RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 ERP29P30040 261 aaKnown RBP-3.23□□□□□ -2.93
SCARNA23-201ENST00000516060 RPL35P42766 123 aaKnown RBP-3.23□□□□□ -2.93
SCARNA23-201ENST00000516060 MED21Q13503 144 aa-3.23□□□□□ -2.93
SCARNA23-201ENST00000516060 C9orf84Q5VXU9 1444 aa-3.23□□□□□ -2.93
SCARNA23-201ENST00000516060 MAFIPQ8WZ33 124 aa-3.23□□□□□ -2.93
SCARNA23-201ENST00000516060 MCEEQ96PE7 176 aa-3.23□□□□□ -2.93
SCARNA23-201ENST00000516060 PARVBQ9HBI1 364 aa-3.23□□□□□ -2.93
SCARNA23-201ENST00000516060 MYO9AB2RTY4 2548 aa-3.23□□□□□ -2.93
SCARNA23-201ENST00000516060 GAPVD1Q14C86 1478 aa-3.23□□□□□ -2.93
SCARNA23-201ENST00000516060 RANBP2P49792 3224 aaKnown RBP-3.23□□□□□ -2.93
SCARNA23-201ENST00000516060 KIF13AQ9H1H9 1805 aa-3.23□□□□□ -2.93
SCARNA23-201ENST00000516060 CEP290O15078 2479 aa-3.24□□□□□ -2.93
SCARNA23-201ENST00000516060 J3KT08 172 aa-3.24□□□□□ -2.93
SCARNA23-201ENST00000516060 TRGC2P03986 189 aa-3.24□□□□□ -2.93
SCARNA23-201ENST00000516060 ADCYAP1P18509 176 aa-3.24□□□□□ -2.93
SCARNA23-201ENST00000516060 C3orf33Q6P1S2 294 aa-3.24□□□□□ -2.93
SCARNA23-201ENST00000516060 VPS25Q9BRG1 176 aa-3.24□□□□□ -2.93
SCARNA23-201ENST00000516060 FKBP11Q9NYL4 201 aa-3.24□□□□□ -2.93
SCARNA23-201ENST00000516060 LRBAP50851 2863 aa-3.25□□□□□ -2.93
SCARNA23-201ENST00000516060 H0YGG7 62 aa-3.25□□□□□ -2.93
SCARNA23-201ENST00000516060 PDE6DO43924 150 aa-3.25□□□□□ -2.93
SCARNA23-201ENST00000516060 NDUFS6O75380 124 aaKnown RBP-3.25□□□□□ -2.93
SCARNA23-201ENST00000516060 NPC2P61916 151 aa-3.25□□□□□ -2.93
SCARNA23-201ENST00000516060 PPDPFLQ8WWR9 84 aa-3.25□□□□□ -2.93
SCARNA23-201ENST00000516060 LXNQ9BS40 222 aa-3.25□□□□□ -2.93
SCARNA23-201ENST00000516060 ZFHX3Q15911 3703 aa-3.25□□□□□ -2.93
SCARNA23-201ENST00000516060 WDR97A6NE52 1622 aa-3.26□□□□□ -2.93
SCARNA23-201ENST00000516060 CD109Q6YHK3 1445 aa-3.26□□□□□ -2.93
SCARNA23-201ENST00000516060 SNAPC4Q5SXM2 1469 aa-3.26□□□□□ -2.93
SCARNA23-201ENST00000516060 HIST1H1EP10412 219 aaKnown RBP-3.26□□□□□ -2.93
SCARNA23-201ENST00000516060 TPT1P13693 172 aaKnown RBP-3.26□□□□□ -2.93
SCARNA23-201ENST00000516060 EDDM3BP56851 147 aa-3.26□□□□□ -2.93
SCARNA23-201ENST00000516060 IFI27L1Q96BM0 104 aa-3.26□□□□□ -2.93
SCARNA23-201ENST00000516060 IMP3Q9NV31 184 aaKnown RBP-3.26□□□□□ -2.93
SCARNA23-201ENST00000516060 DYNC2H1Q8NCM8 4307 aaKnown RBP-3.26□□□□□ -2.93
SCARNA23-201ENST00000516060 SLIT1O75093 1534 aa-3.27□□□□□ -2.93
SCARNA23-201ENST00000516060 LOC107986453A0A1B0GWG9 222 aa-3.27□□□□□ -2.93
SCARNA23-201ENST00000516060 SERPINA6P08185 405 aa-3.27□□□□□ -2.93
SCARNA23-201ENST00000516060 ARF6P62330 175 aa-3.27□□□□□ -2.93
SCARNA23-201ENST00000516060 C7orf50Q9BRJ6 194 aaKnown RBP-3.27□□□□□ -2.93
SCARNA23-201ENST00000516060 APLNQ9ULZ1 77 aa-3.27□□□□□ -2.93
SCARNA23-201ENST00000516060 CAMSAP2Q08AD1 1489 aa-3.28□□□□□ -2.93
SCARNA23-201ENST00000516060 MYH1P12882 1939 aa-3.28□□□□□ -2.93
SCARNA23-201ENST00000516060 SPENQ96T58 3664 aaKnown RBP-3.28□□□□□ -2.93
SCARNA23-201ENST00000516060 A0A087WUJ7 227 aa-3.28□□□□□ -2.93
SCARNA23-201ENST00000516060 IFNA14P01570 189 aa-3.28□□□□□ -2.93
SCARNA23-201ENST00000516060 OCM2P0CE71 109 aa-3.28□□□□□ -2.93
SCARNA23-201ENST00000516060 GPX7Q96SL4 187 aaPredicted RBP-3.28□□□□□ -2.93
SCARNA23-201ENST00000516060 SIGMAR1Q99720 223 aa-3.28□□□□□ -2.93
SCARNA23-201ENST00000516060 LOC100506127A0A0U1RQW1 187 aa-3.29□□□□□ -2.94
SCARNA23-201ENST00000516060 BANF1O75531 89 aa-3.29□□□□□ -2.94
SCARNA23-201ENST00000516060 IFNA6P05013 189 aa-3.29□□□□□ -2.94
SCARNA23-201ENST00000516060 MAXP61244 160 aa-3.29□□□□□ -2.94
SCARNA23-201ENST00000516060 KRTAP19-5Q3LI72 72 aa-3.29□□□□□ -2.94
SCARNA23-201ENST00000516060 H1FX-AS1Q4G0G2 97 aa-3.29□□□□□ -2.94
SCARNA23-201ENST00000516060 NDUFA11Q86Y39 141 aa-3.29□□□□□ -2.94
SCARNA23-201ENST00000516060 AP3S1Q92572 193 aa-3.29□□□□□ -2.94
SCARNA23-201ENST00000516060 OR2J1Q9GZK6 312 aa-3.29□□□□□ -2.94
SCARNA23-201ENST00000516060 FER1L6Q2WGJ9 1857 aa-3.29□□□□□ -2.94
SCARNA23-201ENST00000516060 DMXL2Q8TDJ6 3036 aa-3.29□□□□□ -2.94
SCARNA23-201ENST00000516060 DLC1Q96QB1 1528 aa-3.29□□□□□ -2.94
SCARNA23-201ENST00000516060 CLDN24A6NM45 220 aa-3.3□□□□□ -2.94
SCARNA23-201ENST00000516060 TRPC5OSA6NMA1 111 aa-3.3□□□□□ -2.94
SCARNA23-201ENST00000516060 H0YJX3 145 aa-3.3□□□□□ -2.94
SCARNA23-201ENST00000516060 DEFB1P60022 68 aa-3.3□□□□□ -2.94
SCARNA23-201ENST00000516060 KRTAP20-1Q3LI63 56 aa-3.3□□□□□ -2.94
SCARNA23-201ENST00000516060 TEX29Q8N6K0 151 aa-3.3□□□□□ -2.94
SCARNA23-201ENST00000516060 CLDN22Q8N7P3 220 aa-3.3□□□□□ -2.94
SCARNA23-201ENST00000516060 BRK1Q8WUW1 75 aa-3.3□□□□□ -2.94
SCARNA23-201ENST00000516060 FAM135BQ49AJ0 1406 aa-3.3□□□□□ -2.94
SCARNA23-201ENST00000516060 PTPRMP28827 1452 aa-3.3□□□□□ -2.94
SCARNA23-201ENST00000516060 KPNA4O00629 521 aaPredicted RBP-3.31□□□□□ -2.94
SCARNA23-201ENST00000516060 CALB1P05937 261 aa-3.31□□□□□ -2.94
SCARNA23-201ENST00000516060 BAGE3Q86Y29 109 aa-3.31□□□□□ -2.94
SCARNA23-201ENST00000516060 LRRC37A2A6NM11 1700 aa-3.31□□□□□ -2.94
SCARNA23-201ENST00000516060 SLC25A4P12235 298 aa-3.32□□□□□ -2.94
SCARNA23-201ENST00000516060 AGPAT3Q9NRZ7 376 aa-3.32□□□□□ -2.94
SCARNA23-201ENST00000516060 TCOF1Q13428 1488 aaKnown RBP-3.33□□□□□ -2.94
SCARNA23-201ENST00000516060 IBTKQ9P2D0 1353 aaPredicted RBP-3.33□□□□□ -2.94
SCARNA23-201ENST00000516060 IGHV1-24A0A0C4DH33 117 aa-3.33□□□□□ -2.94
SCARNA23-201ENST00000516060 IFNGP01579 166 aa-3.33□□□□□ -2.94
SCARNA23-201ENST00000516060 TMEM91Q6ZNR0 172 aa-3.33□□□□□ -2.94
SCARNA23-201ENST00000516060 OR5H6Q8NGV6 325 aa-3.33□□□□□ -2.94
SCARNA23-201ENST00000516060 NEK7Q8TDX7 302 aa-3.33□□□□□ -2.94
SCARNA23-201ENST00000516060 PTH2Q96A98 100 aa-3.33□□□□□ -2.94
SCARNA23-201ENST00000516060 CHMP5Q9NZZ3 219 aa-3.33□□□□□ -2.94
SCARNA23-201ENST00000516060 SPTBN5Q9NRC6 3674 aaKnown RBP-3.33□□□□□ -2.94
SCARNA23-201ENST00000516060 SLC25A6P12236 298 aa-3.34□□□□□ -2.94
SCARNA23-201ENST00000516060 SKP1P63208 163 aa-3.34□□□□□ -2.94
SCARNA23-201ENST00000516060 BASP1P80723 227 aaKnown RBP-3.34□□□□□ -2.94
SCARNA23-201ENST00000516060 MORN4Q8NDC4 146 aa-3.34□□□□□ -2.94
SCARNA23-201ENST00000516060 PRELID3AQ96N28 172 aa-3.34□□□□□ -2.94
SCARNA23-201ENST00000516060 IL20Q9NYY1 176 aa-3.34□□□□□ -2.94
SCARNA23-201ENST00000516060 NDUFAF1Q9Y375 327 aa-3.34□□□□□ -2.94
SCARNA23-201ENST00000516060 PRELID3BQ9Y3B1 194 aa-3.34□□□□□ -2.94
SCARNA23-201ENST00000516060 KIAA0556O60303 1618 aa-3.34□□□□□ -2.94
SCARNA23-201ENST00000516060 BPTFQ12830 3046 aa-3.35□□□□□ -2.95
SCARNA23-201ENST00000516060 COL14A1Q05707 1796 aaKnown RBP-3.35□□□□□ -2.95
SCARNA23-201ENST00000516060 SYS1-DBNDD2H3BUS1 97 aa-3.35□□□□□ -2.95
SCARNA23-201ENST00000516060 OGNP20774 298 aaKnown RBP-3.35□□□□□ -2.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms