RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 SLC48A1Q6P1K1 146 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 Q6ZRX8 168 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 TMEM35BQ8NCS4 154 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 PPDPFLQ8WWR9 84 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 VPS25Q9BRG1 176 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 TAS2R8Q9NYW2 309 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 METTL1Q9UBP6 276 aaKnown RBP-0.32□□□□□ -2.46
SRP54-207ENST00000555535 KMT2AQ03164 3969 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 STAB1Q9NY15 2570 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 SPTBN1Q01082 2364 aaKnown RBP-0.32□□□□□ -2.46
SRP54-207ENST00000555535 ARHGAP31Q2M1Z3 1444 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 CACNA1AO00555 2505 aa-0.32□□□□□ -2.46
SRP54-207ENST00000555535 NSD1Q96L73 2696 aaPredicted RBP-0.32□□□□□ -2.46
SRP54-207ENST00000555535 GOLGA3Q08378 1498 aa-0.33□□□□□ -2.46
SRP54-207ENST00000555535 A0A087WTM6 91 aa-0.33□□□□□ -2.46
SRP54-207ENST00000555535 TRGV1A0A0A0MS02 117 aa-0.33□□□□□ -2.46
SRP54-207ENST00000555535 BORCS7-ASMTA0A0B4J1R7 106 aa-0.33□□□□□ -2.46
SRP54-207ENST00000555535 E5RI56 91 aa-0.33□□□□□ -2.46
SRP54-207ENST00000555535 CCL3L1P16619 93 aa-0.33□□□□□ -2.46
SRP54-207ENST00000555535 COX7B2Q8TF08 81 aa-0.33□□□□□ -2.46
SRP54-207ENST00000555535 DYNLRB2Q8TF09 96 aa-0.33□□□□□ -2.46
SRP54-207ENST00000555535 Q96NJ1 140 aa-0.33□□□□□ -2.46
SRP54-207ENST00000555535 BOLA2Q9H3K6 86 aa-0.33□□□□□ -2.46
SRP54-207ENST00000555535 ATPIF1Q9UII2 106 aa-0.33□□□□□ -2.46
SRP54-207ENST00000555535 V9GYV3 84 aa-0.33□□□□□ -2.46
SRP54-207ENST00000555535 MED23Q9ULK4 1368 aa-0.33□□□□□ -2.46
SRP54-207ENST00000555535 PTPN13Q12923 2485 aa-0.33□□□□□ -2.46
SRP54-207ENST00000555535 CSMD3Q7Z407 3707 aa-0.34□□□□□ -2.46
SRP54-207ENST00000555535 PTPRMP28827 1452 aa-0.34□□□□□ -2.46
SRP54-207ENST00000555535 TRAV12-3A0A0B4J271 114 aa-0.34□□□□□ -2.46
SRP54-207ENST00000555535 OVOS2A0A0G2JMS6 1433 aa-0.34□□□□□ -2.46
SRP54-207ENST00000555535 TMEM14DPA8MWL7 114 aa-0.34□□□□□ -2.46
SRP54-207ENST00000555535 DEGS1O15121 323 aa-0.34□□□□□ -2.46
SRP54-207ENST00000555535 DPM2O94777 84 aa-0.34□□□□□ -2.46
SRP54-207ENST00000555535 S100GP29377 79 aa-0.34□□□□□ -2.46
SRP54-207ENST00000555535 OR8B8Q15620 311 aa-0.34□□□□□ -2.46
SRP54-207ENST00000555535 OR8I2Q8N0Y5 310 aa-0.34□□□□□ -2.46
SRP54-207ENST00000555535 ROCK1Q13464 1354 aa-0.34□□□□□ -2.46
SRP54-207ENST00000555535 TENM4Q6N022 2769 aa-0.34□□□□□ -2.46
SRP54-207ENST00000555535 MAP1BP46821 2468 aaKnown RBP-0.35□□□□□ -2.46
SRP54-207ENST00000555535 SYNJ1O43426 1573 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 WNK1Q9H4A3 2382 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 DOCK2Q92608 1830 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 TRAV1-2A0A0B4J238 106 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 TRAV22A0A0B4J277 110 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 A0A1B0GV72 72 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 J3QLW9 94 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 M0R129 80 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 SMIM24O75264 130 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 RBP4P02753 201 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 SSBP1Q04837 148 aaKnown RBP-0.35□□□□□ -2.47
SRP54-207ENST00000555535 WFDC2Q14508 124 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 SPCS2Q15005 226 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 TMEM128Q5BJH2 165 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 TMEM244Q5VVB8 128 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 OR9Q1Q8NGQ5 310 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 NPVFQ9HCQ7 196 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 DNAJC15Q9Y5T4 150 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 ZNF292O60281 2723 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 KDM3BQ7LBC6 1761 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 MYCBP2O75592 4640 aa-0.35□□□□□ -2.47
SRP54-207ENST00000555535 ZANQ9Y493 2812 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 LRP2P98164 4655 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 FAT2Q9NYQ8 4349 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 FXYD6-FXYD2A0A087WZ82 144 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 FAM92AA1XBS5 289 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 J3KT08 172 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 PGRMC1O00264 195 aaKnown RBP-0.36□□□□□ -2.47
SRP54-207ENST00000555535 FABP1P07148 127 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 CMPK1P30085 196 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 HAMPP81172 84 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 TMEM91Q6ZNR0 172 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 CYP4F30PQ9H0H9 118 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 BATF3Q9NR55 127 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 ERG28Q9UKR5 140 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 LPAP08519 4548 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 PRDM2Q13029 1718 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 NWD2Q9ULI1 1742 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 ERCC6Q03468 1493 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 ZNF236Q9UL36 1845 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 CHD9Q3L8U1 2897 aa-0.36□□□□□ -2.47
SRP54-207ENST00000555535 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.36□□□□□ -2.47
SRP54-207ENST00000555535 A0A0D9SFI3 127 aa-0.37□□□□□ -2.47
SRP54-207ENST00000555535 G3V318 75 aa-0.37□□□□□ -2.47
SRP54-207ENST00000555535 PRM1P04553 51 aa-0.37□□□□□ -2.47
SRP54-207ENST00000555535 HLA-DRB4P13762 266 aa-0.37□□□□□ -2.47
SRP54-207ENST00000555535 SPRR2DP22532 72 aa-0.37□□□□□ -2.47
SRP54-207ENST00000555535 EDDM3BP56851 147 aa-0.37□□□□□ -2.47
SRP54-207ENST00000555535 INSL4Q14641 139 aa-0.37□□□□□ -2.47
SRP54-207ENST00000555535 RPL7L1Q6DKI1 246 aaKnown RBP-0.37□□□□□ -2.47
SRP54-207ENST00000555535 ATP6V0E2Q8NHE4 81 aa-0.37□□□□□ -2.47
SRP54-207ENST00000555535 C10orf82Q8WW14 230 aa-0.37□□□□□ -2.47
SRP54-207ENST00000555535 LSM2Q9Y333 95 aaKnown RBP-0.37□□□□□ -2.47
SRP54-207ENST00000555535 HLA-DRB4X5D2U9 266 aa-0.37□□□□□ -2.47
SRP54-207ENST00000555535 HECTD4Q9Y4D8 3996 aa-0.37□□□□□ -2.47
SRP54-207ENST00000555535 NPFFO15130 113 aa-0.38□□□□□ -2.47
SRP54-207ENST00000555535 KRTAP19-7Q3SYF9 63 aa-0.38□□□□□ -2.47
SRP54-207ENST00000555535 Q8IZM0 81 aa-0.38□□□□□ -2.47
SRP54-207ENST00000555535 NDUFA12Q9UI09 145 aa-0.38□□□□□ -2.47
SRP54-207ENST00000555535 SCP2D1Q9UJQ7 156 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms