RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 ATP6V0E2Q8NHE4 81 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 DDA1Q9BW61 102 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 BANF2Q9H503 90 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 CALML5Q9NZT1 146 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 SYNJ1O43426 1573 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 KIF13AQ9H1H9 1805 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 LRP1BQ9NZR2 4599 aa-0.2□□□□□ -2.44
CHD9-207ENST00000562806 KMT2AQ03164 3969 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 SPAG17Q6Q759 2223 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 UHRF1BP1LA0JNW5 1464 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 LAMA5O15230 3695 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 MUC22E2RYF6 1773 aaPredicted RBP-0.21□□□□□ -2.44
CHD9-207ENST00000562806 CHD9Q3L8U1 2897 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 DCHS2Q6V1P9 2916 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 MYCBP2O75592 4640 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 TRAV36DV7A0A075B6V5 113 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 YPEL1O60688 119 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 SMIM24O75264 130 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 RBP4P02753 201 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 APODP05090 189 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 PAEPP09466 180 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 COX4I1P13073 169 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 IFITM1P13164 125 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 HLA-DRB4P13762 266 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 TMEM244Q5VVB8 128 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 SNX29P2Q8IUI4 249 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 DYNLRB2Q8TF09 96 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 MAGOHBQ96A72 148 aaKnown RBP-0.21□□□□□ -2.44
CHD9-207ENST00000562806 IFI27L1Q96BM0 104 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 Q96NJ1 140 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 TMEM242Q9NWH2 141 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 ERG28Q9UKR5 140 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 NOP16Q9Y3C1 178 aaKnown RBP-0.21□□□□□ -2.44
CHD9-207ENST00000562806 HLA-DRB4X5D2U9 266 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 MAP1AP78559 2803 aaPredicted RBP-0.21□□□□□ -2.44
CHD9-207ENST00000562806 LPAP08519 4548 aa-0.21□□□□□ -2.44
CHD9-207ENST00000562806 PHIPQ8WWQ0 1821 aa-0.22□□□□□ -2.44
CHD9-207ENST00000562806 HSPG2P98160 4391 aa-0.22□□□□□ -2.44
CHD9-207ENST00000562806 BORCS7-ASMTA0A0B4J1R7 106 aa-0.22□□□□□ -2.44
CHD9-207ENST00000562806 A0A1B0GX51 115 aa-0.22□□□□□ -2.44
CHD9-207ENST00000562806 TSTD3H0UI37 97 aa-0.22□□□□□ -2.44
CHD9-207ENST00000562806 CCDC179H3BU77 68 aa-0.22□□□□□ -2.44
CHD9-207ENST00000562806 TNFSF15O95150 251 aa-0.22□□□□□ -2.44
CHD9-207ENST00000562806 NBEAP1P0C6P0 100 aa-0.22□□□□□ -2.44
CHD9-207ENST00000562806 CCL3L1P16619 93 aa-0.22□□□□□ -2.44
CHD9-207ENST00000562806 SSBP1Q04837 148 aaKnown RBP-0.22□□□□□ -2.44
CHD9-207ENST00000562806 FAM74A4Q5TZK3 123 aa-0.22□□□□□ -2.44
CHD9-207ENST00000562806 SMIM15Q7Z3B0 74 aa-0.22□□□□□ -2.44
CHD9-207ENST00000562806 SPANXCQ9NY87 97 aa-0.22□□□□□ -2.44
CHD9-207ENST00000562806 LSM2Q9Y333 95 aaKnown RBP-0.22□□□□□ -2.44
CHD9-207ENST00000562806 HSPB11Q9Y547 144 aa-0.22□□□□□ -2.44
CHD9-207ENST00000562806 ABCA2Q9BZC7 2435 aa-0.22□□□□□ -2.44
CHD9-207ENST00000562806 BSNQ9UPA5 3926 aa-0.22□□□□□ -2.44
CHD9-207ENST00000562806 NRXN2Q9P2S2 1712 aa-0.22□□□□□ -2.44
CHD9-207ENST00000562806 STAB2Q8WWQ8 2551 aa-0.22□□□□□ -2.45
CHD9-207ENST00000562806 NBPF19A0A087WUL8 3843 aa-0.22□□□□□ -2.45
CHD9-207ENST00000562806 ERCC6Q03468 1493 aa-0.22□□□□□ -2.45
CHD9-207ENST00000562806 APC2O95996 2303 aa-0.22□□□□□ -2.45
CHD9-207ENST00000562806 TGP01266 2768 aa-0.23□□□□□ -2.45
CHD9-207ENST00000562806 DNHD1Q96M86 4753 aa-0.23□□□□□ -2.45
CHD9-207ENST00000562806 F5P12259 2224 aa-0.23□□□□□ -2.45
CHD9-207ENST00000562806 SIPA1L3O60292 1781 aaPredicted RBP-0.23□□□□□ -2.45
CHD9-207ENST00000562806 SCTP09683 121 aa-0.23□□□□□ -2.45
CHD9-207ENST00000562806 KRTAP20-2Q3LI61 65 aa-0.23□□□□□ -2.45
CHD9-207ENST00000562806 KRTAP19-7Q3SYF9 63 aa-0.23□□□□□ -2.45
CHD9-207ENST00000562806 CLLU1Q5K131 121 aa-0.23□□□□□ -2.45
CHD9-207ENST00000562806 SLC48A1Q6P1K1 146 aa-0.23□□□□□ -2.45
CHD9-207ENST00000562806 ATP11AUNQ6ZP68 121 aa-0.23□□□□□ -2.45
CHD9-207ENST00000562806 TCTE3Q8IZS6 198 aa-0.23□□□□□ -2.45
CHD9-207ENST00000562806 C4orf33Q8N1A6 199 aa-0.23□□□□□ -2.45
CHD9-207ENST00000562806 HIGD1AQ9Y241 93 aa-0.23□□□□□ -2.45
CHD9-207ENST00000562806 GINS2Q9Y248 185 aa-0.23□□□□□ -2.45
CHD9-207ENST00000562806 EP300Q09472 2414 aaPredicted RBP-0.23□□□□□ -2.45
CHD9-207ENST00000562806 GOLGA3Q08378 1498 aa-0.23□□□□□ -2.45
CHD9-207ENST00000562806 NINQ8N4C6 2090 aa-0.23□□□□□ -2.45
CHD9-207ENST00000562806 NBEAL1Q6ZS30 2694 aa-0.23□□□□□ -2.45
CHD9-207ENST00000562806 HIVEP1P15822 2718 aa-0.23□□□□□ -2.45
CHD9-207ENST00000562806 TEP1Q99973 2627 aaKnown RBP-0.24□□□□□ -2.45
CHD9-207ENST00000562806 AKAP11Q9UKA4 1901 aa-0.24□□□□□ -2.45
CHD9-207ENST00000562806 PIEZO2Q9H5I5 2752 aa-0.24□□□□□ -2.45
CHD9-207ENST00000562806 TRBV7-1A0A0A6YYK4 115 aa-0.24□□□□□ -2.45
CHD9-207ENST00000562806 H0YJX3 145 aa-0.24□□□□□ -2.45
CHD9-207ENST00000562806 DEGS1O15121 323 aa-0.24□□□□□ -2.45
CHD9-207ENST00000562806 MT4P47944 62 aa-0.24□□□□□ -2.45
CHD9-207ENST00000562806 COX7B2Q8TF08 81 aa-0.24□□□□□ -2.45
CHD9-207ENST00000562806 SPANXA1Q9NS26 97 aa-0.24□□□□□ -2.45
CHD9-207ENST00000562806 EPG5Q9HCE0 2579 aa-0.24□□□□□ -2.45
CHD9-207ENST00000562806 ITPR3Q14573 2671 aa-0.24□□□□□ -2.45
CHD9-207ENST00000562806 ARFGEF1Q9Y6D6 1849 aa-0.24□□□□□ -2.45
CHD9-207ENST00000562806 COL12A1Q99715 3063 aa-0.24□□□□□ -2.45
CHD9-207ENST00000562806 MED13LQ71F56 2210 aa-0.25□□□□□ -2.45
CHD9-207ENST00000562806 ASXL3Q9C0F0 2248 aa-0.25□□□□□ -2.45
CHD9-207ENST00000562806 SONP18583 2426 aaKnown RBP-0.25□□□□□ -2.45
CHD9-207ENST00000562806 CREBBPQ92793 2442 aa-0.25□□□□□ -2.45
CHD9-207ENST00000562806 GNG14A0A1W2PPG7 69 aa-0.25□□□□□ -2.45
CHD9-207ENST00000562806 J3QLW9 94 aa-0.25□□□□□ -2.45
CHD9-207ENST00000562806 ACYP2P14621 99 aa-0.25□□□□□ -2.45
CHD9-207ENST00000562806 CMPK1P30085 196 aa-0.25□□□□□ -2.45
CHD9-207ENST00000562806 Q6ZRX8 168 aa-0.25□□□□□ -2.45
CHD9-207ENST00000562806 C20orf197Q8N268 126 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms