RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 MANBALQ9NQG1 85 aa12.04□□□□□ -0.48
SRSF1-209ENST00000585096 DNAH5Q8TE73 4624 aa12.03□□□□□ -0.48
SRSF1-209ENST00000585096 A0A087WWC5 75 aa12.03□□□□□ -0.48
SRSF1-209ENST00000585096 TEX46H3BTG2 121 aa12.03□□□□□ -0.48
SRSF1-209ENST00000585096 IGHV3-30P01768 117 aa12.03□□□□□ -0.48
SRSF1-209ENST00000585096 IGHV3-33P01772 117 aa12.03□□□□□ -0.48
SRSF1-209ENST00000585096 LINC00694P0DN24 101 aa12.03□□□□□ -0.48
SRSF1-209ENST00000585096 IGHV3-30-3P0DP02 117 aa12.03□□□□□ -0.48
SRSF1-209ENST00000585096 IGHV3-30-5P0DP03 117 aa12.03□□□□□ -0.48
SRSF1-209ENST00000585096 C14orf178Q8N769 122 aaPredicted RBP12.03□□□□□ -0.48
SRSF1-209ENST00000585096 MLST8Q9BVC4 326 aa12.03□□□□□ -0.48
SRSF1-209ENST00000585096 A0A087WWL8 130 aa12.02□□□□□ -0.49
SRSF1-209ENST00000585096 TRAV1-1A0A0B4J248 108 aa12.02□□□□□ -0.49
SRSF1-209ENST00000585096 GNG13Q9P2W3 67 aa12.02□□□□□ -0.49
SRSF1-209ENST00000585096 HSPG2P98160 4391 aa12.01□□□□□ -0.49
SRSF1-209ENST00000585096 CXCL1P09341 107 aa12.01□□□□□ -0.49
SRSF1-209ENST00000585096 TCTE3Q8IZS6 198 aa12.01□□□□□ -0.49
SRSF1-209ENST00000585096 RPL35P42766 123 aaKnown RBP12□□□□□ -0.49
SRSF1-209ENST00000585096 CCL20P78556 96 aa12□□□□□ -0.49
SRSF1-209ENST00000585096 LAGE3Q14657 143 aa12□□□□□ -0.49
SRSF1-209ENST00000585096 PRR27Q6MZM9 219 aa12□□□□□ -0.49
SRSF1-209ENST00000585096 Q9HAA7 133 aa12□□□□□ -0.49
SRSF1-209ENST00000585096 Q9UF83 564 aa12□□□□□ -0.49
SRSF1-209ENST00000585096 TRBV10-1A0A0K0K1A3 114 aa11.99□□□□□ -0.49
SRSF1-209ENST00000585096 FUSP35637 526 aaKnown RBP eCLIP11.99□□□□□ -0.492e-8■■□□□ 12.8
SRSF1-209ENST00000585096 RPL19P84098 196 aaKnown RBP11.99□□□□□ -0.49
SRSF1-209ENST00000585096 C11orf52Q96A22 123 aa11.99□□□□□ -0.49
SRSF1-209ENST00000585096 SULT1A2P50226 295 aa11.98□□□□□ -0.49
SRSF1-209ENST00000585096 TOR2AQ5JU69 321 aa11.98□□□□□ -0.49
SRSF1-209ENST00000585096 Q8N1X5 172 aa11.98□□□□□ -0.49
SRSF1-209ENST00000585096 TM2D2Q9BX73 214 aa11.98□□□□□ -0.49
SRSF1-209ENST00000585096 KRTAP4-5Q9BYR2 181 aa11.98□□□□□ -0.49
SRSF1-209ENST00000585096 APOBP04114 4563 aaKnown RBP11.97□□□□□ -0.49
SRSF1-209ENST00000585096 RPL36AP83881 106 aaKnown RBP11.97□□□□□ -0.49
SRSF1-209ENST00000585096 OR10AG1Q8NH19 301 aa11.97□□□□□ -0.49
SRSF1-209ENST00000585096 RPL36ALQ969Q0 106 aaKnown RBP11.97□□□□□ -0.49
SRSF1-209ENST00000585096 SSBP4Q9BWG4 385 aaPredicted RBP11.97□□□□□ -0.49
SRSF1-209ENST00000585096 TRAV8-3A0A0A6YYJ7 113 aa11.96□□□□□ -0.49
SRSF1-209ENST00000585096 SNAI2O43623 268 aa11.96□□□□□ -0.49
SRSF1-209ENST00000585096 IFNA1P01562 189 aa11.96□□□□□ -0.49
SRSF1-209ENST00000585096 C1QBP02746 253 aa11.96□□□□□ -0.49
SRSF1-209ENST00000585096 OR5AL1P0C617 328 aa11.96□□□□□ -0.49
SRSF1-209ENST00000585096 RAB4BP61018 213 aa11.96□□□□□ -0.49
SRSF1-209ENST00000585096 SPANXN1Q5VSR9 72 aa11.96□□□□□ -0.49
SRSF1-209ENST00000585096 SLC51BQ86UW2 128 aa11.96□□□□□ -0.49
SRSF1-209ENST00000585096 URGCP-MRPS24S4R325 110 aa11.96□□□□□ -0.49
SRSF1-209ENST00000585096 ABCA13Q86UQ4 5058 aa11.95□□□□□ -0.5
SRSF1-209ENST00000585096 LRCOL1A6NCL2 159 aa11.95□□□□□ -0.5
SRSF1-209ENST00000585096 PDE6DO43924 150 aa11.95□□□□□ -0.5
SRSF1-209ENST00000585096 CENPWQ5EE01 88 aa11.95□□□□□ -0.5
SRSF1-209ENST00000585096 NTN5Q8WTR8 489 aaPredicted RBP11.95□□□□□ -0.5
SRSF1-209ENST00000585096 DAZAP1Q96EP5 407 aaKnown RBP11.95□□□□□ -0.5
SRSF1-209ENST00000585096 DERL1Q9BUN8 251 aa11.95□□□□□ -0.5
SRSF1-209ENST00000585096 TRBV7-3A0A075B6L6 115 aa11.94□□□□□ -0.5
SRSF1-209ENST00000585096 GCSHP23434 173 aa11.94□□□□□ -0.5
SRSF1-209ENST00000585096 MEF2BQ02080 365 aaPredicted RBP11.94□□□□□ -0.5
SRSF1-209ENST00000585096 ZNF56Q15929 161 aa11.94□□□□□ -0.5
SRSF1-209ENST00000585096 Q6ZNX1 250 aa11.94□□□□□ -0.5
SRSF1-209ENST00000585096 DAZ4Q86SG3 579 aaKnown RBP11.94□□□□□ -0.5
SRSF1-209ENST00000585096 Q8N3U1 123 aa11.94□□□□□ -0.5
SRSF1-209ENST00000585096 SMIM12Q96EX1 92 aa11.94□□□□□ -0.5
SRSF1-209ENST00000585096 DAZ3Q9NR90 486 aaKnown RBP11.94□□□□□ -0.5
SRSF1-209ENST00000585096 IGLV5-52A0A0A0MRZ9 124 aa11.93□□□□□ -0.5
SRSF1-209ENST00000585096 GNG4P50150 75 aa11.93□□□□□ -0.5
SRSF1-209ENST00000585096 UBE2D3P61077 147 aa11.93□□□□□ -0.5
SRSF1-209ENST00000585096 UBE2D2P62837 147 aa11.93□□□□□ -0.5
SRSF1-209ENST00000585096 KCNIP4Q6PIL6 250 aa11.93□□□□□ -0.5
SRSF1-209ENST00000585096 Q8N814 137 aa11.93□□□□□ -0.5
SRSF1-209ENST00000585096 OR10G8Q8NGN5 311 aa11.93□□□□□ -0.5
SRSF1-209ENST00000585096 MUC21A0A0G2JKD1 596 aa11.92□□□□□ -0.5
SRSF1-209ENST00000585096 MUC21A0A140T8X8 626 aa11.92□□□□□ -0.5
SRSF1-209ENST00000585096 SMIM17P0DL12 118 aa11.92□□□□□ -0.5
SRSF1-209ENST00000585096 KRTAP10-1P60331 282 aa11.92□□□□□ -0.5
SRSF1-209ENST00000585096 RPS20P60866 119 aaKnown RBP11.92□□□□□ -0.5
SRSF1-209ENST00000585096 NIT1Q86X76 327 aa11.92□□□□□ -0.5
SRSF1-209ENST00000585096 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.92□□□□□ -0.5
SRSF1-209ENST00000585096 MED9Q9NWA0 146 aa11.92□□□□□ -0.5
SRSF1-209ENST00000585096 COX11Q9Y6N1 276 aa11.92□□□□□ -0.5
SRSF1-209ENST00000585096 A0A087WX48 190 aa11.91□□□□□ -0.5
SRSF1-209ENST00000585096 RAB19A4D1S5 217 aa11.91□□□□□ -0.5
SRSF1-209ENST00000585096 F5H697 171 aa11.91□□□□□ -0.5
SRSF1-209ENST00000585096 BCL2P10415 239 aa11.91□□□□□ -0.5
SRSF1-209ENST00000585096 TAGLN2P37802 199 aaKnown RBP11.91□□□□□ -0.5
SRSF1-209ENST00000585096 SSTP61278 116 aa11.91□□□□□ -0.5
SRSF1-209ENST00000585096 ELOBQ15370 118 aa11.91□□□□□ -0.5
SRSF1-209ENST00000585096 AKAP14Q86UN6 197 aa11.91□□□□□ -0.5
SRSF1-209ENST00000585096 RMI2Q96E14 147 aa11.91□□□□□ -0.5
SRSF1-209ENST00000585096 CHCHD7Q9BUK0 85 aa11.91□□□□□ -0.5
SRSF1-209ENST00000585096 BIN3Q9NQY0 253 aa11.91□□□□□ -0.5
SRSF1-209ENST00000585096 VAX2Q9UIW0 290 aa11.91□□□□□ -0.5
SRSF1-209ENST00000585096 IGLV2-8P01709 118 aa11.9□□□□□ -0.5
SRSF1-209ENST00000585096 OR2D3Q8NGH3 330 aa11.9□□□□□ -0.5
SRSF1-209ENST00000585096 AP1S3Q96PC3 154 aa11.9□□□□□ -0.5
SRSF1-209ENST00000585096 TPPP3Q9BW30 176 aa11.9□□□□□ -0.5
SRSF1-209ENST00000585096 XKRY2A2RUG3 117 aa11.89□□□□□ -0.51
SRSF1-209ENST00000585096 FER1L6-AS1Q8NA97 138 aa11.89□□□□□ -0.51
SRSF1-209ENST00000585096 NEXN-AS1Q8NBZ9 246 aa11.89□□□□□ -0.51
SRSF1-209ENST00000585096 TRBV6-8A0A0A6YYG3 113 aa11.88□□□□□ -0.51
SRSF1-209ENST00000585096 C19orf71A6NCJ1 209 aa11.88□□□□□ -0.51
SRSF1-209ENST00000585096 P01737 135 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms