RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 TRPM7Q96QT4 1865 aa2.22□□□□□ -2.05
LINC01088-203ENST00000507476 TRAV13-2A0A0B4J235 113 aa2.21□□□□□ -2.06
LINC01088-203ENST00000507476 NUPR2A6NF83 97 aa2.21□□□□□ -2.06
LINC01088-203ENST00000507476 HIGD1CA8MV81 97 aa2.21□□□□□ -2.06
LINC01088-203ENST00000507476 KRTAP12-4P60329 112 aa2.21□□□□□ -2.06
LINC01088-203ENST00000507476 CPSF1Q10570 1443 aaKnown RBP2.21□□□□□ -2.06
LINC01088-203ENST00000507476 SPATA45Q537H7 98 aa2.21□□□□□ -2.06
LINC01088-203ENST00000507476 COMMD6Q7Z4G1 85 aa2.21□□□□□ -2.06
LINC01088-203ENST00000507476 IFI27L1Q96BM0 104 aa2.21□□□□□ -2.06
LINC01088-203ENST00000507476 LIMD2Q9BT23 127 aa2.21□□□□□ -2.06
LINC01088-203ENST00000507476 DPH3P1Q9H4G8 78 aa2.21□□□□□ -2.06
LINC01088-203ENST00000507476 EML5Q05BV3 1969 aa2.21□□□□□ -2.06
LINC01088-203ENST00000507476 RBBP6Q7Z6E9 1792 aaKnown RBP2.21□□□□□ -2.06
LINC01088-203ENST00000507476 CC2D2AQ9P2K1 1620 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 MED14O60244 1454 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 PTPRMP28827 1452 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 GAPVD1Q14C86 1478 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 CCDC18Q5T9S5 1454 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 IFT140Q96RY7 1462 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 C10orf71Q711Q0 1435 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 PHIPQ8WWQ0 1821 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 TRAV12-3A0A0B4J271 114 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 CXorf51AA0A1B0GTR3 108 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 IGHV3-30P01768 117 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 IGHV3-30-5P0DP03 117 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 RNASE3P12724 160 aaKnown RBP2.2□□□□□ -2.06
LINC01088-203ENST00000507476 LINC00322Q6ZN03 302 aaPredicted RBP2.2□□□□□ -2.06
LINC01088-203ENST00000507476 PPP1R1CQ8WVI7 109 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 ROBO1Q9Y6N7 1651 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 ADGRB3O60242 1522 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 RP1P56715 2156 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 LAMB1P07942 1786 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 MICAL3Q7RTP6 2002 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 PLXNA2O75051 1894 aa2.2□□□□□ -2.06
LINC01088-203ENST00000507476 BRWD1Q9NSI6 2320 aa2.19□□□□□ -2.06
LINC01088-203ENST00000507476 GNG11P61952 73 aa2.19□□□□□ -2.06
LINC01088-203ENST00000507476 MAGI1Q96QZ7 1491 aaPredicted RBP2.19□□□□□ -2.06
LINC01088-203ENST00000507476 LTBP2Q14767 1821 aa2.19□□□□□ -2.06
LINC01088-203ENST00000507476 FBN1P35555 2871 aaKnown RBP2.18□□□□□ -2.06
LINC01088-203ENST00000507476 TRBV6-7A0A0A0MS04 114 aa2.18□□□□□ -2.06
LINC01088-203ENST00000507476 RBAKDNA6NC62 111 aa2.18□□□□□ -2.06
LINC01088-203ENST00000507476 HCG22E2RYF7 251 aa2.18□□□□□ -2.06
LINC01088-203ENST00000507476 GNGT2O14610 69 aa2.18□□□□□ -2.06
LINC01088-203ENST00000507476 MRPS14O60783 128 aaKnown RBP2.18□□□□□ -2.06
LINC01088-203ENST00000507476 IL9P15248 144 aa2.18□□□□□ -2.06
LINC01088-203ENST00000507476 CCL8P80075 99 aa2.18□□□□□ -2.06
LINC01088-203ENST00000507476 LINC00312Q9Y6C7 94 aa2.18□□□□□ -2.06
LINC01088-203ENST00000507476 KDM6BO15054 1643 aa2.17□□□□□ -2.06
LINC01088-203ENST00000507476 NAP1L6A6NFF2 107 aa2.17□□□□□ -2.06
LINC01088-203ENST00000507476 INE1O15225 51 aa2.17□□□□□ -2.06
LINC01088-203ENST00000507476 PDE6GP18545 87 aa2.17□□□□□ -2.06
LINC01088-203ENST00000507476 GDF5OSQ5U4N7 250 aa2.17□□□□□ -2.06
LINC01088-203ENST00000507476 CYP4F30PQ9H0H9 118 aa2.17□□□□□ -2.06
LINC01088-203ENST00000507476 CRCT1Q9UGL9 99 aa2.17□□□□□ -2.06
LINC01088-203ENST00000507476 ABCA3Q99758 1704 aa2.17□□□□□ -2.06
LINC01088-203ENST00000507476 MPDZO75970 2070 aa2.16□□□□□ -2.06
LINC01088-203ENST00000507476 TEX49A0A1B0GTD5 131 aa2.16□□□□□ -2.06
LINC01088-203ENST00000507476 MT-ATP8P03928 68 aa2.16□□□□□ -2.06
LINC01088-203ENST00000507476 C10orf128Q5T292 105 aa2.16□□□□□ -2.06
LINC01088-203ENST00000507476 FAM74A4Q5TZK3 123 aa2.16□□□□□ -2.06
LINC01088-203ENST00000507476 ZNF818PQ6ZRF7 136 aa2.16□□□□□ -2.06
LINC01088-203ENST00000507476 Q6ZRN7 208 aaPredicted RBP2.16□□□□□ -2.06
LINC01088-203ENST00000507476 C15orf53Q8NAA6 179 aa2.16□□□□□ -2.06
LINC01088-203ENST00000507476 C10orf82Q8WW14 230 aa2.16□□□□□ -2.06
LINC01088-203ENST00000507476 PTPRFP10586 1907 aa2.16□□□□□ -2.06
LINC01088-203ENST00000507476 CASKIN1Q8WXD9 1431 aa2.16□□□□□ -2.06
LINC01088-203ENST00000507476 TOPAZ1Q8N9V7 1692 aa2.15□□□□□ -2.06
LINC01088-203ENST00000507476 M0R2N4 97 aa2.15□□□□□ -2.07
LINC01088-203ENST00000507476 SIX6O95475 246 aa2.15□□□□□ -2.07
LINC01088-203ENST00000507476 IGLV3-1P01715 115 aa2.15□□□□□ -2.07
LINC01088-203ENST00000507476 Q0VG73 95 aa2.15□□□□□ -2.07
LINC01088-203ENST00000507476 SPRNQ5BIV9 151 aa2.15□□□□□ -2.07
LINC01088-203ENST00000507476 ODF3Q96PU9 254 aa2.15□□□□□ -2.07
LINC01088-203ENST00000507476 PMCHL2Q9BQD1 86 aa2.15□□□□□ -2.07
LINC01088-203ENST00000507476 HEATR1Q9H583 2144 aaKnown RBP2.15□□□□□ -2.07
LINC01088-203ENST00000507476 ABCC5O15440 1437 aa2.15□□□□□ -2.07
LINC01088-203ENST00000507476 SCAPERQ9BY12 1400 aa2.15□□□□□ -2.07
LINC01088-203ENST00000507476 KDM5AP29375 1690 aaKnown RBP2.15□□□□□ -2.07
LINC01088-203ENST00000507476 CEP192Q8TEP8 1941 aa2.15□□□□□ -2.07
LINC01088-203ENST00000507476 NINQ8N4C6 2090 aa2.14□□□□□ -2.07
LINC01088-203ENST00000507476 ARHGAP35Q9NRY4 1499 aa2.14□□□□□ -2.07
LINC01088-203ENST00000507476 MED12LQ86YW9 2145 aa2.14□□□□□ -2.07
LINC01088-203ENST00000507476 ABCC3O15438 1527 aa2.14□□□□□ -2.07
LINC01088-203ENST00000507476 IGKV3-7A0A075B6H7 116 aa2.14□□□□□ -2.07
LINC01088-203ENST00000507476 IGKV3D-7A0A0C4DH55 119 aa2.14□□□□□ -2.07
LINC01088-203ENST00000507476 IGKV3OR2-268A0A0C4DH90 116 aa2.14□□□□□ -2.07
LINC01088-203ENST00000507476 IGLC1P0CG04 106 aa2.14□□□□□ -2.07
LINC01088-203ENST00000507476 RPL37AP61513 92 aaKnown RBP2.14□□□□□ -2.07
LINC01088-203ENST00000507476 SSBP1Q04837 148 aaKnown RBP2.14□□□□□ -2.07
LINC01088-203ENST00000507476 LCN9Q8WX39 176 aa2.14□□□□□ -2.07
LINC01088-203ENST00000507476 TNS1Q9HBL0 1735 aaKnown RBP2.14□□□□□ -2.07
LINC01088-203ENST00000507476 SHROOM2Q13796 1616 aa2.13□□□□□ -2.07
LINC01088-203ENST00000507476 SIP14410 1827 aa2.13□□□□□ -2.07
LINC01088-203ENST00000507476 CRYM-AS1A6NIL9 109 aa2.13□□□□□ -2.07
LINC01088-203ENST00000507476 PCNX2A6NKB5 2137 aa2.13□□□□□ -2.07
LINC01088-203ENST00000507476 ZNF625Q96I27 306 aaPredicted RBP2.13□□□□□ -2.07
LINC01088-203ENST00000507476 MGST2Q99735 147 aa2.13□□□□□ -2.07
LINC01088-203ENST00000507476 NWD2Q9ULI1 1742 aa2.13□□□□□ -2.07
LINC01088-203ENST00000507476 DOCK1Q14185 1865 aa2.13□□□□□ -2.07
LINC01088-203ENST00000507476 MUC22E2RYF6 1773 aaPredicted RBP2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms