RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 ZNF609O15014 1411 aa2.67□□□□□ -1.98
FCF1-207ENST00000554973 MUC22E2RYF6 1773 aaPredicted RBP2.66□□□□□ -1.98
FCF1-207ENST00000554973 ZGRF1Q86YA3 2104 aa2.66□□□□□ -1.98
FCF1-207ENST00000554973 CDK12Q9NYV4 1490 aaPredicted RBP2.66□□□□□ -1.98
FCF1-207ENST00000554973 PKIAP61925 76 aa2.66□□□□□ -1.98
FCF1-207ENST00000554973 UBE2G1P62253 170 aa2.66□□□□□ -1.98
FCF1-207ENST00000554973 S100A7L2Q5SY68 101 aa2.66□□□□□ -1.98
FCF1-207ENST00000554973 UNQ6190/PRO20217Q6UXQ8 127 aa2.66□□□□□ -1.98
FCF1-207ENST00000554973 AQP10Q96PS8 301 aa2.66□□□□□ -1.98
FCF1-207ENST00000554973 DSCR8Q96T75 97 aa2.66□□□□□ -1.98
FCF1-207ENST00000554973 ZNF142P52746 1687 aaPredicted RBP2.66□□□□□ -1.98
FCF1-207ENST00000554973 IFT140Q96RY7 1462 aa2.65□□□□□ -1.98
FCF1-207ENST00000554973 RBBP6Q7Z6E9 1792 aaKnown RBP2.65□□□□□ -1.99
FCF1-207ENST00000554973 TCRBV3S1A0A5B6 114 aa2.65□□□□□ -1.99
FCF1-207ENST00000554973 INSL4Q14641 139 aa2.65□□□□□ -1.99
FCF1-207ENST00000554973 TTC9CQ8N5M4 171 aa2.65□□□□□ -1.99
FCF1-207ENST00000554973 ABCC10Q5T3U5 1492 aa2.65□□□□□ -1.99
FCF1-207ENST00000554973 AKAP12Q02952 1782 aa2.64□□□□□ -1.99
FCF1-207ENST00000554973 ROBO1Q9Y6N7 1651 aa2.64□□□□□ -1.99
FCF1-207ENST00000554973 CASP8AP2Q9UKL3 1982 aa2.64□□□□□ -1.99
FCF1-207ENST00000554973 TRAV23DV6A0A075B6W5 121 aa2.64□□□□□ -1.99
FCF1-207ENST00000554973 FAM24AA6NFZ4 105 aa2.64□□□□□ -1.99
FCF1-207ENST00000554973 TFF1P04155 84 aa2.64□□□□□ -1.99
FCF1-207ENST00000554973 NCMAPQ5T1S8 102 aa2.64□□□□□ -1.99
FCF1-207ENST00000554973 GDF5OSQ5U4N7 250 aa2.64□□□□□ -1.99
FCF1-207ENST00000554973 MRPL35Q9NZE8 188 aaKnown RBP2.64□□□□□ -1.99
FCF1-207ENST00000554973 SPHKAPQ2M3C7 1700 aa2.64□□□□□ -1.99
FCF1-207ENST00000554973 TRBV10-3A0A0K0K1G6 114 aa2.63□□□□□ -1.99
FCF1-207ENST00000554973 SPATA45Q537H7 98 aa2.63□□□□□ -1.99
FCF1-207ENST00000554973 C5orf38Q86SI9 138 aa2.63□□□□□ -1.99
FCF1-207ENST00000554973 IFI27L1Q96BM0 104 aa2.63□□□□□ -1.99
FCF1-207ENST00000554973 COL5A1P20908 1838 aaPredicted RBP2.63□□□□□ -1.99
FCF1-207ENST00000554973 TTC37Q6PGP7 1564 aa2.62□□□□□ -1.99
FCF1-207ENST00000554973 CPSF1Q10570 1443 aaKnown RBP2.62□□□□□ -1.99
FCF1-207ENST00000554973 KDM6BO15054 1643 aa2.62□□□□□ -1.99
FCF1-207ENST00000554973 IGKV3D-7A0A0C4DH55 119 aa2.62□□□□□ -1.99
FCF1-207ENST00000554973 IGKV3OR2-268A0A0C4DH90 116 aa2.62□□□□□ -1.99
FCF1-207ENST00000554973 ATP5EP56381 51 aaPredicted RBP2.62□□□□□ -1.99
FCF1-207ENST00000554973 RBM3P98179 157 aaKnown RBP2.62□□□□□ -1.99
FCF1-207ENST00000554973 SNRNP200O75643 2136 aaKnown RBP2.62□□□□□ -1.99
FCF1-207ENST00000554973 TET1Q8NFU7 2136 aa2.62□□□□□ -1.99
FCF1-207ENST00000554973 TRBV6-7A0A0A0MS04 114 aa2.61□□□□□ -1.99
FCF1-207ENST00000554973 TRAV12-3A0A0B4J271 114 aa2.61□□□□□ -1.99
FCF1-207ENST00000554973 HIGD1CA8MV81 97 aa2.61□□□□□ -1.99
FCF1-207ENST00000554973 CCKP06307 115 aa2.61□□□□□ -1.99
FCF1-207ENST00000554973 S100A10P60903 97 aa2.61□□□□□ -1.99
FCF1-207ENST00000554973 RPL37AP61513 92 aaKnown RBP2.61□□□□□ -1.99
FCF1-207ENST00000554973 DLEC1Q9Y238 1755 aa2.61□□□□□ -1.99
FCF1-207ENST00000554973 PRRC2BQ5JSZ5 2229 aaKnown RBP2.61□□□□□ -1.99
FCF1-207ENST00000554973 PHRF1Q9P1Y6 1649 aaKnown RBP2.6□□□□□ -1.99
FCF1-207ENST00000554973 TMEM262E9PQX1 116 aa2.6□□□□□ -1.99
FCF1-207ENST00000554973 KRTAP6-3Q3LI67 103 aa2.6□□□□□ -1.99
FCF1-207ENST00000554973 C10orf82Q8WW14 230 aa2.6□□□□□ -1.99
FCF1-207ENST00000554973 NWD2Q9ULI1 1742 aa2.59□□□□□ -1.99
FCF1-207ENST00000554973 UBE2L5PA0A1B0GUS4 154 aa2.59□□□□□ -1.99
FCF1-207ENST00000554973 IL9P15248 144 aa2.59□□□□□ -1.99
FCF1-207ENST00000554973 UBE2L3P68036 154 aaKnown RBP2.59□□□□□ -1.99
FCF1-207ENST00000554973 DEFB132Q7Z7B7 95 aa2.59□□□□□ -1.99
FCF1-207ENST00000554973 SBSPONQ8IVN8 264 aa2.59□□□□□ -1.99
FCF1-207ENST00000554973 C4orf33Q8N1A6 199 aa2.59□□□□□ -1.99
FCF1-207ENST00000554973 SPTSSBQ8NFR3 76 aa2.59□□□□□ -1.99
FCF1-207ENST00000554973 AMELYQ99218 206 aa2.59□□□□□ -1.99
FCF1-207ENST00000554973 ABCA4P78363 2273 aa2.58□□□□□ -2
FCF1-207ENST00000554973 SSSCA1O60232 199 aa2.58□□□□□ -2
FCF1-207ENST00000554973 GNG2P59768 71 aa2.58□□□□□ -2
FCF1-207ENST00000554973 CCL8P80075 99 aa2.58□□□□□ -2
FCF1-207ENST00000554973 COL5A1-AS1Q5SY13 56 aa2.58□□□□□ -2
FCF1-207ENST00000554973 COMMD6Q7Z4G1 85 aa2.58□□□□□ -2
FCF1-207ENST00000554973 OBSCN-AS1Q96MR7 158 aa2.58□□□□□ -2
FCF1-207ENST00000554973 C10orf71Q711Q0 1435 aa2.58□□□□□ -2
FCF1-207ENST00000554973 MYH8P13535 1937 aa2.58□□□□□ -2
FCF1-207ENST00000554973 ANKRD26Q9UPS8 1709 aa2.57□□□□□ -2
FCF1-207ENST00000554973 TRAV13-2A0A0B4J235 113 aa2.57□□□□□ -2
FCF1-207ENST00000554973 TEX49A0A1B0GTD5 131 aa2.57□□□□□ -2
FCF1-207ENST00000554973 DCDP81605 110 aaKnown RBP2.57□□□□□ -2
FCF1-207ENST00000554973 PP632Q6XCG6 107 aa2.57□□□□□ -2
FCF1-207ENST00000554973 DPH3P1Q9H4G8 78 aa2.57□□□□□ -2
FCF1-207ENST00000554973 RB1CC1Q8TDY2 1594 aa2.57□□□□□ -2
FCF1-207ENST00000554973 CC2D2AQ9P2K1 1620 aa2.57□□□□□ -2
FCF1-207ENST00000554973 PATJQ8NI35 1801 aa2.56□□□□□ -2
FCF1-207ENST00000554973 H3BQ15 152 aa2.56□□□□□ -2
FCF1-207ENST00000554973 MPC2O95563 127 aa2.56□□□□□ -2
FCF1-207ENST00000554973 KRTAP12-1P59990 96 aa2.56□□□□□ -2
FCF1-207ENST00000554973 CYP2G1PQ6ZSU1 146 aa2.56□□□□□ -2
FCF1-207ENST00000554973 SNHG12Q9BXW3 62 aa2.56□□□□□ -2
FCF1-207ENST00000554973 ARHGAP5Q13017 1502 aa2.56□□□□□ -2
FCF1-207ENST00000554973 SHROOM2Q13796 1616 aa2.56□□□□□ -2
FCF1-207ENST00000554973 COL4A1P02462 1669 aa2.56□□□□□ -2
FCF1-207ENST00000554973 ESPL1Q14674 2120 aa2.56□□□□□ -2
FCF1-207ENST00000554973 IGKV2-40A0A087WW87 121 aaPredicted RBP2.55□□□□□ -2
FCF1-207ENST00000554973 IGKV2D-40P01614 121 aaPredicted RBP2.55□□□□□ -2
FCF1-207ENST00000554973 TROQ12816 1431 aaPredicted RBP2.55□□□□□ -2
FCF1-207ENST00000554973 ZNF818PQ6ZRF7 136 aa2.55□□□□□ -2
FCF1-207ENST00000554973 RREB1Q92766 1687 aa2.55□□□□□ -2
FCF1-207ENST00000554973 TNS1Q9HBL0 1735 aaKnown RBP2.55□□□□□ -2
FCF1-207ENST00000554973 DOCK1Q14185 1865 aa2.54□□□□□ -2
FCF1-207ENST00000554973 LOC101927531A0A1B0GV80 90 aa2.54□□□□□ -2
FCF1-207ENST00000554973 UBE2D1P51668 147 aa2.54□□□□□ -2
FCF1-207ENST00000554973 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
FCF1-207ENST00000554973 ARAP2Q8WZ64 1704 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms