RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 CCDC179H3BU77 68 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 TGFAP01135 160 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 APELAP0DMC3 54 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 SCGB1D4Q6XE38 83 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 C10orf126Q8N4M7 172 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 SMIM20Q8N5G0 67 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 KIR2DL4Q99706 377 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 SMIM2Q9BVW6 85 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 LINC01548A6NM66 108 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 SLC25A20O43772 301 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 IGHV4-31P0DP07 118 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 HLA-DMBP28068 263 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 UBE2E1P51965 193 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 ERCC8Q13216 396 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 MRPL23Q16540 153 aaKnown RBP8.44□□□□□ -1.06
TCF4-222ENST00000564228 Q8TAT8 98 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 SCGB3A1Q96QR1 104 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 RNF5Q99942 180 aa8.44□□□□□ -1.06
TCF4-222ENST00000564228 RBAKDNA6NC62 111 aa8.43□□□□□ -1.06
TCF4-222ENST00000564228 LY6LH3BQJ8 138 aa8.43□□□□□ -1.06
TCF4-222ENST00000564228 CNTFRP26992 372 aa8.43□□□□□ -1.06
TCF4-222ENST00000564228 LINC00528Q8N1L1 170 aa8.43□□□□□ -1.06
TCF4-222ENST00000564228 H3BVH4 76 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 NPFFO15130 113 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 SAA4P35542 130 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 PAPPA-AS1Q5QFB9 102 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 BRD3OSQ6XYD6 125 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 OR10J6PQ8NGY7 276 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 PLEKHB2Q96CS7 222 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 SLC50A1Q9BRV3 221 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 ZNF469Q96JG9 3925 aaPredicted RBP8.42□□□□□ -1.06
TCF4-222ENST00000564228 ACANP16112 2415 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 TRAV8-2A0A0B4J237 113 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 TRAV4A0A0B4J268 109 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 A0A0J9YY99 117 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 TIMM23O14925 209 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 CNIH1O95406 144 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 TRGV3P03979 118 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 P0DMU3 169 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 FAM231AP0DMU4 169 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 FAM231CP0DMU5 169 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 ARL3P36405 182 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 RPL13AP40429 203 aaKnown RBP8.42□□□□□ -1.06
TCF4-222ENST00000564228 MINOS1Q5TGZ0 78 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 DYNAPQ8N1N2 210 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 TMEM126AQ9H061 195 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 MDFICQ9P1T7 246 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 PRO1854Q9UHT4 67 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 MINOS1-NBL1R4GNA1 71 aa8.42□□□□□ -1.06
TCF4-222ENST00000564228 IGHV1-69DA0A0B4J2H0 117 aa8.41□□□□□ -1.06
TCF4-222ENST00000564228 J3QL48 77 aa8.41□□□□□ -1.06
TCF4-222ENST00000564228 AVPP01185 164 aa8.41□□□□□ -1.06
TCF4-222ENST00000564228 IGHV1-69P01742 117 aa8.41□□□□□ -1.06
TCF4-222ENST00000564228 CFC1BP0CG36 223 aa8.41□□□□□ -1.06
TCF4-222ENST00000564228 CFC1P0CG37 223 aa8.41□□□□□ -1.06
TCF4-222ENST00000564228 IGHV4-38-2P0DP08 117 aa8.41□□□□□ -1.06
TCF4-222ENST00000564228 PRB4P10163 310 aaPredicted RBP8.41□□□□□ -1.06
TCF4-222ENST00000564228 HERVK_113P61574 105 aa8.41□□□□□ -1.06
TCF4-222ENST00000564228 BAALCQ8WXS3 180 aa8.41□□□□□ -1.06
TCF4-222ENST00000564228 FLNBO75369 2602 aaKnown RBP8.41□□□□□ -1.06
TCF4-222ENST00000564228 IGHV3-30P01768 117 aa8.41□□□□□ -1.06
TCF4-222ENST00000564228 IGHV3-30-5P0DP03 117 aa8.41□□□□□ -1.06
TCF4-222ENST00000564228 RASL10AQ92737 203 aa8.41□□□□□ -1.06
TCF4-222ENST00000564228 CLEC3BP05452 202 aa8.4□□□□□ -1.06
TCF4-222ENST00000564228 MFAP4P55083 255 aa8.4□□□□□ -1.06
TCF4-222ENST00000564228 HES1Q14469 280 aa8.4□□□□□ -1.06
TCF4-222ENST00000564228 SFTA2Q6UW10 78 aa8.4□□□□□ -1.06
TCF4-222ENST00000564228 SLC25A29Q8N8R3 303 aa8.4□□□□□ -1.06
TCF4-222ENST00000564228 CFHR4Q92496 578 aa8.4□□□□□ -1.06
TCF4-222ENST00000564228 BAHCC1Q9P281 2608 aa8.39□□□□□ -1.07
TCF4-222ENST00000564228 IGKV3D-20A0A0C4DH25 116 aa8.39□□□□□ -1.07
TCF4-222ENST00000564228 IGHV7-4-1A0A0J9YVY3 117 aa8.39□□□□□ -1.07
TCF4-222ENST00000564228 C9JAW5 83 aa8.39□□□□□ -1.07
TCF4-222ENST00000564228 BRI3O95415 125 aa8.39□□□□□ -1.07
TCF4-222ENST00000564228 GHRHP01286 108 aa8.39□□□□□ -1.07
TCF4-222ENST00000564228 SONP18583 2426 aaKnown RBP8.39□□□□□ -1.07
TCF4-222ENST00000564228 TRAV8-4A0A0B4J246 113 aa8.39□□□□□ -1.07
TCF4-222ENST00000564228 OOSP1A8MZH6 123 aa8.39□□□□□ -1.07
TCF4-222ENST00000564228 J3QLI3 93 aa8.39□□□□□ -1.07
TCF4-222ENST00000564228 CRLF1O75462 422 aa8.39□□□□□ -1.07
TCF4-222ENST00000564228 FAM159AQ6UWV7 190 aa8.39□□□□□ -1.07
TCF4-222ENST00000564228 Q8N1Y9 231 aa8.39□□□□□ -1.07
TCF4-222ENST00000564228 ODF3Q96PU9 254 aa8.39□□□□□ -1.07
TCF4-222ENST00000564228 AKAP9Q99996 3911 aa8.38□□□□□ -1.07
TCF4-222ENST00000564228 ZFHX3Q15911 3703 aa8.38□□□□□ -1.07
TCF4-222ENST00000564228 SCGB2A1O75556 95 aa8.38□□□□□ -1.07
TCF4-222ENST00000564228 SUMO2P61956 95 aaKnown RBP8.38□□□□□ -1.07
TCF4-222ENST00000564228 SMAD5-AS1Q9Y6J3 95 aa8.38□□□□□ -1.07
TCF4-222ENST00000564228 TRAV26-2A0A0B4J265 109 aa8.37□□□□□ -1.07
TCF4-222ENST00000564228 A0A0B4J2C4 111 aa8.37□□□□□ -1.07
TCF4-222ENST00000564228 M0R381 172 aa8.37□□□□□ -1.07
TCF4-222ENST00000564228 ATXN8Q156A1 80 aa8.37□□□□□ -1.07
TCF4-222ENST00000564228 C15orf53Q8NAA6 179 aa8.37□□□□□ -1.07
TCF4-222ENST00000564228 IGLV11-55A0A075B6I3 123 aa8.37□□□□□ -1.07
TCF4-222ENST00000564228 FAM240AA0A1B0GVK7 77 aa8.37□□□□□ -1.07
TCF4-222ENST00000564228 IGHV3-33P01772 117 aa8.37□□□□□ -1.07
TCF4-222ENST00000564228 MEIG1Q5JSS6 88 aa8.37□□□□□ -1.07
TCF4-222ENST00000564228 C2orf66Q6UXQ4 117 aa8.37□□□□□ -1.07
TCF4-222ENST00000564228 NTN5Q8WTR8 489 aaPredicted RBP8.37□□□□□ -1.07
TCF4-222ENST00000564228 SPANXDQ9BXN6 97 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms