RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 GAGE1Q13065 139 aa8.85□□□□□ -0.99
CDT1-203ENST00000569140 GAGE4Q13068 117 aa8.85□□□□□ -0.99
CDT1-203ENST00000569140 GAGE5Q13069 117 aa8.85□□□□□ -0.99
CDT1-203ENST00000569140 GAGE13Q4V321 117 aa8.85□□□□□ -0.99
CDT1-203ENST00000569140 Q6ZSN1 163 aa8.85□□□□□ -0.99
CDT1-203ENST00000569140 NACAE9PAV3 2078 aa8.85□□□□□ -0.99
CDT1-203ENST00000569140 NDUFS6O75380 124 aaKnown RBP8.84□□□□□ -0.99
CDT1-203ENST00000569140 NXPH4O95158 308 aa8.84□□□□□ -0.99
CDT1-203ENST00000569140 MGPP08493 103 aa8.84□□□□□ -0.99
CDT1-203ENST00000569140 CACNG7P62955 275 aa8.84□□□□□ -0.99
CDT1-203ENST00000569140 LYPD5Q6UWN5 251 aa8.84□□□□□ -0.99
CDT1-203ENST00000569140 LYZL1Q6UWQ5 148 aa8.84□□□□□ -0.99
CDT1-203ENST00000569140 SH2D6Q7Z4S9 175 aa8.84□□□□□ -0.99
CDT1-203ENST00000569140 C14orf178Q8N769 122 aaPredicted RBP8.84□□□□□ -0.99
CDT1-203ENST00000569140 AP1S3Q96PC3 154 aa8.84□□□□□ -0.99
CDT1-203ENST00000569140 Q9H8V8 135 aa8.84□□□□□ -0.99
CDT1-203ENST00000569140 LY96Q9Y6Y9 160 aa8.84□□□□□ -0.99
CDT1-203ENST00000569140 C9JQL5 133 aa8.83□□□□□ -1
CDT1-203ENST00000569140 CRYGDP07320 174 aa8.83□□□□□ -1
CDT1-203ENST00000569140 IGLC6P0CF74 106 aa8.83□□□□□ -1
CDT1-203ENST00000569140 ADIRFQ15847 76 aa8.83□□□□□ -1
CDT1-203ENST00000569140 TMEM241Q24JQ0 296 aa8.83□□□□□ -1
CDT1-203ENST00000569140 FAM74A3Q4VXF1 159 aa8.83□□□□□ -1
CDT1-203ENST00000569140 UFSP1Q6NVU6 142 aa8.83□□□□□ -1
CDT1-203ENST00000569140 LINC01551Q86U37 167 aa8.83□□□□□ -1
CDT1-203ENST00000569140 SSBP4Q9BWG4 385 aaPredicted RBP8.83□□□□□ -1
CDT1-203ENST00000569140 NBDYA0A0U1RRE5 68 aa8.82□□□□□ -1
CDT1-203ENST00000569140 A0A1W2PPQ1 181 aa8.82□□□□□ -1
CDT1-203ENST00000569140 F2Z2F3 143 aa8.82□□□□□ -1
CDT1-203ENST00000569140 C15orf54Q8N8G6 183 aa8.82□□□□□ -1
CDT1-203ENST00000569140 ATP6V0E2Q8NHE4 81 aa8.82□□□□□ -1
CDT1-203ENST00000569140 UPK3BQ9BT76 320 aa8.82□□□□□ -1
CDT1-203ENST00000569140 VPS13DQ5THJ4 4388 aa8.82□□□□□ -1
CDT1-203ENST00000569140 A8MWL6 223 aa8.81□□□□□ -1
CDT1-203ENST00000569140 SIVA1O15304 175 aa8.81□□□□□ -1
CDT1-203ENST00000569140 TWIST1Q15672 202 aa8.81□□□□□ -1
CDT1-203ENST00000569140 TTC32Q5I0X7 151 aa8.81□□□□□ -1
CDT1-203ENST00000569140 SOHLH1Q5JUK2 328 aa8.81□□□□□ -1
CDT1-203ENST00000569140 FAM231DQ6ZW35 169 aa8.81□□□□□ -1
CDT1-203ENST00000569140 BORCS7Q96B45 105 aa8.81□□□□□ -1
CDT1-203ENST00000569140 SMDT1Q9H4I9 107 aa8.81□□□□□ -1
CDT1-203ENST00000569140 MSRB1Q9NZV6 116 aa8.81□□□□□ -1
CDT1-203ENST00000569140 NAT8Q9UHE5 227 aa8.81□□□□□ -1
CDT1-203ENST00000569140 KMT2AQ03164 3969 aa8.8□□□□□ -1
CDT1-203ENST00000569140 TRGC1P0CF51 173 aa8.8□□□□□ -1
CDT1-203ENST00000569140 CTRLP40313 264 aa8.8□□□□□ -1
CDT1-203ENST00000569140 RAB4BP61018 213 aa8.8□□□□□ -1
CDT1-203ENST00000569140 OR10J3Q5JRS4 329 aa8.8□□□□□ -1
CDT1-203ENST00000569140 C1orf134Q5TEV5 83 aa8.8□□□□□ -1
CDT1-203ENST00000569140 WFDC10BQ8IUB3 73 aa8.8□□□□□ -1
CDT1-203ENST00000569140 PGLYRP4Q96LB8 373 aa8.8□□□□□ -1
CDT1-203ENST00000569140 TRAV8-6A0A0B4J262 113 aa8.79□□□□□ -1
CDT1-203ENST00000569140 NTF3P20783 257 aa8.79□□□□□ -1
CDT1-203ENST00000569140 RPL23P62829 140 aaKnown RBP8.79□□□□□ -1
CDT1-203ENST00000569140 RPL36AP83881 106 aaKnown RBP8.79□□□□□ -1
CDT1-203ENST00000569140 CLLU1Q5K131 121 aa8.79□□□□□ -1
CDT1-203ENST00000569140 Q6ZR54 194 aa8.79□□□□□ -1
CDT1-203ENST00000569140 RPL36ALQ969Q0 106 aaKnown RBP8.79□□□□□ -1
CDT1-203ENST00000569140 ISOC2Q96AB3 205 aa8.79□□□□□ -1
CDT1-203ENST00000569140 GTSF1LQ9H1H1 148 aa8.79□□□□□ -1
CDT1-203ENST00000569140 Q9UF83 564 aa8.79□□□□□ -1
CDT1-203ENST00000569140 DNAH6Q9C0G6 4158 aa8.79□□□□□ -1
CDT1-203ENST00000569140 IFITM2Q01629 132 aa8.78□□□□□ -1
CDT1-203ENST00000569140 SMIM15Q7Z3B0 74 aa8.78□□□□□ -1
CDT1-203ENST00000569140 OR10G8Q8NGN5 311 aa8.78□□□□□ -1
CDT1-203ENST00000569140 GTSF1Q8WW33 167 aa8.78□□□□□ -1
CDT1-203ENST00000569140 DPH3P1Q9H4G8 78 aa8.78□□□□□ -1
CDT1-203ENST00000569140 OSTCQ9NRP0 149 aa8.78□□□□□ -1
CDT1-203ENST00000569140 TRBV10-1A0A0K0K1A3 114 aa8.77□□□□□ -1.01
CDT1-203ENST00000569140 EVI2AP22794 236 aa8.77□□□□□ -1.01
CDT1-203ENST00000569140 CT83Q5H943 113 aa8.77□□□□□ -1.01
CDT1-203ENST00000569140 C6orf223Q8N319 242 aa8.77□□□□□ -1.01
CDT1-203ENST00000569140 TSKUQ8WUA8 353 aa8.77□□□□□ -1.01
CDT1-203ENST00000569140 TRBV7-3A0A075B6L6 115 aa8.76□□□□□ -1.01
CDT1-203ENST00000569140 HIGD1CA8MV81 97 aa8.76□□□□□ -1.01
CDT1-203ENST00000569140 LELP1Q5T871 98 aa8.76□□□□□ -1.01
CDT1-203ENST00000569140 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.76□□□□□ -1.01
CDT1-203ENST00000569140 NEXN-AS1Q8NBZ9 246 aa8.76□□□□□ -1.01
CDT1-203ENST00000569140 KRTAP1-5Q9BYS1 174 aa8.76□□□□□ -1.01
CDT1-203ENST00000569140 KIF25-AS1Q9Y6Z4 181 aa8.76□□□□□ -1.01
CDT1-203ENST00000569140 TRAV9-2A0A087WT02 112 aa8.75□□□□□ -1.01
CDT1-203ENST00000569140 IGHV3-38A0A0C4DH36 116 aa8.75□□□□□ -1.01
CDT1-203ENST00000569140 PRSS29PA6NIE9 313 aa8.75□□□□□ -1.01
CDT1-203ENST00000569140 H7C1H1 209 aa8.75□□□□□ -1.01
CDT1-203ENST00000569140 IGHV3-30P01768 117 aa8.75□□□□□ -1.01
CDT1-203ENST00000569140 IGHV3-33P01772 117 aa8.75□□□□□ -1.01
CDT1-203ENST00000569140 LINC00694P0DN24 101 aa8.75□□□□□ -1.01
CDT1-203ENST00000569140 IGHV3-30-3P0DP02 117 aa8.75□□□□□ -1.01
CDT1-203ENST00000569140 IGHV3-30-5P0DP03 117 aa8.75□□□□□ -1.01
CDT1-203ENST00000569140 TIRAPP58753 221 aa8.75□□□□□ -1.01
CDT1-203ENST00000569140 SUMO4Q6EEV6 95 aa8.75□□□□□ -1.01
CDT1-203ENST00000569140 WDR73Q6P4I2 378 aa8.75□□□□□ -1.01
CDT1-203ENST00000569140 LINC00336Q6ZUF6 198 aa8.75□□□□□ -1.01
CDT1-203ENST00000569140 TNFRSF18Q9Y5U5 241 aa8.75□□□□□ -1.01
CDT1-203ENST00000569140 V9GYV3 84 aa8.75□□□□□ -1.01
CDT1-203ENST00000569140 RTL8CO15255 209 aa8.74□□□□□ -1.01
CDT1-203ENST00000569140 UBE2D3P61077 147 aa8.74□□□□□ -1.01
CDT1-203ENST00000569140 UBE2D2P62837 147 aa8.74□□□□□ -1.01
CDT1-203ENST00000569140 GFRA4Q9GZZ7 299 aa8.74□□□□□ -1.01
CDT1-203ENST00000569140 A0A087WWC5 75 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms