RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CLTCQ00610 1675 aaKnown RBP3.05□□□□□ -1.92
TOPBP1-210ENST00000572787 COL16A1Q07092 1604 aaPredicted RBP3.05□□□□□ -1.92
TOPBP1-210ENST00000572787 IQGAP3Q86VI3 1631 aa3.05□□□□□ -1.92
TOPBP1-210ENST00000572787 MYO3AQ8NEV4 1616 aa3.05□□□□□ -1.92
TOPBP1-210ENST00000572787 MUC21A0A140T8X8 626 aa3.05□□□□□ -1.92
TOPBP1-210ENST00000572787 LINC00483Q53H64 154 aa3.05□□□□□ -1.92
TOPBP1-210ENST00000572787 KRTAP26-1Q6PEX3 210 aa3.05□□□□□ -1.92
TOPBP1-210ENST00000572787 FAM167A-AS1Q96KT0 104 aa3.05□□□□□ -1.92
TOPBP1-210ENST00000572787 CCDC88CQ9P219 2028 aa3.05□□□□□ -1.92
TOPBP1-210ENST00000572787 LAMB1P07942 1786 aa3.05□□□□□ -1.92
TOPBP1-210ENST00000572787 LMTK2Q8IWU2 1503 aa3.04□□□□□ -1.92
TOPBP1-210ENST00000572787 AGRNO00468 2067 aa3.04□□□□□ -1.92
TOPBP1-210ENST00000572787 A0A087WWC5 75 aa3.04□□□□□ -1.92
TOPBP1-210ENST00000572787 CXorf51AA0A1B0GTR3 108 aa3.04□□□□□ -1.92
TOPBP1-210ENST00000572787 F2Z2F3 143 aa3.04□□□□□ -1.92
TOPBP1-210ENST00000572787 H7BZZ5 65 aa3.04□□□□□ -1.92
TOPBP1-210ENST00000572787 P0C880 135 aa3.04□□□□□ -1.92
TOPBP1-210ENST00000572787 PRB4P10163 310 aaPredicted RBP3.04□□□□□ -1.92
TOPBP1-210ENST00000572787 Q9BRP9 147 aa3.04□□□□□ -1.92
TOPBP1-210ENST00000572787 GFRA4Q9GZZ7 299 aa3.04□□□□□ -1.92
TOPBP1-210ENST00000572787 MANBALQ9NQG1 85 aa3.04□□□□□ -1.92
TOPBP1-210ENST00000572787 HIGD1BQ9P298 99 aa3.04□□□□□ -1.92
TOPBP1-210ENST00000572787 PRO1854Q9UHT4 67 aa3.04□□□□□ -1.92
TOPBP1-210ENST00000572787 KIF25-AS1Q9Y6Z4 181 aa3.04□□□□□ -1.92
TOPBP1-210ENST00000572787 TET3O43151 1660 aa3.04□□□□□ -1.92
TOPBP1-210ENST00000572787 MYO9BQ13459 2157 aa3.04□□□□□ -1.92
TOPBP1-210ENST00000572787 EFCAB5A4FU69 1503 aa3.03□□□□□ -1.92
TOPBP1-210ENST00000572787 LRRC9Q6ZRR7 1453 aa3.03□□□□□ -1.92
TOPBP1-210ENST00000572787 KIAA1549LQ6ZVL6 1849 aa3.03□□□□□ -1.92
TOPBP1-210ENST00000572787 CABIN1Q9Y6J0 2220 aa3.03□□□□□ -1.92
TOPBP1-210ENST00000572787 MALRD1Q5VYJ5 2156 aa3.03□□□□□ -1.92
TOPBP1-210ENST00000572787 TMEM30CPA0ZSE6 113 aa3.03□□□□□ -1.92
TOPBP1-210ENST00000572787 KLKP1Q107X0 134 aa3.03□□□□□ -1.92
TOPBP1-210ENST00000572787 LYPD5Q6UWN5 251 aa3.03□□□□□ -1.92
TOPBP1-210ENST00000572787 ZNF818PQ6ZRF7 136 aa3.03□□□□□ -1.92
TOPBP1-210ENST00000572787 VMO1Q7Z5L0 202 aa3.03□□□□□ -1.92
TOPBP1-210ENST00000572787 CLECL1Q8IZS7 167 aa3.03□□□□□ -1.92
TOPBP1-210ENST00000572787 CYSTM1Q9H1C7 97 aa3.03□□□□□ -1.92
TOPBP1-210ENST00000572787 RPS10P5Q9NQ39 176 aa3.03□□□□□ -1.92
TOPBP1-210ENST00000572787 R4GN34 69 aa3.03□□□□□ -1.92
TOPBP1-210ENST00000572787 PREX2Q70Z35 1606 aa3.03□□□□□ -1.92
TOPBP1-210ENST00000572787 TCF20Q9UGU0 1960 aaKnown RBP3.03□□□□□ -1.92
TOPBP1-210ENST00000572787 PTPRFP10586 1907 aa3.03□□□□□ -1.92
TOPBP1-210ENST00000572787 IQSEC2Q5JU85 1478 aa3.03□□□□□ -1.93
TOPBP1-210ENST00000572787 SCN4AP35499 1836 aa3.03□□□□□ -1.93
TOPBP1-210ENST00000572787 NUP214P35658 2090 aaPredicted RBP3.02□□□□□ -1.93
TOPBP1-210ENST00000572787 MYO5CQ9NQX4 1742 aa3.02□□□□□ -1.93
TOPBP1-210ENST00000572787 TCHHQ07283 1943 aa3.02□□□□□ -1.93
TOPBP1-210ENST00000572787 IGLV3-16A0A075B6K0 115 aa3.02□□□□□ -1.93
TOPBP1-210ENST00000572787 TRAV23DV6A0A075B6W5 121 aa3.02□□□□□ -1.93
TOPBP1-210ENST00000572787 A0A1W2PNM2 257 aa3.02□□□□□ -1.93
TOPBP1-210ENST00000572787 C2orf70A6NJV1 201 aa3.02□□□□□ -1.93
TOPBP1-210ENST00000572787 IGKV3-20P01619 116 aa3.02□□□□□ -1.93
TOPBP1-210ENST00000572787 IGHV3-33P01772 117 aa3.02□□□□□ -1.93
TOPBP1-210ENST00000572787 UBE2D3P61077 147 aa3.02□□□□□ -1.93
TOPBP1-210ENST00000572787 UBE2D2P62837 147 aa3.02□□□□□ -1.93
TOPBP1-210ENST00000572787 IGFBP7Q16270 282 aa3.02□□□□□ -1.93
TOPBP1-210ENST00000572787 CFAP126Q5VTH2 177 aa3.02□□□□□ -1.93
TOPBP1-210ENST00000572787 LINC00643Q86TS7 51 aa3.02□□□□□ -1.93
TOPBP1-210ENST00000572787 LYPD1Q8N2G4 141 aa3.02□□□□□ -1.93
TOPBP1-210ENST00000572787 ODF3Q96PU9 254 aa3.02□□□□□ -1.93
TOPBP1-210ENST00000572787 CPAMD8Q8IZJ3 1885 aa3.02□□□□□ -1.93
TOPBP1-210ENST00000572787 PLXNA2O75051 1894 aa3.01□□□□□ -1.93
TOPBP1-210ENST00000572787 PCSK5Q92824 1860 aa3.01□□□□□ -1.93
TOPBP1-210ENST00000572787 A0A087WXM4 84 aa3.01□□□□□ -1.93
TOPBP1-210ENST00000572787 TRAV12-3A0A0B4J271 114 aa3.01□□□□□ -1.93
TOPBP1-210ENST00000572787 TRAV40A0A0B4J280 105 aa3.01□□□□□ -1.93
TOPBP1-210ENST00000572787 A0A0G2JND7 137 aa3.01□□□□□ -1.93
TOPBP1-210ENST00000572787 TRBV10-1A0A0K0K1A3 114 aa3.01□□□□□ -1.93
TOPBP1-210ENST00000572787 C7orf77A4D0Y5 90 aa3.01□□□□□ -1.93
TOPBP1-210ENST00000572787 COX6CP09669 75 aa3.01□□□□□ -1.93
TOPBP1-210ENST00000572787 PDE6HQ13956 83 aa3.01□□□□□ -1.93
TOPBP1-210ENST00000572787 TMEM170BQ5T4T1 132 aa3.01□□□□□ -1.93
TOPBP1-210ENST00000572787 C9orf163Q8N9P6 203 aa3.01□□□□□ -1.93
TOPBP1-210ENST00000572787 C4orf3Q8WVX3 66 aa3.01□□□□□ -1.93
TOPBP1-210ENST00000572787 SCN3AQ9NY46 2000 aa3.01□□□□□ -1.93
TOPBP1-210ENST00000572787 ARHGAP21Q5T5U3 1957 aa3.01□□□□□ -1.93
TOPBP1-210ENST00000572787 CDC42BPBQ9Y5S2 1711 aa3□□□□□ -1.93
TOPBP1-210ENST00000572787 TRBV7-3A0A075B6L6 115 aa3□□□□□ -1.93
TOPBP1-210ENST00000572787 MDKP21741 143 aaPredicted RBP3□□□□□ -1.93
TOPBP1-210ENST00000572787 NDPQ00604 133 aa3□□□□□ -1.93
TOPBP1-210ENST00000572787 MOBPQ13875 183 aa3□□□□□ -1.93
TOPBP1-210ENST00000572787 LY6EQ16553 131 aa3□□□□□ -1.93
TOPBP1-210ENST00000572787 Q8N6K4 173 aa3□□□□□ -1.93
TOPBP1-210ENST00000572787 IFI27L1Q96BM0 104 aa3□□□□□ -1.93
TOPBP1-210ENST00000572787 LIMD2Q9BT23 127 aa3□□□□□ -1.93
TOPBP1-210ENST00000572787 PRO2289Q9P1D8 64 aa3□□□□□ -1.93
TOPBP1-210ENST00000572787 MADDQ8WXG6 1647 aa3□□□□□ -1.93
TOPBP1-210ENST00000572787 PTPRDP23468 1912 aa2.99□□□□□ -1.93
TOPBP1-210ENST00000572787 MYH4Q9Y623 1939 aa2.99□□□□□ -1.93
TOPBP1-210ENST00000572787 SMIM13P0DJ93 91 aa2.99□□□□□ -1.93
TOPBP1-210ENST00000572787 C1orf137Q5JT78 98 aa2.99□□□□□ -1.93
TOPBP1-210ENST00000572787 C10orf128Q5T292 105 aa2.99□□□□□ -1.93
TOPBP1-210ENST00000572787 Q6ZTI0 123 aa2.99□□□□□ -1.93
TOPBP1-210ENST00000572787 DMAC1Q96GE9 116 aa2.99□□□□□ -1.93
TOPBP1-210ENST00000572787 LINC00167Q96N53 147 aa2.99□□□□□ -1.93
TOPBP1-210ENST00000572787 TARBP1Q13395 1621 aaKnown RBP2.99□□□□□ -1.93
TOPBP1-210ENST00000572787 MUC22E2RYF6 1773 aaPredicted RBP2.99□□□□□ -1.93
TOPBP1-210ENST00000572787 NWD2Q9ULI1 1742 aa2.99□□□□□ -1.93
TOPBP1-210ENST00000572787 MUC4Q99102 2169 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 199.6 ms