RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 DNAH7Q8WXX0 4024 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 SPTBN4Q9H254 2564 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 RYR2Q92736 4967 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 CMYA5Q8N3K9 4069 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 PBRM1Q86U86 1689 aa-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 TEP1Q99973 2627 aaKnown RBP-0.44□□□□□ -2.48
CSDE1-210ENST00000525878 DNAH1Q9P2D7 4330 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 BICRAQ9NZM4 1560 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 TNRC18O15417 2968 aaPredicted RBP-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 ANK3Q12955 4377 aaKnown RBP-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 LAMA1P25391 3075 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 KIF21AQ7Z4S6 1674 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.45□□□□□ -2.482e-6■■■□□ 16.8
CSDE1-210ENST00000525878 LOC107984640A0A0U1RRK4 108 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 LOC107986453A0A1B0GWG9 222 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 TMEM210A6NLX4 147 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 ZNF815PA8K554 130 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 TFF1P04155 84 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 APODP05090 189 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 FABP2P12104 132 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 TPT1P13693 172 aaKnown RBP-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 SPRR2AP35326 72 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 MT4P47944 62 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 GTF2A1P52655 376 aaPredicted RBP-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 NPC2P61916 151 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 BLCAPP62952 87 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 GNG3P63215 75 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 INSL4Q14641 139 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 IQCJQ1A5X6 159 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 AKR1C8PQ5T2L2 129 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 FAM74A4Q5TZK3 123 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 SMIM20Q8N5G0 67 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 OTOSQ8NHW6 89 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 NEK7Q8TDX7 302 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 DGCR14Q96DF8 476 aaKnown RBP-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 TMEM242Q9NWH2 141 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 COA4Q9NYJ1 87 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 SSR3Q9UNL2 185 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 ARL2BPQ9Y2Y0 163 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 NDUFAF1Q9Y375 327 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 NUBP2Q9Y5Y2 271 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 ZMYM4Q5VZL5 1548 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 A0A0C4DFX4 3053 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 ADGRB1O14514 1584 aa-0.45□□□□□ -2.48
CSDE1-210ENST00000525878 C10orf71Q711Q0 1435 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 UHRF1BP1LA0JNW5 1464 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 A2MP01023 1474 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 RELNP78509 3460 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 PAPPA2Q9BXP8 1791 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 TRGV1A0A0A0MS02 117 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 CLPSL1A2RUU4 121 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 RBAKDNA6NC62 111 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 TMEM14DPA8MWL7 114 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 C5orf58C9J3I9 102 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 ZNF670-ZNF695F2Z2N8 137 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 I3L2K1 104 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 IFNA1P01562 189 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 HBDP02042 147 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 COX4I1P13073 169 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 ACYP2P14621 99 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 SPRR2EP22531 72 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 CRYGSP22914 178 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 HSD11B1P28845 292 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 SDC4P31431 198 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 S100A11P31949 105 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 SDC2P34741 201 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 POLR2JP52435 117 aaKnown RBP-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 TAS2R41P59536 307 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 FADDQ13158 208 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 SPA17Q15506 151 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 HRCT1Q6UXD1 115 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 LINC00305Q7Z4B0 112 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 TEX29Q8N6K0 151 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 OR13C6PQ8NH95 151 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 PPDPFLQ8WWR9 84 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 AP3S1Q92572 193 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 PPP1R14BQ96C90 147 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 SMIM7Q9BQ49 75 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 PBDC1Q9BVG4 233 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 CBLN4Q9NTU7 201 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 CCDC171Q6TFL3 1326 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 SONP18583 2426 aaKnown RBP-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 SHROOM2Q13796 1616 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 MED23Q9ULK4 1368 aa-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 FASNP49327 2511 aaKnown RBP-0.46□□□□□ -2.48
CSDE1-210ENST00000525878 FMN2Q9NZ56 1722 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 PRRC2CQ9Y520 2896 aaKnown RBP-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 IQSEC2Q5JU85 1478 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 TRBV7-1A0A0A6YYK4 115 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 TRAV2A0A0B4J234 112 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 TRAV13-1A0A0B4J241 112 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 IGHV1-24A0A0C4DH33 117 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 TRBV10-3A0A0K0K1G6 114 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 PGRMC1O00264 195 aaKnown RBP-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 SPINK8P0C7L1 97 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 GCHFRP30047 84 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 RPL22P35268 128 aaKnown RBP-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 PPP1R2P41236 205 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 SRP9P49458 86 aaKnown RBP-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms