RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ZFP82Q8N141 532 aa8.73□□□□□ -1.01
ACTN1-207ENST00000553290 MLST8Q9BVC4 326 aa8.73□□□□□ -1.01
ACTN1-207ENST00000553290 HSPG2P98160 4391 aa8.72□□□□□ -1.01
ACTN1-207ENST00000553290 TEX46H3BTG2 121 aa8.72□□□□□ -1.01
ACTN1-207ENST00000553290 M0R381 172 aa8.72□□□□□ -1.01
ACTN1-207ENST00000553290 CXCL1P09341 107 aa8.72□□□□□ -1.01
ACTN1-207ENST00000553290 TCTE3Q8IZS6 198 aa8.72□□□□□ -1.01
ACTN1-207ENST00000553290 C14orf178Q8N769 122 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-207ENST00000553290 A0A087WWC5 75 aa8.71□□□□□ -1.02
ACTN1-207ENST00000553290 A0A087WWL8 130 aa8.71□□□□□ -1.02
ACTN1-207ENST00000553290 PSCAO43653 123 aa8.71□□□□□ -1.02
ACTN1-207ENST00000553290 IGHV3-30P01768 117 aa8.71□□□□□ -1.02
ACTN1-207ENST00000553290 IGHV3-33P01772 117 aa8.71□□□□□ -1.02
ACTN1-207ENST00000553290 IGHV3-30-3P0DP02 117 aa8.71□□□□□ -1.02
ACTN1-207ENST00000553290 IGHV3-30-5P0DP03 117 aa8.71□□□□□ -1.02
ACTN1-207ENST00000553290 MAPKAPK5-AS1Q8N8E1 139 aa8.71□□□□□ -1.02
ACTN1-207ENST00000553290 GNG13Q9P2W3 67 aa8.71□□□□□ -1.02
ACTN1-207ENST00000553290 RPL35P42766 123 aaKnown RBP8.7□□□□□ -1.02
ACTN1-207ENST00000553290 SULT1A2P50226 295 aa8.7□□□□□ -1.02
ACTN1-207ENST00000553290 CCL20P78556 96 aa8.7□□□□□ -1.02
ACTN1-207ENST00000553290 LAGE3Q14657 143 aa8.7□□□□□ -1.02
ACTN1-207ENST00000553290 C11orf52Q96A22 123 aa8.7□□□□□ -1.02
ACTN1-207ENST00000553290 Q9UF83 564 aa8.7□□□□□ -1.02
ACTN1-207ENST00000553290 TRBV10-1A0A0K0K1A3 114 aa8.69□□□□□ -1.02
ACTN1-207ENST00000553290 C1QBP02746 253 aa8.69□□□□□ -1.02
ACTN1-207ENST00000553290 RPL19P84098 196 aaKnown RBP8.69□□□□□ -1.02
ACTN1-207ENST00000553290 PRR27Q6MZM9 219 aa8.69□□□□□ -1.02
ACTN1-207ENST00000553290 SSBP4Q9BWG4 385 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-207ENST00000553290 Q9HAA7 133 aa8.69□□□□□ -1.02
ACTN1-207ENST00000553290 SNAI2O43623 268 aa8.68□□□□□ -1.02
ACTN1-207ENST00000553290 OR5AL1P0C617 328 aa8.68□□□□□ -1.02
ACTN1-207ENST00000553290 RPL36AP83881 106 aaKnown RBP8.68□□□□□ -1.02
ACTN1-207ENST00000553290 SLC51BQ86UW2 128 aa8.68□□□□□ -1.02
ACTN1-207ENST00000553290 Q8N1X5 172 aa8.68□□□□□ -1.02
ACTN1-207ENST00000553290 OR10AG1Q8NH19 301 aa8.68□□□□□ -1.02
ACTN1-207ENST00000553290 RPL36ALQ969Q0 106 aaKnown RBP8.68□□□□□ -1.02
ACTN1-207ENST00000553290 TM2D2Q9BX73 214 aa8.68□□□□□ -1.02
ACTN1-207ENST00000553290 KRTAP4-5Q9BYR2 181 aa8.68□□□□□ -1.02
ACTN1-207ENST00000553290 IFNA1P01562 189 aa8.67□□□□□ -1.02
ACTN1-207ENST00000553290 FUSP35637 526 aaKnown RBP eCLIP8.67□□□□□ -1.02
ACTN1-207ENST00000553290 RAB4BP61018 213 aa8.67□□□□□ -1.02
ACTN1-207ENST00000553290 TOR2AQ5JU69 321 aa8.67□□□□□ -1.02
ACTN1-207ENST00000553290 DNAH5Q8TE73 4624 aa8.67□□□□□ -1.02
ACTN1-207ENST00000553290 DERL1Q9BUN8 251 aa8.67□□□□□ -1.02
ACTN1-207ENST00000553290 APOBP04114 4563 aaKnown RBP8.66□□□□□ -1.02
ACTN1-207ENST00000553290 TRBV7-3A0A075B6L6 115 aa8.66□□□□□ -1.02
ACTN1-207ENST00000553290 TRAV8-3A0A0A6YYJ7 113 aa8.66□□□□□ -1.02
ACTN1-207ENST00000553290 LRCOL1A6NCL2 159 aa8.66□□□□□ -1.02
ACTN1-207ENST00000553290 PDE6DO43924 150 aa8.66□□□□□ -1.02
ACTN1-207ENST00000553290 MEF2BQ02080 365 aaPredicted RBP8.66□□□□□ -1.02
ACTN1-207ENST00000553290 SPANXN1Q5VSR9 72 aa8.66□□□□□ -1.02
ACTN1-207ENST00000553290 Q6ZNX1 250 aa8.66□□□□□ -1.02
ACTN1-207ENST00000553290 SMIM12Q96EX1 92 aa8.66□□□□□ -1.02
ACTN1-207ENST00000553290 URGCP-MRPS24S4R325 110 aa8.66□□□□□ -1.02
ACTN1-207ENST00000553290 GCSHP23434 173 aa8.65□□□□□ -1.02
ACTN1-207ENST00000553290 UBE2D3P61077 147 aa8.65□□□□□ -1.02
ACTN1-207ENST00000553290 UBE2D2P62837 147 aa8.65□□□□□ -1.02
ACTN1-207ENST00000553290 ZNF56Q15929 161 aa8.65□□□□□ -1.02
ACTN1-207ENST00000553290 CENPWQ5EE01 88 aa8.65□□□□□ -1.02
ACTN1-207ENST00000553290 DAZ4Q86SG3 579 aaKnown RBP8.65□□□□□ -1.02
ACTN1-207ENST00000553290 Q8N3U1 123 aa8.65□□□□□ -1.02
ACTN1-207ENST00000553290 OR10G8Q8NGN5 311 aa8.65□□□□□ -1.02
ACTN1-207ENST00000553290 NTN5Q8WTR8 489 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-207ENST00000553290 DAZAP1Q96EP5 407 aaKnown RBP8.65□□□□□ -1.02
ACTN1-207ENST00000553290 DAZ3Q9NR90 486 aaKnown RBP8.65□□□□□ -1.02
ACTN1-207ENST00000553290 IGLV2-8P01709 118 aa8.64□□□□□ -1.03
ACTN1-207ENST00000553290 TAGLN2P37802 199 aaKnown RBP8.64□□□□□ -1.03
ACTN1-207ENST00000553290 GNG4P50150 75 aa8.64□□□□□ -1.03
ACTN1-207ENST00000553290 RPS20P60866 119 aaKnown RBP8.64□□□□□ -1.03
ACTN1-207ENST00000553290 NIT1Q86X76 327 aa8.64□□□□□ -1.03
ACTN1-207ENST00000553290 CHCHD7Q9BUK0 85 aa8.64□□□□□ -1.03
ACTN1-207ENST00000553290 MED9Q9NWA0 146 aa8.64□□□□□ -1.03
ACTN1-207ENST00000553290 COX11Q9Y6N1 276 aa8.64□□□□□ -1.03
ACTN1-207ENST00000553290 IGLV5-52A0A0A0MRZ9 124 aa8.63□□□□□ -1.03
ACTN1-207ENST00000553290 MUC21A0A0G2JKD1 596 aa8.63□□□□□ -1.03
ACTN1-207ENST00000553290 MUC21A0A140T8X8 626 aa8.63□□□□□ -1.03
ACTN1-207ENST00000553290 RAB19A4D1S5 217 aa8.63□□□□□ -1.03
ACTN1-207ENST00000553290 F5H697 171 aa8.63□□□□□ -1.03
ACTN1-207ENST00000553290 SMIM17P0DL12 118 aa8.63□□□□□ -1.03
ACTN1-207ENST00000553290 BCL2P10415 239 aa8.63□□□□□ -1.03
ACTN1-207ENST00000553290 KRTAP10-1P60331 282 aa8.63□□□□□ -1.03
ACTN1-207ENST00000553290 KCNIP4Q6PIL6 250 aa8.63□□□□□ -1.03
ACTN1-207ENST00000553290 AKAP14Q86UN6 197 aa8.63□□□□□ -1.03
ACTN1-207ENST00000553290 Q8N814 137 aa8.63□□□□□ -1.03
ACTN1-207ENST00000553290 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.63□□□□□ -1.03
ACTN1-207ENST00000553290 NEXN-AS1Q8NBZ9 246 aa8.63□□□□□ -1.03
ACTN1-207ENST00000553290 OR2D3Q8NGH3 330 aa8.63□□□□□ -1.03
ACTN1-207ENST00000553290 AP1S3Q96PC3 154 aa8.63□□□□□ -1.03
ACTN1-207ENST00000553290 BIN3Q9NQY0 253 aa8.63□□□□□ -1.03
ACTN1-207ENST00000553290 VAX2Q9UIW0 290 aa8.63□□□□□ -1.03
ACTN1-207ENST00000553290 ABCA13Q86UQ4 5058 aa8.62□□□□□ -1.03
ACTN1-207ENST00000553290 A0A087WX48 190 aa8.62□□□□□ -1.03
ACTN1-207ENST00000553290 XKRY2A2RUG3 117 aa8.62□□□□□ -1.03
ACTN1-207ENST00000553290 C19orf71A6NCJ1 209 aa8.62□□□□□ -1.03
ACTN1-207ENST00000553290 IGLC6P0CF74 106 aa8.62□□□□□ -1.03
ACTN1-207ENST00000553290 ELOBQ15370 118 aa8.62□□□□□ -1.03
ACTN1-207ENST00000553290 FER1L6-AS1Q8NA97 138 aa8.62□□□□□ -1.03
ACTN1-207ENST00000553290 RMI2Q96E14 147 aa8.62□□□□□ -1.03
ACTN1-207ENST00000553290 TRBV6-8A0A0A6YYG3 113 aa8.61□□□□□ -1.03
ACTN1-207ENST00000553290 P01737 135 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms