RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 SIX6O95475 246 aa1.16□□□□□ -2.22
DEPDC1B-204ENST00000509006 IGKCP01834 107 aa1.16□□□□□ -2.22
DEPDC1B-204ENST00000509006 ASIPP42127 132 aa1.16□□□□□ -2.22
DEPDC1B-204ENST00000509006 RBM3P98179 157 aaKnown RBP1.16□□□□□ -2.22
DEPDC1B-204ENST00000509006 FAM74A4Q5TZK3 123 aa1.16□□□□□ -2.22
DEPDC1B-204ENST00000509006 GDF5OSQ5U4N7 250 aa1.16□□□□□ -2.22
DEPDC1B-204ENST00000509006 BRD3OSQ6XYD6 125 aa1.16□□□□□ -2.22
DEPDC1B-204ENST00000509006 SPTSSBQ8NFR3 76 aa1.16□□□□□ -2.22
DEPDC1B-204ENST00000509006 DSCR8Q96T75 97 aa1.16□□□□□ -2.22
DEPDC1B-204ENST00000509006 MGST2Q99735 147 aa1.16□□□□□ -2.22
DEPDC1B-204ENST00000509006 CYSTM1Q9H1C7 97 aa1.16□□□□□ -2.22
DEPDC1B-204ENST00000509006 DPH3P1Q9H4G8 78 aa1.16□□□□□ -2.22
DEPDC1B-204ENST00000509006 CITO14578 2027 aa1.16□□□□□ -2.22
DEPDC1B-204ENST00000509006 MPDZO75970 2070 aa1.16□□□□□ -2.22
DEPDC1B-204ENST00000509006 ZFHX2Q9C0A1 2572 aaPredicted RBP1.15□□□□□ -2.22
DEPDC1B-204ENST00000509006 BCORL1Q5H9F3 1711 aa1.15□□□□□ -2.22
DEPDC1B-204ENST00000509006 IGKV2-40A0A087WW87 121 aaPredicted RBP1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 LOC110117498A0A087WWA1 95 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 TRBV7-1A0A0A6YYK4 115 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 IGKV3D-7A0A0C4DH55 119 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 IGKV3OR2-268A0A0C4DH90 116 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 NDUFC1O43677 76 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 IGKV2D-40P01614 121 aaPredicted RBP1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 GYPAP02724 150 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 SNCAP37840 140 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 SSBP1Q04837 148 aaKnown RBP1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 INSL4Q14641 139 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 CSAG1Q6PB30 78 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 BET1LQ9NYM9 111 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 UQCR10Q9UDW1 63 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 ADGRL2O95490 1459 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 CCDC18Q5T9S5 1454 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 RAPGEF2Q9Y4G8 1499 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 COL4A5P29400 1685 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 RBBP6Q7Z6E9 1792 aaKnown RBP1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 ANK1P16157 1881 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 KIAA1549Q9HCM3 1950 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 SPHKAPQ2M3C7 1700 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 LRP5O75197 1615 aa1.15□□□□□ -2.23
DEPDC1B-204ENST00000509006 MAGI1Q96QZ7 1491 aaPredicted RBP1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 CDK12Q9NYV4 1490 aaPredicted RBP1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 BRWD1Q9NSI6 2320 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 DIDO1Q9BTC0 2240 aaKnown RBP1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 IGKV3-7A0A075B6H7 116 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 TRBV6-7A0A0A0MS04 114 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 LOC285095A0A1B0GVY8 99 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 RBAKDNA6NC62 111 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 ATOX1O00244 68 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 GNGT2O14610 69 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 MPC2O95563 127 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 ELOF1P60002 83 aaKnown RBP1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 GNG11P61952 73 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 MED12LQ86YW9 2145 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 IFI27L1Q96BM0 104 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 ODF3Q96PU9 254 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 PTPRFP10586 1907 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 ALPK3Q96L96 1907 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 RP1P56715 2156 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 SHANK1Q9Y566 2161 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 ADGRB3O60242 1522 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 SCAPERQ9BY12 1400 aa1.14□□□□□ -2.23
DEPDC1B-204ENST00000509006 LAMB1P07942 1786 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 ADGRB2O60241 1585 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 LTBP2Q14767 1821 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 SDK2Q58EX2 2172 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 NWD2Q9ULI1 1742 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 MDC1Q14676 2089 aaKnown RBP1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 NINQ8N4C6 2090 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 HCG22E2RYF7 251 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 IGLV3-1P01715 115 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 COX6CP09669 75 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 PRB4P10163 310 aaPredicted RBP1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 RPL37AP61513 92 aaKnown RBP1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 Q0VG73 95 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 C6orf52Q5T4I8 152 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 XAF1Q6GPH4 301 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 UNQ6190/PRO20217Q6UXQ8 127 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 C9orf62Q8N4C0 152 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 AMELYQ99218 206 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 RTTNQ86VV8 2226 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 PLXNA4Q9HCM2 1894 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 STRCP1A6NGW2 1772 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 CASZ1Q86V15 1759 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 MICAL3Q7RTP6 2002 aa1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 ZNF142P52746 1687 aaPredicted RBP1.13□□□□□ -2.23
DEPDC1B-204ENST00000509006 SIP14410 1827 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 COL5A1P20908 1838 aaPredicted RBP1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 TNS1Q9HBL0 1735 aaKnown RBP1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 PLXNA2O75051 1894 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 TRPM7Q96QT4 1865 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 ABCC3O15438 1527 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 CRYM-AS1A6NIL9 109 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 HCRTO43612 131 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 SEC11AP67812 179 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 PYY3Q5JQD4 70 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 C10orf128Q5T292 105 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 Q6ZRN7 208 aaPredicted RBP1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 DEFB132Q7Z7B7 95 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 DEFB119Q8N690 84 aa1.12□□□□□ -2.23
DEPDC1B-204ENST00000509006 ZNF563Q8TA94 476 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms