RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	TRAV21	A0A0B4J279	112 aa		3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158		A8MWV9	139 aa		3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158		H0Y9J4	135 aa		3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158		K7EPK0	472 aa		3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158	SYNGR2	O43760	224 aa		3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158	SRPX	P78539	464 aa		3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158	SLC38A11	Q08AI6	406 aa		3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158	FAM162B	Q5T6X4	162 aa		3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158	KRTAP26-1	Q6PEX3	210 aa		3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158	CLPSL2	Q6UWE3	100 aa		3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158	LYZL2	Q7Z4W2	148 aa		3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158	SNX29P2	Q8IUI4	249 aa		3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158	SAMD12	Q8N8I0	201 aa		3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158	OR10G7	Q8NGN6	311 aa		3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158	ASB13	Q8WXK3	278 aa		3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158	RTBDN	Q9BSG5	229 aa	Predicted RBP	3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158	VCX	Q9H320	206 aa		3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158	LENEP	Q9Y5L5	61 aa		3.56	□□□□□ -1.84
KPNB1-209	ENST00000580158	TRAV8-4	A0A0B4J246	113 aa		3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158		H3BP45	60 aa		3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158		P01737	135 aa		3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158	CD3D	P04234	171 aa		3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158	ANXA3	P12429	323 aa		3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158	CSN1S1	P47710	185 aa		3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158	RRAS2	P62070	204 aa	Predicted RBP	3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158	RPL24	P83731	157 aa	Known RBP	3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158	ZNF506	Q5JVG8	444 aa		3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158	LCE1E	Q5T753	118 aa		3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158	LINC00269	Q8N2A0	174 aa		3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158	OR1L4	Q8NGR5	311 aa		3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158	TMED6	Q8WW62	240 aa		3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158	PFDN5	Q99471	154 aa		3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158	CHCHD5	Q9BSY4	110 aa		3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158	RBM38	Q9H0Z9	239 aa	Known RBP	3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158	MIXL1	Q9H2W2	232 aa		3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158	PRR34	Q9NV39	138 aa		3.55	□□□□□ -1.84
KPNB1-209	ENST00000580158	MUC17	Q685J3	4493 aa		3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	IGLV5-37	A0A075B6J1	123 aa		3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	TRAV6	A0A075B6T7	132 aa		3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	TRBV6-8	A0A0A6YYG3	113 aa		3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	RBAKDN	A6NC62	111 aa		3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	FNDC10	F2Z333	226 aa		3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	RAB3D	O95716	219 aa		3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	APOA1	P02647	267 aa		3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	IGLV7-43	P04211	117 aa		3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	CAV2	P51636	162 aa		3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	AQP4	P55087	323 aa		3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	GABARAPL2	P60520	117 aa		3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	EIF5A	P63241	154 aa	Known RBP	3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	RPL36A	P83881	106 aa	Known RBP	3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	LGALSL	Q3ZCW2	172 aa	Predicted RBP	3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	LRRC37A5P	Q49AS3	106 aa		3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	C14orf178	Q8N769	122 aa	Predicted RBP	3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	PTH2	Q96A98	100 aa		3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	SOST	Q9BQB4	213 aa		3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	PARL	Q9H300	379 aa		3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	CCDC59	Q9P031	241 aa	Known RBP	3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158		Q9UF83	564 aa		3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	CARHSP1	Q9Y2V2	147 aa	Known RBP	3.54	□□□□□ -1.84
KPNB1-209	ENST00000580158	IGLV7-46	A0A075B6I9	117 aa		3.53	□□□□□ -1.84
KPNB1-209	ENST00000580158	DUXB	A0A1W2PPF3	345 aa		3.53	□□□□□ -1.84
KPNB1-209	ENST00000580158		H0Y8G0	127 aa		3.53	□□□□□ -1.84
KPNB1-209	ENST00000580158	SLC25A6	P12236	298 aa		3.53	□□□□□ -1.84
KPNB1-209	ENST00000580158	CYCS	P99999	105 aa	Known RBP	3.53	□□□□□ -1.84
KPNB1-209	ENST00000580158	REG3A	Q06141	175 aa		3.53	□□□□□ -1.84
KPNB1-209	ENST00000580158	TMEM229B	Q8NBD8	167 aa		3.53	□□□□□ -1.84
KPNB1-209	ENST00000580158	DYNC2LI1	Q8TCX1	351 aa		3.53	□□□□□ -1.84
KPNB1-209	ENST00000580158	PSENEN	Q9NZ42	101 aa		3.53	□□□□□ -1.84
KPNB1-209	ENST00000580158	TMEM14C	Q9P0S9	112 aa		3.53	□□□□□ -1.84
KPNB1-209	ENST00000580158	MTFP1	Q9UDX5	166 aa		3.53	□□□□□ -1.84
KPNB1-209	ENST00000580158	TRBV7-3	A0A075B6L6	115 aa		3.52	□□□□□ -1.85
KPNB1-209	ENST00000580158	LOC100506127	A0A0U1RQW1	187 aa		3.52	□□□□□ -1.85
KPNB1-209	ENST00000580158	DISC1	C4P0D8	188 aa		3.52	□□□□□ -1.85
KPNB1-209	ENST00000580158	EIF3G	O75821	320 aa	Known RBP eCLIP	3.52	□□□□□ -1.85
KPNB1-209	ENST00000580158	PTTG1	O95997	202 aa		3.52	□□□□□ -1.85
KPNB1-209	ENST00000580158	RAB5C	P51148	216 aa		3.52	□□□□□ -1.85
KPNB1-209	ENST00000580158	TAS2R19	P59542	299 aa		3.52	□□□□□ -1.85
KPNB1-209	ENST00000580158	S100A10	P60903	97 aa		3.52	□□□□□ -1.85
KPNB1-209	ENST00000580158	RAB2A	P61019	212 aa		3.52	□□□□□ -1.85
KPNB1-209	ENST00000580158	TWIST1	Q15672	202 aa		3.52	□□□□□ -1.85
KPNB1-209	ENST00000580158	IZUMO2	Q6UXV1	221 aa		3.52	□□□□□ -1.85
KPNB1-209	ENST00000580158	SCGB3A2	Q96PL1	93 aa		3.52	□□□□□ -1.85
KPNB1-209	ENST00000580158	GFRA4	Q9GZZ7	299 aa		3.52	□□□□□ -1.85
KPNB1-209	ENST00000580158	IGLV9-49	A0A0B4J1Y8	123 aa		3.51	□□□□□ -1.85
KPNB1-209	ENST00000580158	TRBV10-1	A0A0K0K1A3	114 aa		3.51	□□□□□ -1.85
KPNB1-209	ENST00000580158	FAM24A	A6NFZ4	105 aa		3.51	□□□□□ -1.85
KPNB1-209	ENST00000580158	PRSS2	P07478	247 aa		3.51	□□□□□ -1.85
KPNB1-209	ENST00000580158	KRTAP1-4	P0C5Y4	121 aa		3.51	□□□□□ -1.85
KPNB1-209	ENST00000580158	NBEAP1	P0C6P0	100 aa		3.51	□□□□□ -1.85
KPNB1-209	ENST00000580158	PYY	P10082	97 aa		3.51	□□□□□ -1.85
KPNB1-209	ENST00000580158	UBE2D3	P61077	147 aa		3.51	□□□□□ -1.85
KPNB1-209	ENST00000580158	UBE2D2	P62837	147 aa		3.51	□□□□□ -1.85
KPNB1-209	ENST00000580158	RBX1	P62877	108 aa		3.51	□□□□□ -1.85
KPNB1-209	ENST00000580158	SSBP1	Q04837	148 aa	Known RBP	3.51	□□□□□ -1.85
KPNB1-209	ENST00000580158	ASB16-AS1	Q495Z4	193 aa		3.51	□□□□□ -1.85
KPNB1-209	ENST00000580158	HIGD2B	Q4VC39	106 aa		3.51	□□□□□ -1.85
KPNB1-209	ENST00000580158	TMEM97	Q5BJF2	176 aa		3.51	□□□□□ -1.85
KPNB1-209	ENST00000580158	LINC00337	Q8N6G1	96 aa		3.51	□□□□□ -1.85
KPNB1-209	ENST00000580158	RETNLB	Q9BQ08	111 aa		3.51	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms