RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 OR5AL1P0C617 328 aa16.48■□□□□ 0.23
RBFOX1-209ENST00000547427 SSTP61278 116 aa16.48■□□□□ 0.23
RBFOX1-209ENST00000547427 KRTAP1-5Q9BYS1 174 aa16.48■□□□□ 0.23
RBFOX1-209ENST00000547427 ATP6V0E2Q8NHE4 81 aa16.47■□□□□ 0.23
RBFOX1-209ENST00000547427 TPPP3Q9BW30 176 aa16.47■□□□□ 0.23
RBFOX1-209ENST00000547427 SSBP4Q9BWG4 385 aaPredicted RBP16.47■□□□□ 0.23
RBFOX1-209ENST00000547427 LY96Q9Y6Y9 160 aa16.47■□□□□ 0.23
RBFOX1-209ENST00000547427 GAGE12JA6NER3 117 aa16.46■□□□□ 0.23
RBFOX1-209ENST00000547427 CRYGDP07320 174 aa16.46■□□□□ 0.23
RBFOX1-209ENST00000547427 GZMBP10144 247 aa16.46■□□□□ 0.23
RBFOX1-209ENST00000547427 GAGE1Q13065 139 aa16.46■□□□□ 0.23
RBFOX1-209ENST00000547427 GAGE4Q13068 117 aa16.46■□□□□ 0.23
RBFOX1-209ENST00000547427 GAGE5Q13069 117 aa16.46■□□□□ 0.23
RBFOX1-209ENST00000547427 GAGE13Q4V321 117 aa16.46■□□□□ 0.23
RBFOX1-209ENST00000547427 WFDC10BQ8IUB3 73 aa16.46■□□□□ 0.23
RBFOX1-209ENST00000547427 C14orf178Q8N769 122 aaPredicted RBP16.46■□□□□ 0.23
RBFOX1-209ENST00000547427 TIRAPP58753 221 aa16.45■□□□□ 0.22
RBFOX1-209ENST00000547427 FER1L6-AS1Q8NA97 138 aa16.45■□□□□ 0.22
RBFOX1-209ENST00000547427 FAM210AQ96ND0 272 aa16.45■□□□□ 0.22
RBFOX1-209ENST00000547427 TRAV9-2A0A087WT02 112 aa16.44■□□□□ 0.22
RBFOX1-209ENST00000547427 OCC1Q8TAD7 63 aa16.44■□□□□ 0.22
RBFOX1-209ENST00000547427 TRAV8-6A0A0B4J262 113 aa16.43■□□□□ 0.22
RBFOX1-209ENST00000547427 ZNF56Q15929 161 aa16.43■□□□□ 0.22
RBFOX1-209ENST00000547427 OR10J3Q5JRS4 329 aa16.43■□□□□ 0.22
RBFOX1-209ENST00000547427 TEX261Q6UWH6 196 aa16.43■□□□□ 0.22
RBFOX1-209ENST00000547427 NUDT10Q8NFP7 164 aa16.43■□□□□ 0.22
RBFOX1-209ENST00000547427 NUDT11Q96G61 164 aa16.43■□□□□ 0.22
RBFOX1-209ENST00000547427 GTSF1LQ9H1H1 148 aa16.43■□□□□ 0.22
RBFOX1-209ENST00000547427 SMIM17P0DL12 118 aa16.42■□□□□ 0.22
RBFOX1-209ENST00000547427 EVI2AP22794 236 aa16.42■□□□□ 0.22
RBFOX1-209ENST00000547427 DNAH2Q9P225 4427 aa16.41■□□□□ 0.22
RBFOX1-209ENST00000547427 K7EN84 100 aa16.41■□□□□ 0.22
RBFOX1-209ENST00000547427 IGLC6P0CF74 106 aa16.41■□□□□ 0.22
RBFOX1-209ENST00000547427 BTF3P20290 206 aaKnown RBP16.4■□□□□ 0.22
RBFOX1-209ENST00000547427 AP1S3Q96PC3 154 aa16.4■□□□□ 0.22
RBFOX1-209ENST00000547427 RNASE7Q9H1E1 156 aaKnown RBP16.4■□□□□ 0.22
RBFOX1-209ENST00000547427 Q9UF83 564 aa16.4■□□□□ 0.22
RBFOX1-209ENST00000547427 A0A1B0GVY2 172 aa16.39■□□□□ 0.21
RBFOX1-209ENST00000547427 F2Z2F3 143 aa16.39■□□□□ 0.21
RBFOX1-209ENST00000547427 F5H697 171 aa16.39■□□□□ 0.21
RBFOX1-209ENST00000547427 DNAH10OSP0CZ25 163 aa16.39■□□□□ 0.21
RBFOX1-209ENST00000547427 LINC00315P59091 139 aa16.39■□□□□ 0.21
RBFOX1-209ENST00000547427 RAB4BP61018 213 aa16.39■□□□□ 0.21
RBFOX1-209ENST00000547427 CACNG7P62955 275 aa16.39■□□□□ 0.21
RBFOX1-209ENST00000547427 TNP2Q05952 138 aa16.39■□□□□ 0.21
RBFOX1-209ENST00000547427 LELP1Q5T871 98 aa16.39■□□□□ 0.21
RBFOX1-209ENST00000547427 SMIM7Q9BQ49 75 aa16.39■□□□□ 0.21
RBFOX1-209ENST00000547427 RPP21Q9H633 154 aaKnown RBP16.39■□□□□ 0.21
RBFOX1-209ENST00000547427 IGHV3-38A0A0C4DH36 116 aa16.38■□□□□ 0.21
RBFOX1-209ENST00000547427 K7EP13 123 aa16.38■□□□□ 0.21
RBFOX1-209ENST00000547427 NDUFS6O75380 124 aaKnown RBP16.38■□□□□ 0.21
RBFOX1-209ENST00000547427 TRBV10-1A0A0K0K1A3 114 aa16.37■□□□□ 0.21
RBFOX1-209ENST00000547427 LINC00694P0DN24 101 aa16.37■□□□□ 0.21
RBFOX1-209ENST00000547427 RPL36AP83881 106 aaKnown RBP16.37■□□□□ 0.21
RBFOX1-209ENST00000547427 LYZL1Q6UWQ5 148 aa16.37■□□□□ 0.21
RBFOX1-209ENST00000547427 RPL36ALQ969Q0 106 aaKnown RBP16.37■□□□□ 0.21
RBFOX1-209ENST00000547427 BIRC6Q9NR09 4857 aa16.37■□□□□ 0.21
RBFOX1-209ENST00000547427 SRP19P09132 144 aaKnown RBP16.36■□□□□ 0.21
RBFOX1-209ENST00000547427 ZNF727A8MUV8 499 aa16.35■□□□□ 0.21
RBFOX1-209ENST00000547427 C10orf126Q8N4M7 172 aa16.35■□□□□ 0.21
RBFOX1-209ENST00000547427 A0A087WWC5 75 aa16.34■□□□□ 0.21
RBFOX1-209ENST00000547427 GATCO43716 136 aaKnown RBP16.34■□□□□ 0.21
RBFOX1-209ENST00000547427 MSRB1Q9NZV6 116 aa16.34■□□□□ 0.21
RBFOX1-209ENST00000547427 DNAH17Q9UFH2 4485 aa16.34■□□□□ 0.21
RBFOX1-209ENST00000547427 TRBV7-3A0A075B6L6 115 aa16.33■□□□□ 0.2
RBFOX1-209ENST00000547427 MGPP08493 103 aa16.33■□□□□ 0.2
RBFOX1-209ENST00000547427 ERVFC1-1P60608 527 aa16.33■□□□□ 0.2
RBFOX1-209ENST00000547427 LINC01556Q5JQF7 62 aa16.33■□□□□ 0.2
RBFOX1-209ENST00000547427 NFE4Q86UQ8 179 aa16.33■□□□□ 0.2
RBFOX1-209ENST00000547427 FAT2Q9NYQ8 4349 aa16.32■□□□□ 0.2
RBFOX1-209ENST00000547427 TRGC1P0CF51 173 aa16.32■□□□□ 0.2
RBFOX1-209ENST00000547427 NTF3P20783 257 aa16.32■□□□□ 0.2
RBFOX1-209ENST00000547427 FAM231DQ6ZW35 169 aa16.32■□□□□ 0.2
RBFOX1-209ENST00000547427 TNFRSF18Q9Y5U5 241 aa16.32■□□□□ 0.2
RBFOX1-209ENST00000547427 KIF25-AS1Q9Y6Z4 181 aa16.32■□□□□ 0.2
RBFOX1-209ENST00000547427 IGHV3-30P01768 117 aa16.31■□□□□ 0.2
RBFOX1-209ENST00000547427 IGHV3-33P01772 117 aa16.31■□□□□ 0.2
RBFOX1-209ENST00000547427 IGHV3-30-3P0DP02 117 aa16.31■□□□□ 0.2
RBFOX1-209ENST00000547427 IGHV3-30-5P0DP03 117 aa16.31■□□□□ 0.2
RBFOX1-209ENST00000547427 PEA15Q15121 130 aa16.31■□□□□ 0.2
RBFOX1-209ENST00000547427 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.31■□□□□ 0.2
RBFOX1-209ENST00000547427 HECTD4Q9Y4D8 3996 aa16.3■□□□□ 0.2
RBFOX1-209ENST00000547427 CTRLP40313 264 aa16.3■□□□□ 0.2
RBFOX1-209ENST00000547427 WDR73Q6P4I2 378 aa16.3■□□□□ 0.2
RBFOX1-209ENST00000547427 LINC01551Q86U37 167 aa16.3■□□□□ 0.2
RBFOX1-209ENST00000547427 NEXN-AS1Q8NBZ9 246 aa16.3■□□□□ 0.2
RBFOX1-209ENST00000547427 OR10G8Q8NGN5 311 aa16.3■□□□□ 0.2
RBFOX1-209ENST00000547427 A8MWL6 223 aa16.29■□□□□ 0.2
RBFOX1-209ENST00000547427 UBE2D3P61077 147 aa16.29■□□□□ 0.2
RBFOX1-209ENST00000547427 UBE2D2P62837 147 aa16.29■□□□□ 0.2
RBFOX1-209ENST00000547427 TWIST1Q15672 202 aa16.29■□□□□ 0.2
RBFOX1-209ENST00000547427 FAM74A3Q4VXF1 159 aa16.28■□□□□ 0.2
RBFOX1-209ENST00000547427 H7C1H1 209 aa16.27■□□□□ 0.2
RBFOX1-209ENST00000547427 TMEM241Q24JQ0 296 aa16.27■□□□□ 0.2
RBFOX1-209ENST00000547427 Q6ZRN7 208 aaPredicted RBP16.27■□□□□ 0.2
RBFOX1-209ENST00000547427 DPH3P1Q9H4G8 78 aa16.27■□□□□ 0.2
RBFOX1-209ENST00000547427 GTSF1Q8WW33 167 aa16.26■□□□□ 0.19
RBFOX1-209ENST00000547427 URGCP-MRPS24S4R325 110 aa16.26■□□□□ 0.19
RBFOX1-209ENST00000547427 SRSF3P84103 164 aaKnown RBP16.25■□□□□ 0.19
RBFOX1-209ENST00000547427 CT83Q5H943 113 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms