RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 MGST2Q99735 147 aa2.29□□□□□ -2.04
C2CD3-214ENST00000540057 ATP5SQ99766 215 aa2.29□□□□□ -2.04
C2CD3-214ENST00000540057 SLC39A9Q9NUM3 307 aa2.29□□□□□ -2.04
C2CD3-214ENST00000540057 TMEM14CQ9P0S9 112 aa2.29□□□□□ -2.04
C2CD3-214ENST00000540057 MTFP1Q9UDX5 166 aa2.29□□□□□ -2.04
C2CD3-214ENST00000540057 LENEPQ9Y5L5 61 aa2.29□□□□□ -2.04
C2CD3-214ENST00000540057 USH2AO75445 5202 aa2.29□□□□□ -2.04
C2CD3-214ENST00000540057 SYNE2Q8WXH0 6885 aaKnown RBP2.29□□□□□ -2.04
C2CD3-214ENST00000540057 TRBV6-8A0A0A6YYG3 113 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 TRAV1-1A0A0B4J248 108 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 TRAV21A0A0B4J279 112 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 RBAKDNA6NC62 111 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 H0Y9J4 135 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 APOA1P02647 267 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 METTL15P1P0C7V9 234 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 SLC25A6P12236 298 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 RPS10P46783 165 aaKnown RBP2.28□□□□□ -2.04
C2CD3-214ENST00000540057 TAS2R19P59542 299 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 TPRXLQ17RH7 258 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 UFSP1Q6NVU6 142 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 CROCCP3Q8IVE0 287 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 LINC00269Q8N2A0 174 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 ASB13Q8WXK3 278 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 DIRC1Q969H9 104 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 KCNS1Q96KK3 526 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 C9orf85Q96MD7 179 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 JPT2Q9H910 190 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 PSENENQ9NZ42 101 aa2.28□□□□□ -2.04
C2CD3-214ENST00000540057 CCDC59Q9P031 241 aaKnown RBP2.28□□□□□ -2.04
C2CD3-214ENST00000540057 FCGBPQ9Y6R7 5405 aaPredicted RBP2.28□□□□□ -2.04
C2CD3-214ENST00000540057 DUXBA0A1W2PPF3 345 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 A8MWV9 139 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 F6UZH7 168 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 MT-ND6P03923 174 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 IGLV7-43P04211 117 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 RNASE3P12724 160 aaKnown RBP2.27□□□□□ -2.05
C2CD3-214ENST00000540057 RPL13AP40429 203 aaKnown RBP2.27□□□□□ -2.05
C2CD3-214ENST00000540057 UBE2D1P51668 147 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 AQP4P55087 323 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 UBE2D3P61077 147 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 UBE2D2P62837 147 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 RBX1P62877 108 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 MT1HP80294 61 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 ZFP69Q49AA0 526 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 C1orf137Q5JT78 98 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 MIC13Q5XKP0 118 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 TMEM14EPQ6UXP3 125 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 Q6ZRG5 221 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 C12orf45Q8N5I9 185 aaPredicted RBP2.27□□□□□ -2.05
C2CD3-214ENST00000540057 C15orf56Q8N910 161 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 OR1L4Q8NGR5 311 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 TVP23CQ96ET8 276 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 OPRPNQ99935 248 aaPredicted RBP2.27□□□□□ -2.05
C2CD3-214ENST00000540057 RETNLBQ9BQ08 111 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 GPN1Q9HCN4 374 aaPredicted RBP2.27□□□□□ -2.05
C2CD3-214ENST00000540057 LINC00474Q9P2X8 69 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 COMMD3Q9UBI1 195 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 RABL2BQ9UNT1 228 aa2.27□□□□□ -2.05
C2CD3-214ENST00000540057 TRBV7-3A0A075B6L6 115 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 TRAV8-4A0A0B4J246 113 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 A0A1W2PNN7 141 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 DISC1C4P0D8 188 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 HPGDSO60760 199 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 PTTG1O95997 202 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 P01737 135 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 NBEAP1P0C6P0 100 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 GZMBP10144 247 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 ANXA3P12429 323 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 CAMLGP49069 296 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 RAB5CP51148 216 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 REG3AQ06141 175 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 LGALSLQ3ZCW2 172 aaPredicted RBP2.26□□□□□ -2.05
C2CD3-214ENST00000540057 HIGD2BQ4VC39 106 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 Q75L30 129 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 NRARPQ7Z6K4 114 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 ARL6IP6Q8N6S5 226 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 PHYHIPLQ96FC7 376 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 SMIM8Q96KF7 97 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 FAM167A-AS1Q96KT0 104 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 PFDN5Q99471 154 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 CHCHD5Q9BSY4 110 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 SLC25A2Q9BXI2 301 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 VCXQ9H320 206 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 BLOC1S6Q9UL45 172 aa2.26□□□□□ -2.05
C2CD3-214ENST00000540057 PIGBOS1A0A0B4J2F0 54 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 TRBV10-1A0A0K0K1A3 114 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 FAM25AB3EWG3 89 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 FAM25CB3EWG5 89 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 FAM25GB3EWG6 89 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 SSSCA1O60232 199 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 CSN1S1P47710 185 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 RPL29P47914 159 aaKnown RBP2.25□□□□□ -2.05
C2CD3-214ENST00000540057 ZNF80P51504 273 aaPredicted RBP2.25□□□□□ -2.05
C2CD3-214ENST00000540057 GABARAPL2P60520 117 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 PKIAP61925 76 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 CYCSP99999 105 aaKnown RBP2.25□□□□□ -2.05
C2CD3-214ENST00000540057 KRTAP19-2Q3LHN2 52 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 ASB16-AS1Q495Z4 193 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 FAM162BQ5T6X4 162 aa2.25□□□□□ -2.05
C2CD3-214ENST00000540057 LCE3AQ5TA76 89 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms