RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 GTSF1Q8WW33 167 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 RASL10AQ92737 203 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 C18orf15Q96N68 181 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 IMMP2LQ96T52 175 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 GSN-AS1Q9NRJ2 163 aa5.09□□□□□ -1.59
RNF43-204ENST00000580014 C7orf77A4D0Y5 90 aa5.08□□□□□ -1.6
RNF43-204ENST00000580014 GRIFINA4D1Z8 144 aa5.08□□□□□ -1.6
RNF43-204ENST00000580014 LYRM9A8MSI8 78 aa5.08□□□□□ -1.6
RNF43-204ENST00000580014 F2Z2F3 143 aa5.08□□□□□ -1.6
RNF43-204ENST00000580014 SNAPINO95295 136 aa5.08□□□□□ -1.6
RNF43-204ENST00000580014 APOC3P02656 99 aa5.08□□□□□ -1.6
RNF43-204ENST00000580014 ARMS2P0C7Q2 107 aa5.08□□□□□ -1.6
RNF43-204ENST00000580014 CTRLP40313 264 aa5.08□□□□□ -1.6
RNF43-204ENST00000580014 ZNF415Q09FC8 603 aa5.08□□□□□ -1.6
RNF43-204ENST00000580014 KRTAP17-1Q9BYP8 105 aa5.08□□□□□ -1.6
RNF43-204ENST00000580014 NAGKQ9UJ70 344 aa5.08□□□□□ -1.6
RNF43-204ENST00000580014 TIMM8BQ9Y5J9 83 aaPredicted RBP5.08□□□□□ -1.6
RNF43-204ENST00000580014 TMSB15BA0A087X1C1 80 aa5.07□□□□□ -1.6
RNF43-204ENST00000580014 TEX48A0A1B0GUV7 120 aa5.07□□□□□ -1.6
RNF43-204ENST00000580014 M0R2P5 195 aa5.07□□□□□ -1.6
RNF43-204ENST00000580014 GZMBP10144 247 aa5.07□□□□□ -1.6
RNF43-204ENST00000580014 HTN1P15515 57 aa5.07□□□□□ -1.6
RNF43-204ENST00000580014 FER1L6-AS1Q8NA97 138 aa5.07□□□□□ -1.6
RNF43-204ENST00000580014 EDA2RQ9HAV5 297 aa5.07□□□□□ -1.6
RNF43-204ENST00000580014 NBEAL2Q6ZNJ1 2754 aa5.06□□□□□ -1.6
RNF43-204ENST00000580014 TRAV9-1A0A075B6T8 112 aa5.06□□□□□ -1.6
RNF43-204ENST00000580014 HIGD1CA8MV81 97 aa5.06□□□□□ -1.6
RNF43-204ENST00000580014 SNURFLB1AK76 121 aa5.06□□□□□ -1.6
RNF43-204ENST00000580014 H3BVH4 76 aa5.06□□□□□ -1.6
RNF43-204ENST00000580014 SPART-AS1P0CW21 52 aa5.06□□□□□ -1.6
RNF43-204ENST00000580014 S100A1P23297 94 aa5.06□□□□□ -1.6
RNF43-204ENST00000580014 S100A4P26447 101 aaKnown RBP5.06□□□□□ -1.6
RNF43-204ENST00000580014 CACNG7P62955 275 aa5.06□□□□□ -1.6
RNF43-204ENST00000580014 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
RNF43-204ENST00000580014 UFSP1Q6NVU6 142 aa5.06□□□□□ -1.6
RNF43-204ENST00000580014 ATRAIDQ6UW56 229 aa5.06□□□□□ -1.6
RNF43-204ENST00000580014 LYZL1Q6UWQ5 148 aa5.06□□□□□ -1.6
RNF43-204ENST00000580014 NUP35Q8NFH5 326 aa5.06□□□□□ -1.6
RNF43-204ENST00000580014 NOP10Q9NPE3 64 aaKnown RBP5.06□□□□□ -1.6
RNF43-204ENST00000580014 MSRB1Q9NZV6 116 aa5.06□□□□□ -1.6
RNF43-204ENST00000580014 NAT8BQ9UHF3 227 aa5.06□□□□□ -1.6
RNF43-204ENST00000580014 U3KQK5 164 aa5.06□□□□□ -1.6
RNF43-204ENST00000580014 TENM3Q9P273 2699 aa5.06□□□□□ -1.6
RNF43-204ENST00000580014 A0A0J9YWU9 116 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 A0A1B0GXF2 115 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 GAGE12JA6NER3 117 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 RS1O15537 224 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 CIDEAO60543 219 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 ATP6V1G1O75348 118 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 LINC00315P59091 139 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 ZNF876PQ49A33 203 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 FAM222AQ5U5X8 452 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 Q6ZTI0 123 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 ZFP82Q8N141 532 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 POM121L12Q8N7R1 296 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 GATD1Q8NB37 220 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 OR10AG1Q8NH19 301 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 TMEM18Q96B42 140 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 YPEL4Q96NS1 127 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 RPS10P5Q9NQ39 176 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 CELA1Q9UNI1 258 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 KIF25-AS1Q9Y6Z4 181 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 DNAH9Q9NYC9 4486 aa5.05□□□□□ -1.6
RNF43-204ENST00000580014 PRKDCP78527 4128 aaKnown RBP5.05□□□□□ -1.6
RNF43-204ENST00000580014 A0A1B0GUT8 65 aa5.04□□□□□ -1.6
RNF43-204ENST00000580014 A0A1B0GW15 77 aa5.04□□□□□ -1.6
RNF43-204ENST00000580014 A8MWV9 139 aa5.04□□□□□ -1.6
RNF43-204ENST00000580014 DEFB4AO15263 64 aa5.04□□□□□ -1.6
RNF43-204ENST00000580014 CRYGDP07320 174 aa5.04□□□□□ -1.6
RNF43-204ENST00000580014 NTF3P20783 257 aa5.04□□□□□ -1.6
RNF43-204ENST00000580014 C12orf74Q32Q52 190 aa5.04□□□□□ -1.6
RNF43-204ENST00000580014 CFAP126Q5VTH2 177 aa5.04□□□□□ -1.6
RNF43-204ENST00000580014 ZFP2Q6ZN57 461 aa5.04□□□□□ -1.6
RNF43-204ENST00000580014 ATP5L2Q7Z4Y8 100 aa5.04□□□□□ -1.6
RNF43-204ENST00000580014 PGLYRP4Q96LB8 373 aa5.04□□□□□ -1.6
RNF43-204ENST00000580014 MRPL16Q9NX20 251 aaKnown RBP5.04□□□□□ -1.6
RNF43-204ENST00000580014 PHLDA3Q9Y5J5 127 aa5.04□□□□□ -1.6
RNF43-204ENST00000580014 HUWE1Q7Z6Z7 4374 aaKnown RBP5.04□□□□□ -1.6
RNF43-204ENST00000580014 STAB2Q8WWQ8 2551 aa5.03□□□□□ -1.6
RNF43-204ENST00000580014 TRBV24-1A0A075B6N3 115 aa5.03□□□□□ -1.6
RNF43-204ENST00000580014 TRGV1A0A0A0MS02 117 aa5.03□□□□□ -1.6
RNF43-204ENST00000580014 TRAV4A0A0B4J268 109 aa5.03□□□□□ -1.6
RNF43-204ENST00000580014 EMP1P54849 157 aa5.03□□□□□ -1.6
RNF43-204ENST00000580014 C10orf25Q5T742 122 aa5.03□□□□□ -1.6
RNF43-204ENST00000580014 RASL11AQ6T310 242 aa5.03□□□□□ -1.6
RNF43-204ENST00000580014 BTF3L4Q96K17 158 aa5.03□□□□□ -1.6
RNF43-204ENST00000580014 KRTAP9-3Q9BYQ3 159 aa5.03□□□□□ -1.6
RNF43-204ENST00000580014 M0R381 172 aa5.02□□□□□ -1.61
RNF43-204ENST00000580014 GAGE7O76087 117 aa5.02□□□□□ -1.61
RNF43-204ENST00000580014 GAGE12FP0CL80 117 aa5.02□□□□□ -1.61
RNF43-204ENST00000580014 GAGE12GP0CL81 117 aa5.02□□□□□ -1.61
RNF43-204ENST00000580014 GAGE12IP0CL82 117 aa5.02□□□□□ -1.61
RNF43-204ENST00000580014 DAD1P61803 113 aa5.02□□□□□ -1.61
RNF43-204ENST00000580014 RIGQ13278 110 aa5.02□□□□□ -1.61
RNF43-204ENST00000580014 ELOBQ15370 118 aa5.02□□□□□ -1.61
RNF43-204ENST00000580014 SPANXN1Q5VSR9 72 aa5.02□□□□□ -1.61
RNF43-204ENST00000580014 KCNIP4Q6PIL6 250 aa5.02□□□□□ -1.61
RNF43-204ENST00000580014 PRSS3P2Q8NHM4 247 aa5.02□□□□□ -1.61
RNF43-204ENST00000580014 C11orf45Q8TAV5 145 aa5.02□□□□□ -1.61
RNF43-204ENST00000580014 FRZBQ92765 325 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms