RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 TMEM210A6NLX4 147 aa-2.36□□□□□ -2.79
LINC00648-203ENST00000556923 IFNA1P01562 189 aa-2.36□□□□□ -2.79
LINC00648-203ENST00000556923 LINC00305Q7Z4B0 112 aa-2.36□□□□□ -2.79
LINC00648-203ENST00000556923 WDR97A6NE52 1622 aa-2.36□□□□□ -2.79
LINC00648-203ENST00000556923 CMYA5Q8N3K9 4069 aa-2.37□□□□□ -2.79
LINC00648-203ENST00000556923 IGHV1-24A0A0C4DH33 117 aa-2.37□□□□□ -2.79
LINC00648-203ENST00000556923 CXorf51AA0A1B0GTR3 108 aa-2.37□□□□□ -2.79
LINC00648-203ENST00000556923 TNFP01375 233 aa-2.37□□□□□ -2.79
LINC00648-203ENST00000556923 REEP5Q00765 189 aa-2.37□□□□□ -2.79
LINC00648-203ENST00000556923 DEFA5Q01523 94 aa-2.37□□□□□ -2.79
LINC00648-203ENST00000556923 FADDQ13158 208 aa-2.37□□□□□ -2.79
LINC00648-203ENST00000556923 KRTAP20-1Q3LI63 56 aa-2.37□□□□□ -2.79
LINC00648-203ENST00000556923 OR4S1Q8NGB4 309 aa-2.37□□□□□ -2.79
LINC00648-203ENST00000556923 AKAP9Q99996 3911 aa-2.37□□□□□ -2.79
LINC00648-203ENST00000556923 VPS13BQ7Z7G8 4022 aa-2.37□□□□□ -2.79
LINC00648-203ENST00000556923 IFNA21P01568 189 aa-2.38□□□□□ -2.79
LINC00648-203ENST00000556923 UBE2DNLQ8IWF7 75 aa-2.38□□□□□ -2.79
LINC00648-203ENST00000556923 CNFNQ9BYD5 112 aa-2.38□□□□□ -2.79
LINC00648-203ENST00000556923 GVINP1Q7Z2Y8 2422 aa-2.39□□□□□ -2.79
LINC00648-203ENST00000556923 TRAV13-1A0A0B4J241 112 aa-2.39□□□□□ -2.79
LINC00648-203ENST00000556923 CKS2P33552 79 aa-2.39□□□□□ -2.79
LINC00648-203ENST00000556923 SPRR1AP35321 89 aa-2.39□□□□□ -2.79
LINC00648-203ENST00000556923 OTOSQ8NHW6 89 aa-2.39□□□□□ -2.79
LINC00648-203ENST00000556923 CEP19Q96LK0 163 aa-2.39□□□□□ -2.79
LINC00648-203ENST00000556923 RIF1Q5UIP0 2472 aaKnown RBP-2.39□□□□□ -2.79
LINC00648-203ENST00000556923 S100A6P06703 90 aa-2.4□□□□□ -2.79
LINC00648-203ENST00000556923 GCHFRP30047 84 aa-2.4□□□□□ -2.79
LINC00648-203ENST00000556923 ZNF142P52746 1687 aaPredicted RBP-2.41□□□□□ -2.79
LINC00648-203ENST00000556923 A0A0D9SFI3 127 aa-2.41□□□□□ -2.8
LINC00648-203ENST00000556923 H3BMG7 143 aa-2.41□□□□□ -2.8
LINC00648-203ENST00000556923 CRYGSP22914 178 aa-2.41□□□□□ -2.8
LINC00648-203ENST00000556923 HSD11B1P28845 292 aa-2.41□□□□□ -2.8
LINC00648-203ENST00000556923 S100A11P31949 105 aa-2.41□□□□□ -2.8
LINC00648-203ENST00000556923 BASP1P80723 227 aaKnown RBP-2.41□□□□□ -2.8
LINC00648-203ENST00000556923 DNAH1Q9P2D7 4330 aa-2.41□□□□□ -2.8
LINC00648-203ENST00000556923 FER1L6Q2WGJ9 1857 aa-2.41□□□□□ -2.8
LINC00648-203ENST00000556923 GNG3P63215 75 aa-2.42□□□□□ -2.8
LINC00648-203ENST00000556923 URB1O60287 2271 aaKnown RBP-2.42□□□□□ -2.8
LINC00648-203ENST00000556923 LRRK2Q5S007 2527 aa-2.43□□□□□ -2.8
LINC00648-203ENST00000556923 TRBV7-1A0A0A6YYK4 115 aa-2.43□□□□□ -2.8
LINC00648-203ENST00000556923 TCRBV3S1A0A5B6 114 aa-2.43□□□□□ -2.8
LINC00648-203ENST00000556923 ACYP2P14621 99 aa-2.43□□□□□ -2.8
LINC00648-203ENST00000556923 SRP9P49458 86 aaKnown RBP-2.43□□□□□ -2.8
LINC00648-203ENST00000556923 INSL4Q14641 139 aa-2.43□□□□□ -2.8
LINC00648-203ENST00000556923 Q8IZM0 81 aa-2.43□□□□□ -2.8
LINC00648-203ENST00000556923 SMIM20Q8N5G0 67 aa-2.43□□□□□ -2.8
LINC00648-203ENST00000556923 PPDPFLQ8WWR9 84 aa-2.43□□□□□ -2.8
LINC00648-203ENST00000556923 GCN1Q92616 2671 aaKnown RBP-2.44□□□□□ -2.8
LINC00648-203ENST00000556923 APOBP04114 4563 aaKnown RBP-2.44□□□□□ -2.8
LINC00648-203ENST00000556923 CCDC168Q8NDH2 2452 aa-2.44□□□□□ -2.8
LINC00648-203ENST00000556923 TMEM14DPA8MWL7 114 aa-2.44□□□□□ -2.8
LINC00648-203ENST00000556923 OR2T2Q6IF00 324 aa-2.44□□□□□ -2.8
LINC00648-203ENST00000556923 FAM24BQ8N5W8 94 aa-2.44□□□□□ -2.8
LINC00648-203ENST00000556923 DYDC1Q8WWB3 177 aa-2.44□□□□□ -2.8
LINC00648-203ENST00000556923 VPS25Q9BRG1 176 aa-2.44□□□□□ -2.8
LINC00648-203ENST00000556923 SRCAPQ6ZRS2 3230 aa-2.44□□□□□ -2.8
LINC00648-203ENST00000556923 HBDP02042 147 aa-2.45□□□□□ -2.8
LINC00648-203ENST00000556923 LSM3P62310 102 aaKnown RBP-2.45□□□□□ -2.8
LINC00648-203ENST00000556923 TMED2Q15363 201 aa-2.45□□□□□ -2.8
LINC00648-203ENST00000556923 LXNQ9BS40 222 aa-2.45□□□□□ -2.8
LINC00648-203ENST00000556923 SPG11Q96JI7 2443 aa-2.45□□□□□ -2.8
LINC00648-203ENST00000556923 DNAH7Q8WXX0 4024 aa-2.45□□□□□ -2.8
LINC00648-203ENST00000556923 KIF13AQ9H1H9 1805 aa-2.45□□□□□ -2.8
LINC00648-203ENST00000556923 PLCE1Q9P212 2302 aa-2.46□□□□□ -2.8
LINC00648-203ENST00000556923 NBEAQ8NFP9 2946 aa-2.46□□□□□ -2.8
LINC00648-203ENST00000556923 SPINK8P0C7L1 97 aa-2.46□□□□□ -2.8
LINC00648-203ENST00000556923 CCL3L1P16619 93 aa-2.46□□□□□ -2.8
LINC00648-203ENST00000556923 CRYBA4P53673 196 aa-2.46□□□□□ -2.8
LINC00648-203ENST00000556923 FAM74A4Q5TZK3 123 aa-2.46□□□□□ -2.8
LINC00648-203ENST00000556923 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.46□□□□□ -2.8
LINC00648-203ENST00000556923 A0A0C4DFX4 3053 aa-2.46□□□□□ -2.8
LINC00648-203ENST00000556923 TRBV7-6A0A0J9YX20 115 aa-2.47□□□□□ -2.8
LINC00648-203ENST00000556923 LOC730098B7Z3J9 87 aa-2.47□□□□□ -2.8
LINC00648-203ENST00000556923 C4orf33Q8N1A6 199 aa-2.47□□□□□ -2.8
LINC00648-203ENST00000556923 LAMTOR2Q9Y2Q5 125 aa-2.47□□□□□ -2.8
LINC00648-203ENST00000556923 NBASA2RRP1 2371 aa-2.47□□□□□ -2.81
LINC00648-203ENST00000556923 MAP1LC3B2A6NCE7 125 aa-2.48□□□□□ -2.81
LINC00648-203ENST00000556923 PPP5D1E7EU14 171 aa-2.48□□□□□ -2.81
LINC00648-203ENST00000556923 SSBP1Q04837 148 aaKnown RBP-2.48□□□□□ -2.81
LINC00648-203ENST00000556923 SLC48A1Q6P1K1 146 aa-2.48□□□□□ -2.81
LINC00648-203ENST00000556923 CYP2G1PQ6ZSU1 146 aa-2.48□□□□□ -2.81
LINC00648-203ENST00000556923 EYSQ5T1H1 3165 aa-2.48□□□□□ -2.81
LINC00648-203ENST00000556923 ITPR2Q14571 2701 aa-2.48□□□□□ -2.81
LINC00648-203ENST00000556923 PHIPQ8WWQ0 1821 aa-2.49□□□□□ -2.81
LINC00648-203ENST00000556923 GOLGA3Q08378 1498 aa-2.49□□□□□ -2.81
LINC00648-203ENST00000556923 PGRMC1O00264 195 aaKnown RBP-2.49□□□□□ -2.81
LINC00648-203ENST00000556923 MRPS25P82663 173 aaKnown RBP-2.49□□□□□ -2.81
LINC00648-203ENST00000556923 BATF3Q9NR55 127 aa-2.49□□□□□ -2.81
LINC00648-203ENST00000556923 UFC1Q9Y3C8 167 aa-2.49□□□□□ -2.81
LINC00648-203ENST00000556923 CASZ1Q86V15 1759 aa-2.49□□□□□ -2.81
LINC00648-203ENST00000556923 CHD7Q9P2D1 2997 aa-2.5□□□□□ -2.81
LINC00648-203ENST00000556923 K7EQZ3 153 aa-2.5□□□□□ -2.81
LINC00648-203ENST00000556923 AKR1D1P51857 326 aa-2.5□□□□□ -2.81
LINC00648-203ENST00000556923 MT1HP80294 61 aa-2.5□□□□□ -2.81
LINC00648-203ENST00000556923 OR8B8Q15620 311 aa-2.5□□□□□ -2.81
LINC00648-203ENST00000556923 CBLN4Q9NTU7 201 aa-2.5□□□□□ -2.81
LINC00648-203ENST00000556923 TRGV1A0A0A0MS02 117 aa-2.51□□□□□ -2.81
LINC00648-203ENST00000556923 M0QZK8 103 aa-2.51□□□□□ -2.81
LINC00648-203ENST00000556923 MT1AP04731 61 aa-2.51□□□□□ -2.81
LINC00648-203ENST00000556923 PCBD1P61457 104 aa-2.51□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms