RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
TSPAN8-205ENST00000550818 CHIC1Q5VXU3 224 aa24.03■■□□□ 1.44
TSPAN8-205ENST00000550818 SENP3Q9H4L4 574 aaPredicted RBP22■■□□□ 1.11
TSPAN8-205ENST00000550818 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
TSPAN8-205ENST00000550818 FOXD1Q16676 465 aa20.6■□□□□ 0.89
TSPAN8-205ENST00000550818 POTEDQ86YR6 584 aa19.72■□□□□ 0.75
TSPAN8-205ENST00000550818 MSH5O43196 834 aa19.39■□□□□ 0.69
TSPAN8-205ENST00000550818 PIAS4Q8N2W9 510 aaPredicted RBP19.11■□□□□ 0.65
TSPAN8-205ENST00000550818 PPP6R1Q9UPN7 881 aa18.97■□□□□ 0.63
TSPAN8-205ENST00000550818 PLPPR3Q6T4P5 718 aa18.96■□□□□ 0.63
TSPAN8-205ENST00000550818 ADRA2BP18089 450 aa18.85■□□□□ 0.61
TSPAN8-205ENST00000550818 MAPK8IP2Q13387 824 aaPredicted RBP17.47■□□□□ 0.39
TSPAN8-205ENST00000550818 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
TSPAN8-205ENST00000550818 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
TSPAN8-205ENST00000550818 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
TSPAN8-205ENST00000550818 DCAF8L1A6NGE4 600 aa16.66■□□□□ 0.26
TSPAN8-205ENST00000550818 HOXD11P31277 338 aaPredicted RBP16.59■□□□□ 0.25
TSPAN8-205ENST00000550818 PPP4R3CPQ6ZMV5 832 aa16.59■□□□□ 0.25
TSPAN8-205ENST00000550818 RNF39Q9H2S5 420 aa16.56■□□□□ 0.24
TSPAN8-205ENST00000550818 CNKSR2Q8WXI2 1034 aa16.36■□□□□ 0.21
TSPAN8-205ENST00000550818 RNF216Q9NWF9 866 aaPredicted RBP16.33■□□□□ 0.2
TSPAN8-205ENST00000550818 C1QBPQ07021 282 aaKnown RBP16.25■□□□□ 0.19
TSPAN8-205ENST00000550818 DNAJC5BQ9UF47 199 aa16.09■□□□□ 0.17
TSPAN8-205ENST00000550818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.78■□□□□ 0.12
TSPAN8-205ENST00000550818 NCBP3Q53F19 620 aaKnown RBP15.77■□□□□ 0.12
TSPAN8-205ENST00000550818 NPM3O75607 178 aaKnown RBP15.61■□□□□ 0.09
TSPAN8-205ENST00000550818 U3KPZ7 1027 aaPredicted RBP15.43■□□□□ 0.06
TSPAN8-205ENST00000550818 SPINK5Q9NQ38 1064 aaPredicted RBP15.36■□□□□ 0.05
TSPAN8-205ENST00000550818 DSG3P32926 999 aa15.35■□□□□ 0.05
TSPAN8-205ENST00000550818 POTEHQ6S545 545 aa15.35■□□□□ 0.05
TSPAN8-205ENST00000550818 CAPN15O75808 1086 aa15.29■□□□□ 0.04
TSPAN8-205ENST00000550818 SLC4A2P04920 1241 aa15.05■□□□□ -0
TSPAN8-205ENST00000550818 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
TSPAN8-205ENST00000550818 KCNA4P22459 653 aa14.94□□□□□ -0.02
TSPAN8-205ENST00000550818 ABCB7O75027 752 aa14.93□□□□□ -0.02
TSPAN8-205ENST00000550818 ZNF219Q9P2Y4 722 aaPredicted RBP14.88□□□□□ -0.03
TSPAN8-205ENST00000550818 APLP2Q06481 763 aa14.85□□□□□ -0.03
TSPAN8-205ENST00000550818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.77□□□□□ -0.05
TSPAN8-205ENST00000550818 HNRNPUL2Q1KMD3 747 aaKnown RBP14.77□□□□□ -0.05
TSPAN8-205ENST00000550818 SAMD1Q6SPF0 538 aaPredicted RBP14.69□□□□□ -0.06
TSPAN8-205ENST00000550818 RBM42Q9BTD8 480 aaKnown RBP14.59□□□□□ -0.07
TSPAN8-205ENST00000550818 CHRDL2Q6WN34 429 aa14.5□□□□□ -0.09
TSPAN8-205ENST00000550818 POLA2Q14181 598 aa14.48□□□□□ -0.09
TSPAN8-205ENST00000550818 MYCNP04198 464 aaPredicted RBP14.4□□□□□ -0.1
TSPAN8-205ENST00000550818 AKT1S1Q96B36 256 aa14.2□□□□□ -0.14
TSPAN8-205ENST00000550818 ATF5Q9Y2D1 282 aaPredicted RBP14.19□□□□□ -0.14
TSPAN8-205ENST00000550818 SP7Q8TDD2 431 aaPredicted RBP14.18□□□□□ -0.14
TSPAN8-205ENST00000550818 REM2Q8IYK8 340 aaPredicted RBP14.09□□□□□ -0.15
TSPAN8-205ENST00000550818 ZBTB12Q9Y330 459 aaPredicted RBP14.09□□□□□ -0.15
TSPAN8-205ENST00000550818 PIP4P2Q8N4L2 257 aa14.08□□□□□ -0.16
TSPAN8-205ENST00000550818 OSCARQ8IYS5 282 aa14.03□□□□□ -0.16
TSPAN8-205ENST00000550818 FOXD4L1Q9NU39 408 aa14.03□□□□□ -0.16
TSPAN8-205ENST00000550818 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
TSPAN8-205ENST00000550818 PITPNM1O00562 1244 aa13.95□□□□□ -0.18
TSPAN8-205ENST00000550818 HAX1O00165 279 aa13.91□□□□□ -0.18
TSPAN8-205ENST00000550818 FXR2P51116 673 aaKnown RBP eCLIP13.91□□□□□ -0.18
TSPAN8-205ENST00000550818 EVX2Q03828 476 aa13.78□□□□□ -0.2
TSPAN8-205ENST00000550818 ZBTB22O15209 634 aa13.77□□□□□ -0.21
TSPAN8-205ENST00000550818 SPDYE2BA6NHP3 402 aa13.65□□□□□ -0.22
TSPAN8-205ENST00000550818 SPDYE6P0CI01 402 aa13.65□□□□□ -0.22
TSPAN8-205ENST00000550818 SPDYE2Q495Y8 402 aa13.65□□□□□ -0.22
TSPAN8-205ENST00000550818 ATXN8OSP0DMR3 200 aa13.64□□□□□ -0.23
TSPAN8-205ENST00000550818 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
TSPAN8-205ENST00000550818 FBLN2P98095 1184 aa13.56□□□□□ -0.24
TSPAN8-205ENST00000550818 SPDYE1Q8NFV5 336 aaPredicted RBP13.51□□□□□ -0.25
TSPAN8-205ENST00000550818 CLEC11AQ9Y240 323 aa13.51□□□□□ -0.25
TSPAN8-205ENST00000550818 MKRN4PQ13434 485 aaPredicted RBP13.5□□□□□ -0.25
TSPAN8-205ENST00000550818 C19orf67A6NJJ6 358 aa13.49□□□□□ -0.25
TSPAN8-205ENST00000550818 SSUH2Q9Y2M2 353 aa13.45□□□□□ -0.26
TSPAN8-205ENST00000550818 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
TSPAN8-205ENST00000550818 GABBR2O75899 941 aa13.39□□□□□ -0.27
TSPAN8-205ENST00000550818 CHADLQ6NUI6 762 aa13.33□□□□□ -0.28
TSPAN8-205ENST00000550818 LHX8Q68G74 356 aa13.29□□□□□ -0.28
TSPAN8-205ENST00000550818 PRR29P0C7W0 189 aa13.22□□□□□ -0.29
TSPAN8-205ENST00000550818 PABPN1Q86U42 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
TSPAN8-205ENST00000550818 POTEIP0CG38 1075 aa13.14□□□□□ -0.31
TSPAN8-205ENST00000550818 CD44P16070 742 aaKnown RBP13.1□□□□□ -0.31
TSPAN8-205ENST00000550818 FARP1Q9Y4F1 1045 aaPredicted RBP13.09□□□□□ -0.31
TSPAN8-205ENST00000550818 CLCN6P51797 869 aa12.97□□□□□ -0.33
TSPAN8-205ENST00000550818 DCBLD2Q96PD2 775 aa12.9□□□□□ -0.34
TSPAN8-205ENST00000550818 ZNF579Q8NAF0 562 aaKnown RBP12.89□□□□□ -0.35
TSPAN8-205ENST00000550818 CREBZFQ9NS37 354 aa12.84□□□□□ -0.35
TSPAN8-205ENST00000550818 ZRANB1Q9UGI0 708 aa12.84□□□□□ -0.35
TSPAN8-205ENST00000550818 GALR2O43603 387 aaPredicted RBP12.78□□□□□ -0.36
TSPAN8-205ENST00000550818 PLSCR2Q9NRY7 297 aa12.78□□□□□ -0.36
TSPAN8-205ENST00000550818 OTUD5Q96G74 571 aa12.73□□□□□ -0.37
TSPAN8-205ENST00000550818 STAG3Q9UJ98 1225 aa12.72□□□□□ -0.37
TSPAN8-205ENST00000550818 POTEB2H3BUK9 544 aa12.71□□□□□ -0.37
TSPAN8-205ENST00000550818 CSRNP3Q8WYN3 585 aa12.7□□□□□ -0.38
TSPAN8-205ENST00000550818 PHF12Q96QT6 1004 aa12.66□□□□□ -0.38
TSPAN8-205ENST00000550818 PELP1Q8IZL8 1130 aaKnown RBP12.61□□□□□ -0.39
TSPAN8-205ENST00000550818 SPDYE4A6NLX3 237 aa12.59□□□□□ -0.39
TSPAN8-205ENST00000550818 PAK3O75914 559 aaPredicted RBP12.59□□□□□ -0.39
TSPAN8-205ENST00000550818 MNX1P50219 401 aaPredicted RBP12.59□□□□□ -0.39
TSPAN8-205ENST00000550818 POTEMA6NI47 508 aa12.53□□□□□ -0.4
TSPAN8-205ENST00000550818 NPM1P06748 294 aaKnown RBP eCLIP12.52□□□□□ -0.41
TSPAN8-205ENST00000550818 POTEGQ6S5H5 508 aa12.49□□□□□ -0.41
TSPAN8-205ENST00000550818 ASTLQ6HA08 431 aaPredicted RBP12.48□□□□□ -0.41
TSPAN8-205ENST00000550818 POTEJP0CG39 1038 aa12.47□□□□□ -0.41
TSPAN8-205ENST00000550818 MS4A3Q96HJ5 214 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms