RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 CMTM2Q8TAZ6 248 aa12.73□□□□□ -0.37
RABGGTA-214ENST00000560163 SAMD10Q9BYL1 202 aa12.73□□□□□ -0.37
RABGGTA-214ENST00000560163 PARLQ9H300 379 aa12.73□□□□□ -0.37
RABGGTA-214ENST00000560163 RPH3ALQ9UNE2 315 aa12.73□□□□□ -0.37
RABGGTA-214ENST00000560163 KHDC3LQ587J8 217 aa12.72□□□□□ -0.37
RABGGTA-214ENST00000560163 UFSP1Q6NVU6 142 aa12.72□□□□□ -0.37
RABGGTA-214ENST00000560163 OR10G9Q8NGN4 311 aa12.72□□□□□ -0.37
RABGGTA-214ENST00000560163 OR10G7Q8NGN6 311 aa12.72□□□□□ -0.37
RABGGTA-214ENST00000560163 TMEM75Q8N9X5 138 aa12.71□□□□□ -0.37
RABGGTA-214ENST00000560163 UBE2WQ96B02 151 aa12.71□□□□□ -0.37
RABGGTA-214ENST00000560163 URGCP-MRPS24S4R325 110 aa12.71□□□□□ -0.37
RABGGTA-214ENST00000560163 CTXND1A0A1B0GTU2 59 aa12.7□□□□□ -0.38
RABGGTA-214ENST00000560163 EIF3GO75821 320 aaKnown RBP eCLIP12.7□□□□□ -0.38
RABGGTA-214ENST00000560163 CDC34P49427 236 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-214ENST00000560163 BLOC1S1P78537 153 aa12.7□□□□□ -0.38
RABGGTA-214ENST00000560163 C14orf177Q52M58 125 aa12.7□□□□□ -0.38
RABGGTA-214ENST00000560163 CLLU1Q5K131 121 aa12.7□□□□□ -0.38
RABGGTA-214ENST00000560163 C14orf178Q8N769 122 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-214ENST00000560163 FAM213BQ8TBF2 198 aa12.7□□□□□ -0.38
RABGGTA-214ENST00000560163 ACTR3CQ9C0K3 210 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-214ENST00000560163 TRAV1-1A0A0B4J248 108 aa12.69□□□□□ -0.38
RABGGTA-214ENST00000560163 FHITP49789 147 aa12.69□□□□□ -0.38
RABGGTA-214ENST00000560163 FGF8P55075 233 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-214ENST00000560163 TAS2R45P59539 299 aa12.69□□□□□ -0.38
RABGGTA-214ENST00000560163 GNG5P63218 68 aa12.69□□□□□ -0.38
RABGGTA-214ENST00000560163 ZNF726P1Q15940 193 aa12.69□□□□□ -0.38
RABGGTA-214ENST00000560163 PIK3CD-AS1Q5SR53 167 aa12.69□□□□□ -0.38
RABGGTA-214ENST00000560163 MBD3L1Q8WWY6 194 aa12.69□□□□□ -0.38
RABGGTA-214ENST00000560163 SGK494Q96LW2 274 aa12.69□□□□□ -0.38
RABGGTA-214ENST00000560163 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-214ENST00000560163 A8MWV9 139 aa12.68□□□□□ -0.38
RABGGTA-214ENST00000560163 PANO1I0J062 215 aa12.68□□□□□ -0.38
RABGGTA-214ENST00000560163 RAB14P61106 215 aa12.68□□□□□ -0.38
RABGGTA-214ENST00000560163 LYPD6BQ8NI32 183 aa12.68□□□□□ -0.38
RABGGTA-214ENST00000560163 RAB24Q969Q5 203 aa12.68□□□□□ -0.38
RABGGTA-214ENST00000560163 CHCHD7Q9BUK0 85 aa12.68□□□□□ -0.38
RABGGTA-214ENST00000560163 A0A1W2PPV4 95 aa12.67□□□□□ -0.38
RABGGTA-214ENST00000560163 GCGP01275 180 aa12.67□□□□□ -0.38
RABGGTA-214ENST00000560163 STAG3L2P0CL84 134 aa12.67□□□□□ -0.38
RABGGTA-214ENST00000560163 STAG3L3P0CL85 134 aa12.67□□□□□ -0.38
RABGGTA-214ENST00000560163 JPT2Q9H910 190 aa12.67□□□□□ -0.38
RABGGTA-214ENST00000560163 MAP1LC3B2A6NCE7 125 aa12.66□□□□□ -0.38
RABGGTA-214ENST00000560163 H2AFB1P0C5Y9 115 aa12.66□□□□□ -0.38
RABGGTA-214ENST00000560163 Q0VG73 95 aa12.66□□□□□ -0.38
RABGGTA-214ENST00000560163 ELOBQ15370 118 aa12.66□□□□□ -0.38
RABGGTA-214ENST00000560163 ENHOQ6UWT2 76 aa12.66□□□□□ -0.38
RABGGTA-214ENST00000560163 C9orf163Q8N9P6 203 aa12.66□□□□□ -0.38
RABGGTA-214ENST00000560163 MAP1LC3BQ9GZQ8 125 aa12.66□□□□□ -0.38
RABGGTA-214ENST00000560163 TEX46H3BTG2 121 aa12.65□□□□□ -0.38
RABGGTA-214ENST00000560163 DGAT2L7PQ6IED9 249 aa12.65□□□□□ -0.38
RABGGTA-214ENST00000560163 PQLC2Q6ZP29 291 aa12.65□□□□□ -0.38
RABGGTA-214ENST00000560163 NDFIP1Q9BT67 221 aa12.65□□□□□ -0.38
RABGGTA-214ENST00000560163 A0A087WX48 190 aa12.64□□□□□ -0.39
RABGGTA-214ENST00000560163 PRSS1P07477 247 aa12.64□□□□□ -0.39
RABGGTA-214ENST00000560163 ASIPP42127 132 aa12.64□□□□□ -0.39
RABGGTA-214ENST00000560163 SDIM1Q6ZPB5 146 aa12.64□□□□□ -0.39
RABGGTA-214ENST00000560163 SFT2D1Q8WV19 159 aa12.64□□□□□ -0.39
RABGGTA-214ENST00000560163 SERTM2A0A1B0GWG4 89 aa12.63□□□□□ -0.39
RABGGTA-214ENST00000560163 USP17L23D6RBM5 183 aa12.63□□□□□ -0.39
RABGGTA-214ENST00000560163 CXorf1O96002 111 aa12.63□□□□□ -0.39
RABGGTA-214ENST00000560163 C1orf43Q9BWL3 253 aa12.63□□□□□ -0.39
RABGGTA-214ENST00000560163 IGKV3D-20A0A0C4DH25 116 aa12.62□□□□□ -0.39
RABGGTA-214ENST00000560163 DMRTA1Q5VZB9 504 aa12.62□□□□□ -0.39
RABGGTA-214ENST00000560163 SUN5Q8TC36 379 aa12.62□□□□□ -0.39
RABGGTA-214ENST00000560163 MED9Q9NWA0 146 aa12.62□□□□□ -0.39
RABGGTA-214ENST00000560163 PSG8Q9UQ74 426 aa12.62□□□□□ -0.39
RABGGTA-214ENST00000560163 TCRAP04437 139 aa12.61□□□□□ -0.39
RABGGTA-214ENST00000560163 ARL14EPLP0DKL9 152 aa12.61□□□□□ -0.39
RABGGTA-214ENST00000560163 SMUG1Q53HV7 270 aa12.61□□□□□ -0.39
RABGGTA-214ENST00000560163 GCHFRP30047 84 aa12.6□□□□□ -0.39
RABGGTA-214ENST00000560163 CIRBPQ14011 172 aaKnown RBP12.6□□□□□ -0.39
RABGGTA-214ENST00000560163 TMEM167BQ9NRX6 74 aa12.6□□□□□ -0.39
RABGGTA-214ENST00000560163 ARL2-SNX15V9GYD0 113 aa12.6□□□□□ -0.39
RABGGTA-214ENST00000560163 LINC00862A6NCI5 91 aa12.59□□□□□ -0.39
RABGGTA-214ENST00000560163 HMGB3O15347 200 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-214ENST00000560163 IL36BQ9NZH7 164 aa12.59□□□□□ -0.39
RABGGTA-214ENST00000560163 RHODO00212 210 aa12.58□□□□□ -0.4
RABGGTA-214ENST00000560163 TAGLN2P37802 199 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-214ENST00000560163 FLI1Q01543 452 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-214ENST00000560163 KCNIP4Q6PIL6 250 aa12.58□□□□□ -0.4
RABGGTA-214ENST00000560163 C5orf17Q8NAS9 161 aa12.58□□□□□ -0.4
RABGGTA-214ENST00000560163 ZC2HC1AQ96GY0 325 aa12.58□□□□□ -0.4
RABGGTA-214ENST00000560163 S100A4P26447 101 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-214ENST00000560163 UBE2D3P61077 147 aa12.57□□□□□ -0.4
RABGGTA-214ENST00000560163 UBE2D2P62837 147 aa12.57□□□□□ -0.4
RABGGTA-214ENST00000560163 CCL20P78556 96 aa12.57□□□□□ -0.4
RABGGTA-214ENST00000560163 RPL19P84098 196 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-214ENST00000560163 MANBALQ9NQG1 85 aa12.57□□□□□ -0.4
RABGGTA-214ENST00000560163 ODF1Q14990 250 aa12.56□□□□□ -0.4
RABGGTA-214ENST00000560163 KRTAP26-1Q6PEX3 210 aa12.56□□□□□ -0.4
RABGGTA-214ENST00000560163 PRNTQ86SH4 94 aa12.56□□□□□ -0.4
RABGGTA-214ENST00000560163 C15orf54Q8N8G6 183 aa12.56□□□□□ -0.4
RABGGTA-214ENST00000560163 RAB19A4D1S5 217 aa12.55□□□□□ -0.4
RABGGTA-214ENST00000560163 TMEM262E9PQX1 116 aa12.55□□□□□ -0.4
RABGGTA-214ENST00000560163 K7EQM0 130 aa12.55□□□□□ -0.4
RABGGTA-214ENST00000560163 NDUFS6O75380 124 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-214ENST00000560163 IFNA1P01562 189 aa12.55□□□□□ -0.4
RABGGTA-214ENST00000560163 HLA-DQA1P01909 254 aa12.55□□□□□ -0.4
RABGGTA-214ENST00000560163 NDUFA5Q16718 116 aa12.55□□□□□ -0.4
RABGGTA-214ENST00000560163 MPV17L2Q567V2 206 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms