RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 MYH8P13535 1937 aa0.3□□□□□ -2.36
HMGCS1-207ENST00000514610 OVOS2A0A0J9YW53 1432 aa0.3□□□□□ -2.36
HMGCS1-207ENST00000514610 OVOS2Q6IE36 1432 aa0.3□□□□□ -2.36
HMGCS1-207ENST00000514610 FAM236AA0A1B0GUQ0 79 aa0.3□□□□□ -2.36
HMGCS1-207ENST00000514610 FAM236BA0A1B0GV22 79 aa0.3□□□□□ -2.36
HMGCS1-207ENST00000514610 F2Z2F3 143 aa0.3□□□□□ -2.36
HMGCS1-207ENST00000514610 M0R2P5 195 aa0.3□□□□□ -2.36
HMGCS1-207ENST00000514610 CKS1BP61024 79 aa0.3□□□□□ -2.36
HMGCS1-207ENST00000514610 NPC2P61916 151 aa0.3□□□□□ -2.36
HMGCS1-207ENST00000514610 EMX2Q04743 252 aa0.3□□□□□ -2.36
HMGCS1-207ENST00000514610 PPP1R1CQ8WVI7 109 aa0.3□□□□□ -2.36
HMGCS1-207ENST00000514610 PROK2Q9HC23 129 aa0.3□□□□□ -2.36
HMGCS1-207ENST00000514610 ANK2Q01484 3957 aa0.3□□□□□ -2.36
HMGCS1-207ENST00000514610 AHCTF1Q8WYP5 2266 aa0.29□□□□□ -2.36
HMGCS1-207ENST00000514610 LAMC3Q9Y6N6 1575 aa0.29□□□□□ -2.36
HMGCS1-207ENST00000514610 LZICQ8WZA0 190 aa0.29□□□□□ -2.36
HMGCS1-207ENST00000514610 NCOR2Q9Y618 2525 aa0.29□□□□□ -2.36
HMGCS1-207ENST00000514610 ASXL3Q9C0F0 2248 aa0.28□□□□□ -2.36
HMGCS1-207ENST00000514610 TRBV20-1A0A075B6N2 111 aa0.28□□□□□ -2.36
HMGCS1-207ENST00000514610 VMO1Q7Z5L0 202 aa0.28□□□□□ -2.36
HMGCS1-207ENST00000514610 MMGT1Q8N4V1 131 aa0.28□□□□□ -2.36
HMGCS1-207ENST00000514610 PRR15LQ9BU68 103 aa0.28□□□□□ -2.36
HMGCS1-207ENST00000514610 BATF3Q9NR55 127 aa0.28□□□□□ -2.36
HMGCS1-207ENST00000514610 ERG28Q9UKR5 140 aa0.28□□□□□ -2.36
HMGCS1-207ENST00000514610 OTOGQ6ZRI0 2925 aa0.28□□□□□ -2.36
HMGCS1-207ENST00000514610 MYH9P35579 1960 aaKnown RBP0.28□□□□□ -2.36
HMGCS1-207ENST00000514610 A0A087WTM6 91 aa0.27□□□□□ -2.37
HMGCS1-207ENST00000514610 IGLC6P0CF74 106 aa0.27□□□□□ -2.37
HMGCS1-207ENST00000514610 LINC01545Q5VT33 79 aa0.27□□□□□ -2.37
HMGCS1-207ENST00000514610 MIC13Q5XKP0 118 aa0.27□□□□□ -2.37
HMGCS1-207ENST00000514610 NDUFA11Q86Y39 141 aa0.27□□□□□ -2.37
HMGCS1-207ENST00000514610 SIPA1L3O60292 1781 aaPredicted RBP0.27□□□□□ -2.37
HMGCS1-207ENST00000514610 CELSR2Q9HCU4 2923 aa0.26□□□□□ -2.37
HMGCS1-207ENST00000514610 TRAV12-3A0A0B4J271 114 aa0.26□□□□□ -2.37
HMGCS1-207ENST00000514610 RBAKDNA6NC62 111 aa0.26□□□□□ -2.37
HMGCS1-207ENST00000514610 MCRIP1C9JLW8 97 aa0.26□□□□□ -2.37
HMGCS1-207ENST00000514610 CCDC179H3BU77 68 aa0.26□□□□□ -2.37
HMGCS1-207ENST00000514610 CCL3L1P16619 93 aa0.26□□□□□ -2.37
HMGCS1-207ENST00000514610 C20orf197Q8N268 126 aa0.26□□□□□ -2.37
HMGCS1-207ENST00000514610 BPESC1Q9GZL8 116 aa0.26□□□□□ -2.37
HMGCS1-207ENST00000514610 NDUFA12Q9UI09 145 aa0.26□□□□□ -2.37
HMGCS1-207ENST00000514610 SOGA1O94964 1423 aa0.26□□□□□ -2.37
HMGCS1-207ENST00000514610 CDK13Q14004 1512 aaKnown RBP0.26□□□□□ -2.37
HMGCS1-207ENST00000514610 UNC13BO14795 1591 aa0.26□□□□□ -2.37
HMGCS1-207ENST00000514610 SYNE1Q8NF91 8797 aaKnown RBP0.25□□□□□ -2.37
HMGCS1-207ENST00000514610 SSC5DA1L4H1 1573 aa0.25□□□□□ -2.37
HMGCS1-207ENST00000514610 DISP2A7MBM2 1401 aa0.25□□□□□ -2.37
HMGCS1-207ENST00000514610 PRG4Q92954 1404 aaPredicted RBP0.25□□□□□ -2.37
HMGCS1-207ENST00000514610 LINC00694P0DN24 101 aa0.25□□□□□ -2.37
HMGCS1-207ENST00000514610 COX4I1P13073 169 aa0.25□□□□□ -2.37
HMGCS1-207ENST00000514610 SPCS2Q15005 226 aa0.25□□□□□ -2.37
HMGCS1-207ENST00000514610 C4orf33Q8N1A6 199 aa0.25□□□□□ -2.37
HMGCS1-207ENST00000514610 VSTM2AQ8TAG5 236 aa0.25□□□□□ -2.37
HMGCS1-207ENST00000514610 UBR5O95071 2799 aaPredicted RBP0.24□□□□□ -2.37
HMGCS1-207ENST00000514610 ADGRB1O14514 1584 aa0.24□□□□□ -2.37
HMGCS1-207ENST00000514610 CTAGE3PQ8IX95 158 aa0.24□□□□□ -2.37
HMGCS1-207ENST00000514610 FHAD1B1AJZ9 1412 aa0.23□□□□□ -2.37
HMGCS1-207ENST00000514610 GVQW2A0A096LPI5 108 aaPredicted RBP0.23□□□□□ -2.37
HMGCS1-207ENST00000514610 M0R2Z0 102 aa0.23□□□□□ -2.37
HMGCS1-207ENST00000514610 TSTD1Q8NFU3 115 aa0.23□□□□□ -2.37
HMGCS1-207ENST00000514610 COX7B2Q8TF08 81 aa0.23□□□□□ -2.37
HMGCS1-207ENST00000514610 CHD9Q3L8U1 2897 aa0.23□□□□□ -2.37
HMGCS1-207ENST00000514610 NWD2Q9ULI1 1742 aa0.22□□□□□ -2.37
HMGCS1-207ENST00000514610 J3QR89 54 aa0.22□□□□□ -2.37
HMGCS1-207ENST00000514610 K7ERU9 68 aa0.22□□□□□ -2.37
HMGCS1-207ENST00000514610 PIRTP0C851 137 aa0.22□□□□□ -2.37
HMGCS1-207ENST00000514610 SSBP1Q04837 148 aaKnown RBP0.22□□□□□ -2.37
HMGCS1-207ENST00000514610 SPANXN1Q5VSR9 72 aa0.22□□□□□ -2.37
HMGCS1-207ENST00000514610 SLC48A1Q6P1K1 146 aa0.22□□□□□ -2.37
HMGCS1-207ENST00000514610 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.22□□□□□ -2.37
HMGCS1-207ENST00000514610 SMIM11BQ8TCY0 68 aa0.22□□□□□ -2.37
HMGCS1-207ENST00000514610 SAR1AQ9NR31 198 aa0.22□□□□□ -2.37
HMGCS1-207ENST00000514610 UNC79Q9P2D8 2635 aa0.22□□□□□ -2.37
HMGCS1-207ENST00000514610 HRNRQ86YZ3 2850 aaPredicted RBP0.22□□□□□ -2.37
HMGCS1-207ENST00000514610 LRP1Q07954 4544 aaKnown RBP0.21□□□□□ -2.38
HMGCS1-207ENST00000514610 TRBV7-1A0A0A6YYK4 115 aa0.21□□□□□ -2.38
HMGCS1-207ENST00000514610 TSPAN19P0C672 248 aa0.21□□□□□ -2.38
HMGCS1-207ENST00000514610 FAM74A4Q5TZK3 123 aa0.21□□□□□ -2.38
HMGCS1-207ENST00000514610 Q6ZUT4 128 aa0.21□□□□□ -2.38
HMGCS1-207ENST00000514610 CACNA1CQ13936 2221 aa0.2□□□□□ -2.38
HMGCS1-207ENST00000514610 LOC105371267A0A1B0GV96 52 aa0.2□□□□□ -2.38
HMGCS1-207ENST00000514610 ALX1Q15699 326 aa0.2□□□□□ -2.38
HMGCS1-207ENST00000514610 SMIM21Q3B7S5 101 aa0.2□□□□□ -2.38
HMGCS1-207ENST00000514610 C10orf82Q8WW14 230 aa0.2□□□□□ -2.38
HMGCS1-207ENST00000514610 MAFIPQ8WZ33 124 aa0.2□□□□□ -2.38
HMGCS1-207ENST00000514610 Q96NJ1 140 aa0.2□□□□□ -2.38
HMGCS1-207ENST00000514610 TMEM242Q9NWH2 141 aa0.2□□□□□ -2.38
HMGCS1-207ENST00000514610 COPZ2Q9P299 210 aa0.2□□□□□ -2.38
HMGCS1-207ENST00000514610 MYH7P12883 1935 aa0.2□□□□□ -2.38
HMGCS1-207ENST00000514610 CELSR1Q9NYQ6 3014 aa0.19□□□□□ -2.38
HMGCS1-207ENST00000514610 PITX3O75364 302 aa0.19□□□□□ -2.38
HMGCS1-207ENST00000514610 NCR2O95944 276 aa0.19□□□□□ -2.38
HMGCS1-207ENST00000514610 APODP05090 189 aa0.19□□□□□ -2.38
HMGCS1-207ENST00000514610 NMBP08949 121 aa0.19□□□□□ -2.38
HMGCS1-207ENST00000514610 ACYP2P14621 99 aa0.19□□□□□ -2.38
HMGCS1-207ENST00000514610 RPL7L1Q6DKI1 246 aaKnown RBP0.19□□□□□ -2.38
HMGCS1-207ENST00000514610 ANP32BQ92688 251 aaKnown RBP0.19□□□□□ -2.38
HMGCS1-207ENST00000514610 PSMG3Q9BT73 122 aaPredicted RBP0.19□□□□□ -2.38
HMGCS1-207ENST00000514610 V9GYV3 84 aa0.19□□□□□ -2.38
HMGCS1-207ENST00000514610 TPT1P8Q9HAU6 139 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms