RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 MED23Q9ULK4 1368 aa-0.71□□□□□ -2.52
SMAD1-203ENST00000502342 ARHGAP31Q2M1Z3 1444 aa-0.72□□□□□ -2.52
SMAD1-203ENST00000502342 PCLOQ9Y6V0 5065 aa-0.72□□□□□ -2.52
SMAD1-203ENST00000502342 A0A0D9SFI3 127 aa-0.72□□□□□ -2.52
SMAD1-203ENST00000502342 TMEM238C9JI98 176 aa-0.72□□□□□ -2.52
SMAD1-203ENST00000502342 SLC25A6P12236 298 aa-0.72□□□□□ -2.52
SMAD1-203ENST00000502342 INSL4Q14641 139 aa-0.72□□□□□ -2.52
SMAD1-203ENST00000502342 KRTAP19-7Q3SYF9 63 aa-0.72□□□□□ -2.52
SMAD1-203ENST00000502342 NDUFA11Q86Y39 141 aa-0.72□□□□□ -2.52
SMAD1-203ENST00000502342 SNX29P2Q8IUI4 249 aa-0.72□□□□□ -2.52
SMAD1-203ENST00000502342 Q96NJ1 140 aa-0.72□□□□□ -2.52
SMAD1-203ENST00000502342 CCDC115Q96NT0 180 aa-0.72□□□□□ -2.52
SMAD1-203ENST00000502342 SCP2D1Q9UJQ7 156 aa-0.72□□□□□ -2.52
SMAD1-203ENST00000502342 PLXNA1Q9UIW2 1896 aa-0.72□□□□□ -2.52
SMAD1-203ENST00000502342 KIF13AQ9H1H9 1805 aa-0.73□□□□□ -2.53
SMAD1-203ENST00000502342 DEGS1O15121 323 aa-0.73□□□□□ -2.53
SMAD1-203ENST00000502342 SPAG11BQ08648 103 aa-0.73□□□□□ -2.53
SMAD1-203ENST00000502342 C20orf197Q8N268 126 aa-0.73□□□□□ -2.53
SMAD1-203ENST00000502342 COX7B2Q8TF08 81 aa-0.73□□□□□ -2.53
SMAD1-203ENST00000502342 DYNLRB2Q8TF09 96 aa-0.73□□□□□ -2.53
SMAD1-203ENST00000502342 CNFNQ9BYD5 112 aa-0.73□□□□□ -2.53
SMAD1-203ENST00000502342 BATF3Q9NR55 127 aa-0.73□□□□□ -2.53
SMAD1-203ENST00000502342 ERG28Q9UKR5 140 aa-0.73□□□□□ -2.53
SMAD1-203ENST00000502342 PIEZO2Q9H5I5 2752 aa-0.74□□□□□ -2.53
SMAD1-203ENST00000502342 CASZ1Q86V15 1759 aa-0.74□□□□□ -2.53
SMAD1-203ENST00000502342 TRGV1A0A0A0MS02 117 aa-0.74□□□□□ -2.53
SMAD1-203ENST00000502342 BORCS7-ASMTA0A0B4J1R7 106 aa-0.74□□□□□ -2.53
SMAD1-203ENST00000502342 PRM1P04553 51 aa-0.74□□□□□ -2.53
SMAD1-203ENST00000502342 NPC2P61916 151 aa-0.74□□□□□ -2.53
SMAD1-203ENST00000502342 PCBD2Q9H0N5 130 aa-0.74□□□□□ -2.53
SMAD1-203ENST00000502342 CALML5Q9NZT1 146 aa-0.74□□□□□ -2.53
SMAD1-203ENST00000502342 NOP16Q9Y3C1 178 aaKnown RBP-0.74□□□□□ -2.53
SMAD1-203ENST00000502342 SPTBN1Q01082 2364 aaKnown RBP-0.74□□□□□ -2.53
SMAD1-203ENST00000502342 PTPRMP28827 1452 aa-0.74□□□□□ -2.53
SMAD1-203ENST00000502342 GOLGA3Q08378 1498 aa-0.74□□□□□ -2.53
SMAD1-203ENST00000502342 PPRC1Q5VV67 1664 aaKnown RBP-0.75□□□□□ -2.53
SMAD1-203ENST00000502342 ACANP16112 2415 aa-0.75□□□□□ -2.53
SMAD1-203ENST00000502342 AKAP11Q9UKA4 1901 aa-0.75□□□□□ -2.53
SMAD1-203ENST00000502342 VWFP04275 2813 aa-0.75□□□□□ -2.53
SMAD1-203ENST00000502342 TRAV22A0A0B4J277 110 aa-0.75□□□□□ -2.53
SMAD1-203ENST00000502342 E5RI56 91 aa-0.75□□□□□ -2.53
SMAD1-203ENST00000502342 SPINK8P0C7L1 97 aa-0.75□□□□□ -2.53
SMAD1-203ENST00000502342 G0S2P27469 103 aa-0.75□□□□□ -2.53
SMAD1-203ENST00000502342 Q5VSD8 79 aa-0.75□□□□□ -2.53
SMAD1-203ENST00000502342 OR9Q1Q8NGQ5 310 aa-0.75□□□□□ -2.53
SMAD1-203ENST00000502342 BSNQ9UPA5 3926 aa-0.76□□□□□ -2.53
SMAD1-203ENST00000502342 RBP4P02753 201 aa-0.76□□□□□ -2.53
SMAD1-203ENST00000502342 SPCS2Q15005 226 aa-0.76□□□□□ -2.53
SMAD1-203ENST00000502342 TMEM35BQ8NCS4 154 aa-0.76□□□□□ -2.53
SMAD1-203ENST00000502342 ATP6V0E2Q8NHE4 81 aa-0.76□□□□□ -2.53
SMAD1-203ENST00000502342 BANF2Q9H503 90 aa-0.76□□□□□ -2.53
SMAD1-203ENST00000502342 PHIPQ8WWQ0 1821 aa-0.76□□□□□ -2.53
SMAD1-203ENST00000502342 PDZD2O15018 2839 aa-0.76□□□□□ -2.53
SMAD1-203ENST00000502342 WNK1Q9H4A3 2382 aa-0.77□□□□□ -2.53
SMAD1-203ENST00000502342 ARAP1Q96P48 1450 aa-0.77□□□□□ -2.53
SMAD1-203ENST00000502342 TRAV12-3A0A0B4J271 114 aa-0.77□□□□□ -2.53
SMAD1-203ENST00000502342 SMIM24O75264 130 aa-0.77□□□□□ -2.53
SMAD1-203ENST00000502342 DPM2O94777 84 aa-0.77□□□□□ -2.53
SMAD1-203ENST00000502342 SAMD13Q5VXD3 122 aa-0.77□□□□□ -2.53
SMAD1-203ENST00000502342 Q8IZM0 81 aa-0.77□□□□□ -2.53
SMAD1-203ENST00000502342 CDC26Q8NHZ8 85 aa-0.77□□□□□ -2.53
SMAD1-203ENST00000502342 KIAA0100Q14667 2235 aaKnown RBP-0.77□□□□□ -2.53
SMAD1-203ENST00000502342 NRXN2Q9P2S2 1712 aa-0.78□□□□□ -2.53
SMAD1-203ENST00000502342 UHRF1BP1LA0JNW5 1464 aa-0.78□□□□□ -2.53
SMAD1-203ENST00000502342 OVOS2A0A0G2JMS6 1433 aa-0.78□□□□□ -2.53
SMAD1-203ENST00000502342 PLCE1Q9P212 2302 aa-0.78□□□□□ -2.53
SMAD1-203ENST00000502342 COL6A3P12111 3177 aa-0.78□□□□□ -2.53
SMAD1-203ENST00000502342 TRBV10-3A0A0K0K1G6 114 aa-0.78□□□□□ -2.53
SMAD1-203ENST00000502342 CCDC179H3BU77 68 aa-0.78□□□□□ -2.53
SMAD1-203ENST00000502342 J3QLW9 94 aa-0.78□□□□□ -2.53
SMAD1-203ENST00000502342 YPEL1O60688 119 aa-0.78□□□□□ -2.53
SMAD1-203ENST00000502342 PAEPP09466 180 aa-0.78□□□□□ -2.53
SMAD1-203ENST00000502342 GNG10P50151 68 aa-0.78□□□□□ -2.53
SMAD1-203ENST00000502342 TMEM91Q6ZNR0 172 aa-0.78□□□□□ -2.53
SMAD1-203ENST00000502342 G3V318 75 aa-0.79□□□□□ -2.54
SMAD1-203ENST00000502342 MT-ND4LP03901 98 aa-0.79□□□□□ -2.54
SMAD1-203ENST00000502342 OR8I2Q8N0Y5 310 aa-0.79□□□□□ -2.54
SMAD1-203ENST00000502342 DNAJC15Q9Y5T4 150 aa-0.79□□□□□ -2.54
SMAD1-203ENST00000502342 CSPG4Q6UVK1 2322 aa-0.8□□□□□ -2.54
SMAD1-203ENST00000502342 NEBP20929 6669 aa-0.8□□□□□ -2.54
SMAD1-203ENST00000502342 SPTA1P02549 2419 aa-0.8□□□□□ -2.54
SMAD1-203ENST00000502342 TRAV1-2A0A0B4J238 106 aa-0.8□□□□□ -2.54
SMAD1-203ENST00000502342 A0A1B0GV72 72 aa-0.8□□□□□ -2.54
SMAD1-203ENST00000502342 J3KT08 172 aa-0.8□□□□□ -2.54
SMAD1-203ENST00000502342 HLA-DRB4P13762 266 aa-0.8□□□□□ -2.54
SMAD1-203ENST00000502342 SPRR1AP35321 89 aa-0.8□□□□□ -2.54
SMAD1-203ENST00000502342 TMEM128Q5BJH2 165 aa-0.8□□□□□ -2.54
SMAD1-203ENST00000502342 CLLU1Q5K131 121 aa-0.8□□□□□ -2.54
SMAD1-203ENST00000502342 TOMM20LQ6UXN7 152 aa-0.8□□□□□ -2.54
SMAD1-203ENST00000502342 HLA-DRB4X5D2U9 266 aa-0.8□□□□□ -2.54
SMAD1-203ENST00000502342 PARP14Q460N5 1801 aa-0.8□□□□□ -2.54
SMAD1-203ENST00000502342 ARFGEF1Q9Y6D6 1849 aa-0.8□□□□□ -2.54
SMAD1-203ENST00000502342 PIN1P1O15428 100 aa-0.81□□□□□ -2.54
SMAD1-203ENST00000502342 EDDM3BP56851 147 aa-0.81□□□□□ -2.54
SMAD1-203ENST00000502342 ATP11AUNQ6ZP68 121 aa-0.81□□□□□ -2.54
SMAD1-203ENST00000502342 GVINP1Q7Z2Y8 2422 aa-0.81□□□□□ -2.54
SMAD1-203ENST00000502342 FLNBO75369 2602 aaKnown RBP-0.82□□□□□ -2.54
SMAD1-203ENST00000502342 MAP1AP78559 2803 aaPredicted RBP-0.82□□□□□ -2.54
SMAD1-203ENST00000502342 STAB2Q8WWQ8 2551 aa-0.82□□□□□ -2.54
SMAD1-203ENST00000502342 FAT2Q9NYQ8 4349 aa-0.82□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms