RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 PRRC2AP48634 2157 aaKnown RBP4.33□□□□□ -1.72
NUDCD1-204ENST00000521439 SNRNP200O75643 2136 aaKnown RBP4.33□□□□□ -1.72
NUDCD1-204ENST00000521439 MUC22E2RYF6 1773 aaPredicted RBP4.33□□□□□ -1.72
NUDCD1-204ENST00000521439 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.33□□□□□ -1.72
NUDCD1-204ENST00000521439 K7ERJ3 54 aa4.33□□□□□ -1.72
NUDCD1-204ENST00000521439 PSPHP1O15172 72 aa4.33□□□□□ -1.72
NUDCD1-204ENST00000521439 TRBV12-3P01733 135 aa4.33□□□□□ -1.72
NUDCD1-204ENST00000521439 S100A4P26447 101 aaKnown RBP4.33□□□□□ -1.72
NUDCD1-204ENST00000521439 RPL30P62888 115 aaKnown RBP4.33□□□□□ -1.72
NUDCD1-204ENST00000521439 PRR3P79522 188 aaKnown RBP4.33□□□□□ -1.72
NUDCD1-204ENST00000521439 KISS1Q15726 138 aa4.33□□□□□ -1.72
NUDCD1-204ENST00000521439 SPTSSAQ969W0 71 aa4.33□□□□□ -1.72
NUDCD1-204ENST00000521439 NHP2Q9NX24 153 aaKnown RBP4.33□□□□□ -1.72
NUDCD1-204ENST00000521439 LINC00588Q9Y4M8 146 aa4.33□□□□□ -1.72
NUDCD1-204ENST00000521439 FREM3P0C091 2139 aa4.33□□□□□ -1.72
NUDCD1-204ENST00000521439 TRBV6-6A0A0A6YYG2 114 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 IGKV1-9A0A0C4DH69 117 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 NDUFC1O43677 76 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 NPYP01303 97 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 SPTBP11277 2137 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 NPPCP23582 126 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 CKS2P33552 79 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 EFNA4P52798 201 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 C6orf99Q4VX62 202 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 FAM104BQ5XKR9 115 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 ZFP2Q6ZN57 461 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 LINC00337Q8N6G1 96 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 C11orf72Q8NBR9 251 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 NPBQ8NG41 125 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 RNF185Q96GF1 192 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 OSTCQ9NRP0 149 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 XCL2Q9UBD3 114 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 TP73-AS1Q9UF72 201 aa4.32□□□□□ -1.72
NUDCD1-204ENST00000521439 IGKV1D-43A0A0B4J1Z2 117 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 A6NDX4 124 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 C11orf94C9JXX5 98 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 LEPROTL1O95214 131 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 FSTL3O95633 263 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 PPYP01298 95 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 LINC00313P59037 77 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 SS18Q15532 418 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 FBXL19-AS1Q494R0 122 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 C7orf65Q6ZTY9 151 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 MARCH3Q86UD3 253 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 Q8N2B8 174 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 Q8N8P6 123 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 Q8N9W7 124 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 SLC25A2Q9BXI2 301 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 DYNLRB1Q9NP97 96 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 ZNF492Q9P255 531 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 LHFPL6Q9Y693 200 aa4.31□□□□□ -1.72
NUDCD1-204ENST00000521439 CACNA1CQ13936 2221 aa4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 IGHV3OR15-7A0A075B7D8 119 aa4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 MYMXA0A1B0GTQ4 84 aa4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 TCRBV4S1A1TA0A5B7 111 aa4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 H3BMM0 161 aa4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 SLC25A20O43772 301 aa4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 INAFM2P0DMQ5 153 aa4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 RNASE2P10153 161 aaKnown RBP4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 RPS27P42677 84 aaKnown RBP4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 UBE2AP49459 152 aa4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 FXYD2P54710 66 aa4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 DEFB121Q5J5C9 76 aa4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 GUSBP11Q6P575 273 aa4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 PDPNQ86YL7 162 aa4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 FAM19A2Q8N3H0 131 aa4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 UBE2WQ96B02 151 aa4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 ZNF714Q96N38 554 aa4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 SHANK1Q9Y566 2161 aa4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 ATG2BQ96BY7 2078 aa4.3□□□□□ -1.72
NUDCD1-204ENST00000521439 A0A0J9YXV3 536 aa4.29□□□□□ -1.72
NUDCD1-204ENST00000521439 SMIM27A0A1W2PRY6 76 aa4.29□□□□□ -1.72
NUDCD1-204ENST00000521439 COX7A2P2O60397 106 aa4.29□□□□□ -1.72
NUDCD1-204ENST00000521439 BCE1O60756 84 aa4.29□□□□□ -1.72
NUDCD1-204ENST00000521439 IGKV1D-33P01593 117 aa4.29□□□□□ -1.72
NUDCD1-204ENST00000521439 IGKV1-33P01594 117 aa4.29□□□□□ -1.72
NUDCD1-204ENST00000521439 IGKV1-5P01602 117 aa4.29□□□□□ -1.72
NUDCD1-204ENST00000521439 CCKP06307 115 aa4.29□□□□□ -1.72
NUDCD1-204ENST00000521439 UBE2D3P61077 147 aa4.29□□□□□ -1.72
NUDCD1-204ENST00000521439 UBE2D2P62837 147 aa4.29□□□□□ -1.72
NUDCD1-204ENST00000521439 CIRBPQ14011 172 aaKnown RBP4.29□□□□□ -1.72
NUDCD1-204ENST00000521439 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
NUDCD1-204ENST00000521439 PRNTQ86SH4 94 aa4.29□□□□□ -1.72
NUDCD1-204ENST00000521439 SLC25A29Q8N8R3 303 aa4.29□□□□□ -1.72
NUDCD1-204ENST00000521439 PSENENQ9NZ42 101 aa4.29□□□□□ -1.72
NUDCD1-204ENST00000521439 V9GYV3 84 aa4.29□□□□□ -1.72
NUDCD1-204ENST00000521439 EXPH5Q8NEV8 1989 aa4.29□□□□□ -1.72
NUDCD1-204ENST00000521439 ARHGAP21Q5T5U3 1957 aa4.28□□□□□ -1.72
NUDCD1-204ENST00000521439 IGHV6-1A0A0B4J1U7 121 aa4.28□□□□□ -1.72
NUDCD1-204ENST00000521439 IGHV1-69DA0A0B4J2H0 117 aa4.28□□□□□ -1.72
NUDCD1-204ENST00000521439 IBA57-AS1B1ANH7 110 aa4.28□□□□□ -1.72
NUDCD1-204ENST00000521439 H3BVH4 76 aa4.28□□□□□ -1.72
NUDCD1-204ENST00000521439 CLPSP04118 112 aa4.28□□□□□ -1.72
NUDCD1-204ENST00000521439 CISD3P0C7P0 127 aa4.28□□□□□ -1.72
NUDCD1-204ENST00000521439 SLC25A16P16260 332 aa4.28□□□□□ -1.72
NUDCD1-204ENST00000521439 FUSP35637 526 aaKnown RBP eCLIP4.28□□□□□ -1.72
NUDCD1-204ENST00000521439 DEFB134Q4QY38 66 aa4.28□□□□□ -1.72
NUDCD1-204ENST00000521439 CEMP1Q6PRD7 247 aaPredicted RBP4.28□□□□□ -1.72
NUDCD1-204ENST00000521439 MDP1Q86V88 176 aa4.28□□□□□ -1.72
NUDCD1-204ENST00000521439 IFI27L1Q96BM0 104 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms