RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 TMEM183AQ8IXX5 376 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 HYLS1Q96M11 299 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 MRPL32Q9BYC8 188 aaKnown RBP4.21□□□□□ -1.74
NUP88-212ENST00000576708 SMIM3Q9BZL3 60 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 SLC25A31Q9H0C2 315 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 HERC1Q15751 4861 aa4.21□□□□□ -1.74
NUP88-212ENST00000576708 A0A087WTM6 91 aa4.2□□□□□ -1.74
NUP88-212ENST00000576708 IGHV3-16A0A0C4DH30 117 aa4.2□□□□□ -1.74
NUP88-212ENST00000576708 K7EQD1 137 aa4.2□□□□□ -1.74
NUP88-212ENST00000576708 M0R036 132 aa4.2□□□□□ -1.74
NUP88-212ENST00000576708 HMGB3O15347 200 aaKnown RBP4.2□□□□□ -1.74
NUP88-212ENST00000576708 PET100P0DJ07 73 aa4.2□□□□□ -1.74
NUP88-212ENST00000576708 VPREB1P12018 145 aa4.2□□□□□ -1.74
NUP88-212ENST00000576708 CSN1S1P47710 185 aa4.2□□□□□ -1.74
NUP88-212ENST00000576708 H2BFSP57053 126 aa4.2□□□□□ -1.74
NUP88-212ENST00000576708 HAMPP81172 84 aa4.2□□□□□ -1.74
NUP88-212ENST00000576708 NEGR1Q7Z3B1 354 aa4.2□□□□□ -1.74
NUP88-212ENST00000576708 TVP23CQ96ET8 276 aa4.2□□□□□ -1.74
NUP88-212ENST00000576708 NMES1Q9C002 83 aa4.2□□□□□ -1.74
NUP88-212ENST00000576708 WFDC1Q9HC57 220 aa4.2□□□□□ -1.74
NUP88-212ENST00000576708 TRAV8-1A0A0A6YYK1 113 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 RBAKDNA6NC62 111 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 PGPA6NDG6 321 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 C17orf112F2Z3M2 114 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 F6UZH7 168 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 INMT-MINDY4F8WBC2 141 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 UPK1BO75841 260 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 TSPAN13O95857 204 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 SCGB1A1P11684 91 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 PMCHP20382 165 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 SRIP30626 198 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 ERVFC1-1P60608 527 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 GNG5P63218 68 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 PRR27Q6MZM9 219 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 GOLT1AQ6ZVE7 132 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 LYPD1Q8N2G4 141 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 OR10G4Q8NGN3 311 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 PPP1R1CQ8WVI7 109 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 TMED6Q8WW62 240 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 RASL10AQ92737 203 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 SGK494Q96LW2 274 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 ATP5SQ99766 215 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 PAM16Q9Y3D7 125 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 HSPB11Q9Y547 144 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 LY96Q9Y6Y9 160 aa4.19□□□□□ -1.74
NUP88-212ENST00000576708 VPS13BQ7Z7G8 4022 aa4.18□□□□□ -1.74
NUP88-212ENST00000576708 DNAH8Q96JB1 4490 aa4.18□□□□□ -1.74
NUP88-212ENST00000576708 hDV102S1A0JD36 115 aa4.18□□□□□ -1.74
NUP88-212ENST00000576708 EPM2AB3EWF7 344 aa4.18□□□□□ -1.74
NUP88-212ENST00000576708 MPC2O95563 127 aa4.18□□□□□ -1.74
NUP88-212ENST00000576708 SMR3BP02814 79 aaPredicted RBP4.18□□□□□ -1.74
NUP88-212ENST00000576708 TYMSP04818 313 aa4.18□□□□□ -1.74
NUP88-212ENST00000576708 PRSS2P07478 247 aa4.18□□□□□ -1.74
NUP88-212ENST00000576708 RPL12P30050 165 aaKnown RBP4.18□□□□□ -1.74
NUP88-212ENST00000576708 RAB2AP61019 212 aa4.18□□□□□ -1.74
NUP88-212ENST00000576708 KHDC3LQ587J8 217 aa4.18□□□□□ -1.74
NUP88-212ENST00000576708 Q6AWC8 147 aa4.18□□□□□ -1.74
NUP88-212ENST00000576708 SCGB1C1Q8TD33 95 aa4.18□□□□□ -1.74
NUP88-212ENST00000576708 PCNPQ8WW12 178 aaKnown RBP4.18□□□□□ -1.74
NUP88-212ENST00000576708 S100ZQ8WXG8 99 aa4.18□□□□□ -1.74
NUP88-212ENST00000576708 OTORQ9NRC9 128 aa4.18□□□□□ -1.74
NUP88-212ENST00000576708 KCNIP2Q9NS61 270 aa4.18□□□□□ -1.74
NUP88-212ENST00000576708 IGKV2D-30A0A075B6S6 120 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 TRAV9-2A0A087WT02 112 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 IGHV3-73A0A0B4J1V6 119 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 TRAV4A0A0B4J268 109 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 C9JCJ5 164 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 M0R2P5 195 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 PPP1R2P9O14990 202 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 DLEU1O43261 78 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 SSNA1O43805 119 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 CRYGDP07320 174 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 INAFM2P0DMQ5 153 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 EVI2AP22794 236 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 ZNF80P51504 273 aaPredicted RBP4.17□□□□□ -1.74
NUP88-212ENST00000576708 TAS2R45P59539 299 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 CYCSP99999 105 aaKnown RBP4.17□□□□□ -1.74
NUP88-212ENST00000576708 DPPA3Q6W0C5 159 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 NFE4Q86UQ8 179 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 TMEM75Q8N9X5 138 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 HSD17B11Q8NBQ5 300 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 INO80EQ8NBZ0 244 aaPredicted RBP4.17□□□□□ -1.74
NUP88-212ENST00000576708 CMTM2Q8TAZ6 248 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 MARVELD1Q9BSK0 173 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 LENEPQ9Y5L5 61 aa4.17□□□□□ -1.74
NUP88-212ENST00000576708 IGLV5-52A0A0A0MRZ9 124 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 TRAV21A0A0B4J279 112 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 LRCOL1A6NCL2 159 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 K7EP13 123 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 IGHV3-30P01768 117 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 IGHV3-33P01772 117 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 ORM1P02763 201 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 IGHV3-30-3P0DP02 117 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 IGHV3-30-5P0DP03 117 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 GATA1P15976 413 aaPredicted RBP4.16□□□□□ -1.74
NUP88-212ENST00000576708 RPL19P84098 196 aaKnown RBP4.16□□□□□ -1.74
NUP88-212ENST00000576708 ACOT6Q3I5F7 207 aaPredicted RBP4.16□□□□□ -1.74
NUP88-212ENST00000576708 TDRG1Q3Y452 100 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 PAPPA-AS1Q5QFB9 102 aa4.16□□□□□ -1.74
NUP88-212ENST00000576708 Q5VSD8 79 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms