596457 UBR4Q5T4S7 5183 aa7.64□□□□□ -1.19
LIG1-211ENST00000596457 TRBV6-4A0A1B0GX49 114 aa7.64□□□□□ -1.19
LIG1-211ENST00000596457 GAGE12JA6NER3 117 aa7.64□□□□□ -1.19
LIG1-211ENST00000596457 RHODO00212 210 aa7.64□□□□□ -1.19
LIG1-211ENST00000596457 CRYGDP07320 174 aa7.64□□□□□ -1.19
LIG1-211ENST00000596457 OR5AL1P0C617 328 aa7.64□□□□□ -1.19
LIG1-211ENST00000596457 ERVFC1-1P60608 527 aa7.64□□□□□ -1.19
LIG1-211ENST00000596457 GAGE1Q13065 139 aa7.64□□□□□ -1.19
LIG1-211ENST00000596457 GAGE4Q13068 117 aa7.64□□□□□ -1.19
LIG1-211ENST00000596457 GAGE5Q13069 117 aa7.64□□□□□ -1.19
LIG1-211ENST00000596457 ZNF56Q15929 161 aa7.64□□□□□ -1.19
LIG1-211ENST00000596457 GAGE13Q4V321 117 aa7.64□□□□□ -1.19
LIG1-211ENST00000596457 LYZL1Q6UWQ5 148 aa7.64□□□□□ -1.19
LIG1-211ENST00000596457 RPP21Q9H633 154 aaKnown RBP7.64□□□□□ -1.19
LIG1-211ENST00000596457 MRPS16Q9Y3D3 137 aaKnown RBP7.64□□□□□ -1.19
LIG1-211ENST00000596457 ABCA13Q86UQ4 5058 aa7.63□□□□□ -1.19
LIG1-211ENST00000596457 C9JQL5 133 aa7.63□□□□□ -1.19
LIG1-211ENST00000596457 F5H697 171 aa7.63□□□□□ -1.19
LIG1-211ENST00000596457 NXPH4O95158 308 aa7.63□□□□□ -1.19
LIG1-211ENST00000596457 SMIM17P0DL12 118 aa7.63□□□□□ -1.19
LIG1-211ENST00000596457 UFSP1Q6NVU6 142 aa7.63□□□□□ -1.19
LIG1-211ENST00000596457 LINC00336Q6ZUF6 198 aa7.63□□□□□ -1.19
LIG1-211ENST00000596457 SSBP4Q9BWG4 385 aaPredicted RBP7.63□□□□□ -1.19
LIG1-211ENST00000596457 NBDYA0A0U1RRE5 68 aa7.62□□□□□ -1.19
LIG1-211ENST00000596457 NDUFS6O75380 124 aaKnown RBP7.62□□□□□ -1.19
LIG1-211ENST00000596457 MGPP08493 103 aa7.62□□□□□ -1.19
LIG1-211ENST00000596457 IGLC6P0CF74 106 aa7.62□□□□□ -1.19
LIG1-211ENST00000596457 CACNG7P62955 275 aa7.62□□□□□ -1.19
LIG1-211ENST00000596457 TMEM241Q24JQ0 296 aa7.62□□□□□ -1.19
LIG1-211ENST00000596457 ATP6V0E2Q8NHE4 81 aa7.62□□□□□ -1.19
LIG1-211ENST00000596457 MSRB1Q9NZV6 116 aa7.62□□□□□ -1.19
LIG1-211ENST00000596457 Q9UF83 564 aa7.62□□□□□ -1.19
LIG1-211ENST00000596457 LY96Q9Y6Y9 160 aa7.62□□□□□ -1.19
LIG1-211ENST00000596457 VPS13DQ5THJ4 4388 aa7.62□□□□□ -1.19
LIG1-211ENST00000596457 SIVA1O15304 175 aa7.61□□□□□ -1.19
LIG1-211ENST00000596457 ADIRFQ15847 76 aa7.61□□□□□ -1.19
LIG1-211ENST00000596457 Q6ZR54 194 aa7.61□□□□□ -1.19
LIG1-211ENST00000596457 SH2D6Q7Z4S9 175 aa7.61□□□□□ -1.19
LIG1-211ENST00000596457 LINC01551Q86U37 167 aa7.61□□□□□ -1.19
LIG1-211ENST00000596457 UPK3BQ9BT76 320 aa7.61□□□□□ -1.19
LIG1-211ENST00000596457 A0A1W2PPQ1 181 aa7.6□□□□□ -1.19
LIG1-211ENST00000596457 F2Z2F3 143 aa7.6□□□□□ -1.19
LIG1-211ENST00000596457 NTF3P20783 257 aa7.6□□□□□ -1.19
LIG1-211ENST00000596457 RAB4BP61018 213 aa7.6□□□□□ -1.19
LIG1-211ENST00000596457 TWIST1Q15672 202 aa7.6□□□□□ -1.19
LIG1-211ENST00000596457 FAM74A3Q4VXF1 159 aa7.6□□□□□ -1.19
LIG1-211ENST00000596457 OR10J3Q5JRS4 329 aa7.6□□□□□ -1.19
LIG1-211ENST00000596457 SOHLH1Q5JUK2 328 aa7.6□□□□□ -1.19
LIG1-211ENST00000596457 C1orf134Q5TEV5 83 aa7.6□□□□□ -1.19
LIG1-211ENST00000596457 FAM231DQ6ZW35 169 aa7.6□□□□□ -1.19
LIG1-211ENST00000596457 WFDC10BQ8IUB3 73 aa7.6□□□□□ -1.19
LIG1-211ENST00000596457 PGLYRP4Q96LB8 373 aa7.6□□□□□ -1.19
LIG1-211ENST00000596457 AP1S3Q96PC3 154 aa7.6□□□□□ -1.19
LIG1-211ENST00000596457 NAT8Q9UHE5 227 aa7.6□□□□□ -1.19
LIG1-211ENST00000596457 A8MWL6 223 aa7.59□□□□□ -1.19
LIG1-211ENST00000596457 RPL23P62829 140 aaKnown RBP7.59□□□□□ -1.19
LIG1-211ENST00000596457 IFITM2Q01629 132 aa7.59□□□□□ -1.19
LIG1-211ENST00000596457 C15orf54Q8N8G6 183 aa7.59□□□□□ -1.19
LIG1-211ENST00000596457 GTSF1LQ9H1H1 148 aa7.59□□□□□ -1.19
LIG1-211ENST00000596457 SMDT1Q9H4I9 107 aa7.59□□□□□ -1.19
LIG1-211ENST00000596457 KMT2AQ03164 3969 aa7.58□□□□□ -1.2
LIG1-211ENST00000596457 TRAV8-6A0A0B4J262 113 aa7.58□□□□□ -1.2
LIG1-211ENST00000596457 TRGC1P0CF51 173 aa7.58□□□□□ -1.2
LIG1-211ENST00000596457 RPL36AP83881 106 aaKnown RBP7.58□□□□□ -1.2
LIG1-211ENST00000596457 TTC32Q5I0X7 151 aa7.58□□□□□ -1.2
LIG1-211ENST00000596457 GTSF1Q8WW33 167 aa7.58□□□□□ -1.2
LIG1-211ENST00000596457 RPL36ALQ969Q0 106 aaKnown RBP7.58□□□□□ -1.2
LIG1-211ENST00000596457 ISOC2Q96AB3 205 aa7.58□□□□□ -1.2
LIG1-211ENST00000596457 OSTCQ9NRP0 149 aa7.58□□□□□ -1.2
LIG1-211ENST00000596457 KIF25-AS1Q9Y6Z4 181 aa7.58□□□□□ -1.2
LIG1-211ENST00000596457 HECTD4Q9Y4D8 3996 aa7.58□□□□□ -1.2
LIG1-211ENST00000596457 PRSS29PA6NIE9 313 aa7.57□□□□□ -1.2
LIG1-211ENST00000596457 RTL8CO15255 209 aa7.57□□□□□ -1.2
LIG1-211ENST00000596457 EVI2AP22794 236 aa7.57□□□□□ -1.2
LIG1-211ENST00000596457 CTRLP40313 264 aa7.57□□□□□ -1.2
LIG1-211ENST00000596457 CLLU1Q5K131 121 aa7.57□□□□□ -1.2
LIG1-211ENST00000596457 C6orf223Q8N319 242 aa7.57□□□□□ -1.2
LIG1-211ENST00000596457 OR10G8Q8NGN5 311 aa7.57□□□□□ -1.2
LIG1-211ENST00000596457 BORCS7Q96B45 105 aa7.57□□□□□ -1.2
LIG1-211ENST00000596457 KRTAP1-5Q9BYS1 174 aa7.57□□□□□ -1.2
LIG1-211ENST00000596457 DNAH6Q9C0G6 4158 aa7.57□□□□□ -1.2
LIG1-211ENST00000596457 IGHV3-38A0A0C4DH36 116 aa7.56□□□□□ -1.2
LIG1-211ENST00000596457 IGHV3-30P01768 117 aa7.56□□□□□ -1.2
LIG1-211ENST00000596457 IGHV3-33P01772 117 aa7.56□□□□□ -1.2
LIG1-211ENST00000596457 IGHV3-30-3P0DP02 117 aa7.56□□□□□ -1.2
LIG1-211ENST00000596457 IGHV3-30-5P0DP03 117 aa7.56□□□□□ -1.2
LIG1-211ENST00000596457 LELP1Q5T871 98 aa7.56□□□□□ -1.2
LIG1-211ENST00000596457 WDR73Q6P4I2 378 aa7.56□□□□□ -1.2
LIG1-211ENST00000596457 SMIM15Q7Z3B0 74 aa7.56□□□□□ -1.2
LIG1-211ENST00000596457 NEXN-AS1Q8NBZ9 246 aa7.56□□□□□ -1.2
LIG1-211ENST00000596457 TSKUQ8WUA8 353 aa7.56□□□□□ -1.2
LIG1-211ENST00000596457 DPH3P1Q9H4G8 78 aa7.56□□□□□ -1.2
LIG1-211ENST00000596457 V9GYV3 84 aa7.56□□□□□ -1.2
LIG1-211ENST00000596457 TRBV7-3A0A075B6L6 115 aa7.55□□□□□ -1.2
LIG1-211ENST00000596457 TRAV9-2A0A087WT02 112 aa7.55□□□□□ -1.2
LIG1-211ENST00000596457 TRBV10-1A0A0K0K1A3 114 aa7.55□□□□□ -1.2
LIG1-211ENST00000596457 HIGD1CA8MV81 97 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms