RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 IGLV1-51P01701 117 aa1.31□□□□□ -2.2
TSPAN8-205ENST00000550818 CLPSP04118 112 aa1.31□□□□□ -2.2
TSPAN8-205ENST00000550818 CKS2P33552 79 aa1.31□□□□□ -2.2
TSPAN8-205ENST00000550818 ROMO1P60602 79 aa1.31□□□□□ -2.2
TSPAN8-205ENST00000550818 PCBD1P61457 104 aa1.31□□□□□ -2.2
TSPAN8-205ENST00000550818 UBE2L3P68036 154 aaKnown RBP1.31□□□□□ -2.2
TSPAN8-205ENST00000550818 TDRG1Q3Y452 100 aa1.31□□□□□ -2.2
TSPAN8-205ENST00000550818 Q6ZSA8 131 aa1.31□□□□□ -2.2
TSPAN8-205ENST00000550818 ZNF720Q7Z2F6 126 aa1.31□□□□□ -2.2
TSPAN8-205ENST00000550818 C5orf38Q86SI9 138 aa1.31□□□□□ -2.2
TSPAN8-205ENST00000550818 CHCHD1Q96BP2 118 aaKnown RBP1.31□□□□□ -2.2
TSPAN8-205ENST00000550818 LINC01600Q96MT4 127 aa1.31□□□□□ -2.2
TSPAN8-205ENST00000550818 UQCR10Q9UDW1 63 aa1.31□□□□□ -2.2
TSPAN8-205ENST00000550818 PRRC2BQ5JSZ5 2229 aaKnown RBP1.31□□□□□ -2.2
TSPAN8-205ENST00000550818 ABCC5O15440 1437 aa1.31□□□□□ -2.2
TSPAN8-205ENST00000550818 MYH4Q9Y623 1939 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 ARHGEF12Q9NZN5 1544 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 EML5Q05BV3 1969 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 TOPAZ1Q8N9V7 1692 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 ROBO1Q9Y6N7 1651 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 KNDC1Q76NI1 1749 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 PEAK1Q9H792 1746 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 LAMB1P07942 1786 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 PIGBOS1A0A0B4J2F0 54 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 RBAKDNA6NC62 111 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 J3QLW9 94 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 M0R129 80 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 TIMM17BO60830 172 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 SNCGO76070 127 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 NMBP08949 121 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 SSR2P43308 183 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 CIRBPQ14011 172 aaKnown RBP1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 DEFB119Q8N690 84 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 Q8N8P6 123 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 CLEC2BQ92478 149 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 AQP3Q92482 292 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 TSLPQ969D9 159 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 ANKARQ7Z5J8 1434 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 NRXN1Q9ULB1 1477 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 FREM1Q5H8C1 2179 aa1.3□□□□□ -2.2
TSPAN8-205ENST00000550818 CCDC180Q9P1Z9 1646 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 USP54Q70EL1 1684 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 KIF21AQ7Z4S6 1674 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 LAMB4A4D0S4 1761 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 RGPD3A6NKT7 1758 aaPredicted RBP1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 LTN1O94822 1766 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 HEATR5BQ9P2D3 2071 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 TRAV3A0A0B4J244 114 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 IGHV1-24A0A0C4DH33 117 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 hDV103S1A0JD37 113 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 H3BRM9 83 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 UBL3O95164 117 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 SFT2D2O95562 160 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 CYB5AP00167 134 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 APOC3P02656 99 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 IL5P05113 134 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 SLC25A6P12236 298 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 PIPP12273 146 aaPredicted RBP1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 POLR2JP52435 117 aaKnown RBP1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 DSCR4P56555 118 aaPredicted RBP1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 SEC11AP67812 179 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 ESRGQ1W209 222 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 UNQ5815/PRO19632Q6UWF5 114 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 Q8IYB0 196 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 LINC00269Q8N2A0 174 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 Q8N814 137 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 ZNF431Q8TF32 576 aaPredicted RBP1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 SPTSSAQ969W0 71 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 DSCR8Q96T75 97 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 RETNLBQ9BQ08 111 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 C14orf132Q9NPU4 83 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 BRWD1Q9NSI6 2320 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 CFAP74Q9C0B2 1584 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 LAMC3Q9Y6N6 1575 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 KDM6BO15054 1643 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 CC2D2AQ9P2K1 1620 aa1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 SUPT6HQ7KZ85 1726 aaKnown RBP1.29□□□□□ -2.2
TSPAN8-205ENST00000550818 MYOFQ9NZM1 2061 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 E7EUB6 86 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 ATOX1O00244 68 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 NDUFC1O43677 76 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 BCE1O60756 84 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 IGKCP01834 107 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 CCKP06307 115 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 BAALC-AS2P0C853 105 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 MIFP14174 115 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 CBLN1P23435 193 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 KRTDAPP60985 99 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 CCL8P80075 99 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 HMGN3Q15651 99 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 SPANXN5Q5MJ07 72 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 SPANXN1Q5VSR9 72 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 ALKAL2Q6UX46 152 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 ZNF826PQ6ZT77 177 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 SLC25A26Q70HW3 274 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 COMMD6Q7Z4G1 85 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 C10orf105Q8TEF2 133 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 DYNLRB2Q8TF09 96 aa1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 S100A16Q96FQ6 103 aaKnown RBP1.28□□□□□ -2.2
TSPAN8-205ENST00000550818 TRGV9Q99603 122 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms