RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 SIVA1O15304 175 aa9.45□□□□□ -0.9
TNFSF13B-206ENST00000542136 SOHLH1Q5JUK2 328 aa9.45□□□□□ -0.9
TNFSF13B-206ENST00000542136 Q6ZSN1 163 aa9.45□□□□□ -0.9
TNFSF13B-206ENST00000542136 CNFNQ9BYD5 112 aa9.45□□□□□ -0.9
TNFSF13B-206ENST00000542136 RPP21Q9H633 154 aaKnown RBP9.45□□□□□ -0.9
TNFSF13B-206ENST00000542136 LOC100131303A0A0U1RQF7 123 aa9.44□□□□□ -0.9
TNFSF13B-206ENST00000542136 ZNF727A8MUV8 499 aa9.44□□□□□ -0.9
TNFSF13B-206ENST00000542136 M0R2N4 97 aa9.44□□□□□ -0.9
TNFSF13B-206ENST00000542136 LINC00694P0DN24 101 aa9.44□□□□□ -0.9
TNFSF13B-206ENST00000542136 CT83Q5H943 113 aa9.44□□□□□ -0.9
TNFSF13B-206ENST00000542136 C1orf134Q5TEV5 83 aa9.44□□□□□ -0.9
TNFSF13B-206ENST00000542136 LINC01551Q86U37 167 aa9.44□□□□□ -0.9
TNFSF13B-206ENST00000542136 A0A087WWL8 130 aa9.43□□□□□ -0.9
TNFSF13B-206ENST00000542136 A8MWL6 223 aa9.43□□□□□ -0.9
TNFSF13B-206ENST00000542136 CTRLP40313 264 aa9.43□□□□□ -0.9
TNFSF13B-206ENST00000542136 FOXA3P55318 350 aaPredicted RBP9.43□□□□□ -0.9
TNFSF13B-206ENST00000542136 RAB14P61106 215 aa9.43□□□□□ -0.9
TNFSF13B-206ENST00000542136 TMEM241Q24JQ0 296 aa9.43□□□□□ -0.9
TNFSF13B-206ENST00000542136 FAM74A4Q5TZK3 123 aa9.43□□□□□ -0.9
TNFSF13B-206ENST00000542136 ATP6V0E2Q8NHE4 81 aa9.43□□□□□ -0.9
TNFSF13B-206ENST00000542136 AP1S3Q96PC3 154 aa9.43□□□□□ -0.9
TNFSF13B-206ENST00000542136 RNASE7Q9H1E1 156 aaKnown RBP9.43□□□□□ -0.9
TNFSF13B-206ENST00000542136 GTSF1LQ9H1H1 148 aa9.43□□□□□ -0.9
TNFSF13B-206ENST00000542136 KIF25-AS1Q9Y6Z4 181 aa9.43□□□□□ -0.9
TNFSF13B-206ENST00000542136 PLECQ15149 4684 aaKnown RBP9.43□□□□□ -0.9
TNFSF13B-206ENST00000542136 ALMS1Q8TCU4 4167 aa9.42□□□□□ -0.9
TNFSF13B-206ENST00000542136 TRAV9-2A0A087WT02 112 aa9.42□□□□□ -0.9
TNFSF13B-206ENST00000542136 A0A087WWC5 75 aa9.42□□□□□ -0.9
TNFSF13B-206ENST00000542136 FAM231BA6NCW3 169 aa9.42□□□□□ -0.9
TNFSF13B-206ENST00000542136 SMIM17P0DL12 118 aa9.42□□□□□ -0.9
TNFSF13B-206ENST00000542136 GZMBP10144 247 aa9.42□□□□□ -0.9
TNFSF13B-206ENST00000542136 CEBPGP53567 150 aa9.42□□□□□ -0.9
TNFSF13B-206ENST00000542136 LYZL1Q6UWQ5 148 aa9.42□□□□□ -0.9
TNFSF13B-206ENST00000542136 OR10G8Q8NGN5 311 aa9.42□□□□□ -0.9
TNFSF13B-206ENST00000542136 OSTCQ9NRP0 149 aa9.42□□□□□ -0.9
TNFSF13B-206ENST00000542136 RTL8CO15255 209 aa9.41□□□□□ -0.9
TNFSF13B-206ENST00000542136 GATCO43716 136 aaKnown RBP9.41□□□□□ -0.9
TNFSF13B-206ENST00000542136 TRGC1P0CF51 173 aa9.41□□□□□ -0.9
TNFSF13B-206ENST00000542136 DNAH10OSP0CZ25 163 aa9.41□□□□□ -0.9
TNFSF13B-206ENST00000542136 LINC00315P59091 139 aa9.41□□□□□ -0.9
TNFSF13B-206ENST00000542136 ERVFC1-1P60608 527 aa9.41□□□□□ -0.9
TNFSF13B-206ENST00000542136 LELP1Q5T871 98 aa9.41□□□□□ -0.9
TNFSF13B-206ENST00000542136 C6orf223Q8N319 242 aa9.41□□□□□ -0.9
TNFSF13B-206ENST00000542136 C14orf178Q8N769 122 aaPredicted RBP9.41□□□□□ -0.9
TNFSF13B-206ENST00000542136 GFRA4Q9GZZ7 299 aa9.41□□□□□ -0.9
TNFSF13B-206ENST00000542136 TRBV7-3A0A075B6L6 115 aa9.4□□□□□ -0.9
TNFSF13B-206ENST00000542136 TRAV8-6A0A0B4J262 113 aa9.4□□□□□ -0.9
TNFSF13B-206ENST00000542136 C9JQL5 133 aa9.4□□□□□ -0.9
TNFSF13B-206ENST00000542136 NTF3P20783 257 aa9.4□□□□□ -0.9
TNFSF13B-206ENST00000542136 RPL36AP83881 106 aaKnown RBP9.4□□□□□ -0.9
TNFSF13B-206ENST00000542136 RPL36ALQ969Q0 106 aaKnown RBP9.4□□□□□ -0.9
TNFSF13B-206ENST00000542136 MUC21A0A0G2JKD1 596 aa9.39□□□□□ -0.91
TNFSF13B-206ENST00000542136 MUC21A0A140T8X8 626 aa9.39□□□□□ -0.91
TNFSF13B-206ENST00000542136 C15orf54Q8N8G6 183 aa9.39□□□□□ -0.91
TNFSF13B-206ENST00000542136 TPPP3Q9BW30 176 aa9.39□□□□□ -0.91
TNFSF13B-206ENST00000542136 MSRB1Q9NZV6 116 aa9.39□□□□□ -0.91
TNFSF13B-206ENST00000542136 NAT8Q9UHE5 227 aa9.39□□□□□ -0.91
TNFSF13B-206ENST00000542136 IGHV3-38A0A0C4DH36 116 aa9.38□□□□□ -0.91
TNFSF13B-206ENST00000542136 GAGE12JA6NER3 117 aa9.38□□□□□ -0.91
TNFSF13B-206ENST00000542136 H7C1H1 209 aa9.38□□□□□ -0.91
TNFSF13B-206ENST00000542136 EVI2AP22794 236 aa9.38□□□□□ -0.91
TNFSF13B-206ENST00000542136 SRSF3P84103 164 aaKnown RBP9.38□□□□□ -0.91
TNFSF13B-206ENST00000542136 GAGE1Q13065 139 aa9.38□□□□□ -0.91
TNFSF13B-206ENST00000542136 GAGE4Q13068 117 aa9.38□□□□□ -0.91
TNFSF13B-206ENST00000542136 GAGE5Q13069 117 aa9.38□□□□□ -0.91
TNFSF13B-206ENST00000542136 ZNF56Q15929 161 aa9.38□□□□□ -0.91
TNFSF13B-206ENST00000542136 GAGE13Q4V321 117 aa9.38□□□□□ -0.91
TNFSF13B-206ENST00000542136 CLLU1Q5K131 121 aa9.38□□□□□ -0.91
TNFSF13B-206ENST00000542136 C10orf126Q8N4M7 172 aa9.38□□□□□ -0.91
TNFSF13B-206ENST00000542136 TSKUQ8WUA8 353 aa9.38□□□□□ -0.91
TNFSF13B-206ENST00000542136 GTSF1Q8WW33 167 aa9.38□□□□□ -0.91
TNFSF13B-206ENST00000542136 ISOC2Q96AB3 205 aa9.38□□□□□ -0.91
TNFSF13B-206ENST00000542136 KRTAP1-5Q9BYS1 174 aa9.38□□□□□ -0.91
TNFSF13B-206ENST00000542136 Q9UF83 564 aa9.38□□□□□ -0.91
TNFSF13B-206ENST00000542136 F5H697 171 aa9.37□□□□□ -0.91
TNFSF13B-206ENST00000542136 UBE2D3P61077 147 aa9.37□□□□□ -0.91
TNFSF13B-206ENST00000542136 RPL23P62829 140 aaKnown RBP9.37□□□□□ -0.91
TNFSF13B-206ENST00000542136 UBE2D2P62837 147 aa9.37□□□□□ -0.91
TNFSF13B-206ENST00000542136 LINC01556Q5JQF7 62 aa9.37□□□□□ -0.91
TNFSF13B-206ENST00000542136 WFDC10BQ8IUB3 73 aa9.37□□□□□ -0.91
TNFSF13B-206ENST00000542136 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.37□□□□□ -0.91
TNFSF13B-206ENST00000542136 FRZBQ92765 325 aa9.37□□□□□ -0.91
TNFSF13B-206ENST00000542136 DNAJC30Q96LL9 226 aa9.37□□□□□ -0.91
TNFSF13B-206ENST00000542136 DPH3P1Q9H4G8 78 aa9.37□□□□□ -0.91
TNFSF13B-206ENST00000542136 DNAH1Q9P2D7 4330 aa9.37□□□□□ -0.91
TNFSF13B-206ENST00000542136 PRSS29PA6NIE9 313 aa9.36□□□□□ -0.91
TNFSF13B-206ENST00000542136 M0QY20 66 aa9.36□□□□□ -0.91
TNFSF13B-206ENST00000542136 SSTP61278 116 aa9.36□□□□□ -0.91
TNFSF13B-206ENST00000542136 OR10J3Q5JRS4 329 aa9.36□□□□□ -0.91
TNFSF13B-206ENST00000542136 NFE4Q86UQ8 179 aa9.36□□□□□ -0.91
TNFSF13B-206ENST00000542136 KMT2AQ03164 3969 aa9.36□□□□□ -0.91
TNFSF13B-206ENST00000542136 SACSQ9NZJ4 4579 aa9.36□□□□□ -0.91
TNFSF13B-206ENST00000542136 RYR2Q92736 4967 aa9.35□□□□□ -0.91
TNFSF13B-206ENST00000542136 IFITM2Q01629 132 aa9.35□□□□□ -0.91
TNFSF13B-206ENST00000542136 TWIST1Q15672 202 aa9.35□□□□□ -0.91
TNFSF13B-206ENST00000542136 TMEM97Q5BJF2 176 aa9.35□□□□□ -0.91
TNFSF13B-206ENST00000542136 SMIM15Q7Z3B0 74 aa9.35□□□□□ -0.91
TNFSF13B-206ENST00000542136 DAZ4Q86SG3 579 aaKnown RBP9.35□□□□□ -0.91
TNFSF13B-206ENST00000542136 NEXN-AS1Q8NBZ9 246 aa9.35□□□□□ -0.91
TNFSF13B-206ENST00000542136 DAZ3Q9NR90 486 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms