RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 TMEM78Q5T7P6 136 aa-0.59□□□□□ -2.5
RC3H1-206ENST00000531594 NDUFA11Q86Y39 141 aa-0.59□□□□□ -2.5
RC3H1-206ENST00000531594 THEM6Q8WUY1 208 aa-0.59□□□□□ -2.5
RC3H1-206ENST00000531594 BOLA2Q9H3K6 86 aa-0.59□□□□□ -2.5
RC3H1-206ENST00000531594 NPVFQ9HCQ7 196 aa-0.59□□□□□ -2.5
RC3H1-206ENST00000531594 ERG28Q9UKR5 140 aa-0.59□□□□□ -2.5
RC3H1-206ENST00000531594 NOP16Q9Y3C1 178 aaKnown RBP-0.59□□□□□ -2.5
RC3H1-206ENST00000531594 CAMSAP1Q5T5Y3 1602 aa-0.6□□□□□ -2.5
RC3H1-206ENST00000531594 HIVEP1P15822 2718 aa-0.6□□□□□ -2.51
RC3H1-206ENST00000531594 FXYD6-FXYD2A0A087WZ82 144 aa-0.6□□□□□ -2.51
RC3H1-206ENST00000531594 BORCS7-ASMTA0A0B4J1R7 106 aa-0.6□□□□□ -2.51
RC3H1-206ENST00000531594 TRAV2A0A0B4J234 112 aa-0.6□□□□□ -2.51
RC3H1-206ENST00000531594 TRAV12-3A0A0B4J271 114 aa-0.6□□□□□ -2.51
RC3H1-206ENST00000531594 K7EQZ3 153 aa-0.6□□□□□ -2.51
RC3H1-206ENST00000531594 APOC4-APOC2K7ER74 178 aa-0.6□□□□□ -2.51
RC3H1-206ENST00000531594 NPFFO15130 113 aa-0.6□□□□□ -2.51
RC3H1-206ENST00000531594 G0S2P27469 103 aa-0.6□□□□□ -2.51
RC3H1-206ENST00000531594 MRPS15P82914 257 aaKnown RBP-0.6□□□□□ -2.51
RC3H1-206ENST00000531594 SPCS2Q15005 226 aa-0.6□□□□□ -2.51
RC3H1-206ENST00000531594 CCDC115Q96NT0 180 aa-0.6□□□□□ -2.51
RC3H1-206ENST00000531594 NF1P21359 2839 aa-0.6□□□□□ -2.51
RC3H1-206ENST00000531594 DOPEY1Q5JWR5 2465 aa-0.6□□□□□ -2.51
RC3H1-206ENST00000531594 HYDINQ4G0P3 5121 aa-0.6□□□□□ -2.51
RC3H1-206ENST00000531594 CCDC171Q6TFL3 1326 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 SPAG17Q6Q759 2223 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 TRAV1-2A0A0B4J238 106 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 FAM92AA1XBS5 289 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 TMEM238C9JI98 176 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 PIN1P1O15428 100 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 SMIM24O75264 130 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 MT-ND4LP03901 98 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 PAEPP09466 180 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 SPRR2BP35325 72 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 EDDM3BP56851 147 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 HAMPP81172 84 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 TMEM35BQ8NCS4 154 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 PCBD2Q9H0N5 130 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 ATPIF1Q9UII2 106 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 DNAJC15Q9Y5T4 150 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 SPCS1Q9Y6A9 102 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 KIDINS220Q9ULH0 1771 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 F5P12259 2224 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 AKAP6Q13023 2319 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 NINQ8N4C6 2090 aa-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 MAP2P11137 1827 aaKnown RBP-0.61□□□□□ -2.51
RC3H1-206ENST00000531594 MED13LQ71F56 2210 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 BIVM-ERCC5R4GMW8 1640 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 BCE1O60756 84 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 RBP4P02753 201 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 SMIM6P0DI80 62 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 CLLU1Q5K131 121 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 TMEM244Q5VVB8 128 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 TMEM91Q6ZNR0 172 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 MNS1Q8NEH6 495 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 OR9Q1Q8NGQ5 310 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 ATP6V0E2Q8NHE4 81 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 WFDC6Q9BQY6 131 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 SCN3BQ9NY72 215 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 UBR4Q5T4S7 5183 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 MED23Q9ULK4 1368 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 GOLGA3Q08378 1498 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 COL6A3P12111 3177 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 PPRC1Q5VV67 1664 aaKnown RBP-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 ADGBQ8N7X0 1667 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 LAMB1P07942 1786 aa-0.62□□□□□ -2.51
RC3H1-206ENST00000531594 VWFP04275 2813 aa-0.63□□□□□ -2.51
RC3H1-206ENST00000531594 MAP1AP78559 2803 aaPredicted RBP-0.63□□□□□ -2.51
RC3H1-206ENST00000531594 HELZP42694 1942 aaKnown RBP-0.63□□□□□ -2.51
RC3H1-206ENST00000531594 CCDC179H3BU77 68 aa-0.63□□□□□ -2.51
RC3H1-206ENST00000531594 J3QLW9 94 aa-0.63□□□□□ -2.51
RC3H1-206ENST00000531594 HLA-DRB4P13762 266 aa-0.63□□□□□ -2.51
RC3H1-206ENST00000531594 ATP11AUNQ6ZP68 121 aa-0.63□□□□□ -2.51
RC3H1-206ENST00000531594 CDC26Q8NHZ8 85 aa-0.63□□□□□ -2.51
RC3H1-206ENST00000531594 BANF2Q9H503 90 aa-0.63□□□□□ -2.51
RC3H1-206ENST00000531594 HLA-DRB4X5D2U9 266 aa-0.63□□□□□ -2.51
RC3H1-206ENST00000531594 EIF3AQ14152 1382 aaKnown RBP-0.63□□□□□ -2.51
RC3H1-206ENST00000531594 KIAA1109Q2LD37 5005 aa-0.63□□□□□ -2.51
RC3H1-206ENST00000531594 ANKRD31Q8N7Z5 1873 aa-0.63□□□□□ -2.51
RC3H1-206ENST00000531594 ARHGAP31Q2M1Z3 1444 aa-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 NBEAL1Q6ZS30 2694 aa-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 NUP210Q8TEM1 1887 aaPredicted RBP-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 M0R2P5 195 aa-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 DPM2O94777 84 aa-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 S100A3P33764 101 aa-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 GNG10P50151 68 aa-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 TMEM128Q5BJH2 165 aa-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 CFAP126Q5VTH2 177 aa-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 SAMD13Q5VXD3 122 aa-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 RPL7L1Q6DKI1 246 aaKnown RBP-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 SPAG11AQ6PDA7 123 aa-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 OR8I2Q8N0Y5 310 aa-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 NDUFA12Q9UI09 145 aa-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 CHD6Q8TD26 2715 aa-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 PIEZO2Q9H5I5 2752 aa-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 STAB2Q8WWQ8 2551 aa-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 ZMYM4Q5VZL5 1548 aa-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 PKDREJQ9NTG1 2253 aa-0.64□□□□□ -2.51
RC3H1-206ENST00000531594 SYNMO15061 1565 aa-0.65□□□□□ -2.51
RC3H1-206ENST00000531594 PTPRMP28827 1452 aa-0.65□□□□□ -2.51
RC3H1-206ENST00000531594 IBTKQ9P2D0 1353 aaPredicted RBP-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms