RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 J3QLW9 94 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 NCR2O95944 276 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 TFF1P04155 84 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 IGLC6P0CF74 106 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 DR1Q01658 176 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 SSBP1Q04837 148 aaKnown RBP-0.05□□□□□ -2.42
SPG11-222ENST00000560435 CLLU1Q5K131 121 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 LINC01545Q5VT33 79 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 AKAP14Q86UN6 197 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 SNX29P2Q8IUI4 249 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 MMGT1Q8N4V1 131 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 AIF1LQ9BQI0 150 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 PRR15LQ9BU68 103 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 BPESC1Q9GZL8 116 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 SAR1AQ9NR31 198 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 NDUFA12Q9UI09 145 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 ZNF142P52746 1687 aaPredicted RBP-0.05□□□□□ -2.42
SPG11-222ENST00000560435 OVOS2A0A0J9YW53 1432 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 OVOS2Q6IE36 1432 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 PKD1L1Q8TDX9 2849 aa-0.05□□□□□ -2.42
SPG11-222ENST00000560435 ANKRD30AQ9BXX3 1397 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 VIRMAQ69YN4 1812 aaKnown RBP-0.06□□□□□ -2.42
SPG11-222ENST00000560435 ADGRB1O14514 1584 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 SYNJ1O43426 1573 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 KDM5CP41229 1560 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 LAMC3Q9Y6N6 1575 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 MYO7AQ13402 2215 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 CACNA1CQ13936 2221 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 KIAA0100Q14667 2235 aaKnown RBP-0.06□□□□□ -2.42
SPG11-222ENST00000560435 LAMB1P07942 1786 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 TRAV12-3A0A0B4J271 114 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 FAM236AA0A1B0GUQ0 79 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 FAM236BA0A1B0GV22 79 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 LOC105371267A0A1B0GV96 52 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 TCRBV3S1A0A5B6 114 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 CLPSL1A2RUU4 121 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 F2Z2F3 143 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 ARPC5O15511 151 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 SPINK1P00995 79 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 LINC00694P0DN24 101 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 UBE2D1P51668 147 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 CKS1BP61024 79 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 NCS1P62166 190 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 HIST1H1AQ02539 215 aaPredicted RBP-0.06□□□□□ -2.42
SPG11-222ENST00000560435 INSL4Q14641 139 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 SPCS2Q15005 226 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 C9orf116Q5BN46 136 aaPredicted RBP-0.06□□□□□ -2.42
SPG11-222ENST00000560435 Q5VV11 94 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 CYP2G1PQ6ZSU1 146 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 C20orf197Q8N268 126 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 VSTM2AQ8TAG5 236 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 SMIM11BQ8TCY0 68 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 COX7B2Q8TF08 81 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 WFDC6Q9BQY6 131 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 SPRR2GQ9BYE4 73 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 TMEM242Q9NWH2 141 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 U3KQA8 63 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 ERCC6Q03468 1493 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 DISP2A7MBM2 1401 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 F5P12259 2224 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 ASXL3Q9C0F0 2248 aa-0.06□□□□□ -2.42
SPG11-222ENST00000560435 AKAP11Q9UKA4 1901 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 TNS1Q9HBL0 1735 aaKnown RBP-0.07□□□□□ -2.42
SPG11-222ENST00000560435 PLXNA1Q9UIW2 1896 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 ABCA2Q9BZC7 2435 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 CADP27708 2225 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 KIF13AQ9H1H9 1805 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 TRGV1A0A0A0MS02 117 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 TRBV7-1A0A0A6YYK4 115 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 G3V318 75 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 APODP05090 189 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 NMBP08949 121 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 PIRTP0C851 137 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 COX4I1P13073 169 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 COX6A2Q02221 97 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 ALX1Q15699 326 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 FAM74A4Q5TZK3 123 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 MIC13Q5XKP0 118 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 SLC48A1Q6P1K1 146 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 SCIMPQ6UWF3 145 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 Q6ZRX8 168 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 CTAGE3PQ8IX95 158 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 C4orf33Q8N1A6 199 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 SDF2Q99470 211 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 BATF3Q9NR55 127 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 GSKIPQ9P0R6 139 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 V9GYV3 84 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 PRG4Q92954 1404 aaPredicted RBP-0.07□□□□□ -2.42
SPG11-222ENST00000560435 UNC13BO14795 1591 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 ARHGEF10O15013 1369 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 IBTKQ9P2D0 1353 aaPredicted RBP-0.07□□□□□ -2.42
SPG11-222ENST00000560435 TMEM2Q9UHN6 1383 aa-0.07□□□□□ -2.42
SPG11-222ENST00000560435 ZMYM4Q5VZL5 1548 aa-0.08□□□□□ -2.42
SPG11-222ENST00000560435 PHIPQ8WWQ0 1821 aa-0.08□□□□□ -2.42
SPG11-222ENST00000560435 FLNAP21333 2647 aaKnown RBP-0.08□□□□□ -2.42
SPG11-222ENST00000560435 CHD6Q8TD26 2715 aa-0.08□□□□□ -2.42
SPG11-222ENST00000560435 TRBV10-3A0A0K0K1G6 114 aa-0.08□□□□□ -2.42
SPG11-222ENST00000560435 TMEM14DPA8MWL7 114 aa-0.08□□□□□ -2.42
SPG11-222ENST00000560435 J3QR89 54 aa-0.08□□□□□ -2.42
SPG11-222ENST00000560435 NPFFO15130 113 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms