RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 LINC01590Q5TEZ4 76 aa4.87□□□□□ -1.63
SNX13-212ENST00000498463 IFI27L1Q96BM0 104 aa4.87□□□□□ -1.63
SNX13-212ENST00000498463 CCL13Q99616 98 aa4.87□□□□□ -1.63
SNX13-212ENST00000498463 RNASE7Q9H1E1 156 aaKnown RBP4.87□□□□□ -1.63
SNX13-212ENST00000498463 CASP8AP2Q9UKL3 1982 aa4.86□□□□□ -1.63
SNX13-212ENST00000498463 A0A1B0GVY2 172 aa4.86□□□□□ -1.63
SNX13-212ENST00000498463 SLC25A20O43772 301 aa4.86□□□□□ -1.63
SNX13-212ENST00000498463 GYPBP06028 91 aa4.86□□□□□ -1.63
SNX13-212ENST00000498463 CXCL8P10145 99 aa4.86□□□□□ -1.63
SNX13-212ENST00000498463 HBBP68871 147 aa4.86□□□□□ -1.63
SNX13-212ENST00000498463 CCL8P80075 99 aa4.86□□□□□ -1.63
SNX13-212ENST00000498463 Q5XG85 94 aa4.86□□□□□ -1.63
SNX13-212ENST00000498463 SLC48A1Q6P1K1 146 aa4.86□□□□□ -1.63
SNX13-212ENST00000498463 CARD19Q96LW7 228 aa4.86□□□□□ -1.63
SNX13-212ENST00000498463 SERP1Q9Y6X1 66 aa4.86□□□□□ -1.63
SNX13-212ENST00000498463 NUP98P52948 1817 aa4.86□□□□□ -1.63
SNX13-212ENST00000498463 LCTP09848 1927 aa4.85□□□□□ -1.63
SNX13-212ENST00000498463 OOSP1A8MZH6 123 aa4.85□□□□□ -1.63
SNX13-212ENST00000498463 HMGN2P05204 90 aaKnown RBP4.85□□□□□ -1.63
SNX13-212ENST00000498463 ATP5EP56381 51 aaPredicted RBP4.85□□□□□ -1.63
SNX13-212ENST00000498463 NPC2P61916 151 aa4.85□□□□□ -1.63
SNX13-212ENST00000498463 Q6ZQT7 251 aa4.85□□□□□ -1.63
SNX13-212ENST00000498463 LINC00643Q86TS7 51 aa4.85□□□□□ -1.63
SNX13-212ENST00000498463 DYNLRB1Q9NP97 96 aa4.85□□□□□ -1.63
SNX13-212ENST00000498463 EPDR1Q9UM22 224 aa4.85□□□□□ -1.63
SNX13-212ENST00000498463 PAPPA2Q9BXP8 1791 aa4.85□□□□□ -1.63
SNX13-212ENST00000498463 PLXNA2O75051 1894 aa4.85□□□□□ -1.63
SNX13-212ENST00000498463 NUP210Q8TEM1 1887 aaPredicted RBP4.85□□□□□ -1.63
SNX13-212ENST00000498463 ANAPC1Q9H1A4 1944 aa4.85□□□□□ -1.63
SNX13-212ENST00000498463 OBSL1O75147 1896 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 FAM236DA0A1B0GTK5 79 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 FAM236AA0A1B0GUQ0 79 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 UBE2L5PA0A1B0GUS4 154 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 FAM236BA0A1B0GV22 79 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 LYZL6O75951 148 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 IGHV3-53P01767 116 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 FAM236CP0DP71 79 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 NPPCP23582 126 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 FXYD2P54710 66 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 DSCR4P56555 118 aaPredicted RBP4.84□□□□□ -1.63
SNX13-212ENST00000498463 UBE2D3P61077 147 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 UBE2D2P62837 147 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 MRPL51Q4U2R6 128 aaKnown RBP4.84□□□□□ -1.63
SNX13-212ENST00000498463 C22orf39Q6P5X5 142 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 KLK6Q92876 244 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 ZC2HC1AQ96GY0 325 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 ARHGAP5-AS1Q96IT6 56 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 WFDC6Q9BQY6 131 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 RTL8AQ9BWD3 113 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 TTTY10Q9BZA0 68 aa4.84□□□□□ -1.63
SNX13-212ENST00000498463 ZNF831Q5JPB2 1677 aa4.83□□□□□ -1.64
SNX13-212ENST00000498463 TRAV17A0A0B4J275 112 aa4.83□□□□□ -1.64
SNX13-212ENST00000498463 A0A0J9YW62 118 aa4.83□□□□□ -1.64
SNX13-212ENST00000498463 RBAKDNA6NC62 111 aa4.83□□□□□ -1.64
SNX13-212ENST00000498463 MOBPQ13875 183 aa4.83□□□□□ -1.64
SNX13-212ENST00000498463 SPINT4Q6UDR6 99 aa4.83□□□□□ -1.64
SNX13-212ENST00000498463 PFN4Q8NHR9 129 aa4.83□□□□□ -1.64
SNX13-212ENST00000498463 TRGV9Q99603 122 aa4.83□□□□□ -1.64
SNX13-212ENST00000498463 COL4A4P53420 1690 aaPredicted RBP4.83□□□□□ -1.64
SNX13-212ENST00000498463 THSD7AQ9UPZ6 1657 aa4.83□□□□□ -1.64
SNX13-212ENST00000498463 TRBV25-1A0A075B6N4 114 aa4.82□□□□□ -1.64
SNX13-212ENST00000498463 H3BT86 120 aa4.82□□□□□ -1.64
SNX13-212ENST00000498463 COX7A2LO14548 114 aa4.82□□□□□ -1.64
SNX13-212ENST00000498463 IGHV3-30-3P0DP02 117 aa4.82□□□□□ -1.64
SNX13-212ENST00000498463 COL8A2P25067 703 aa4.82□□□□□ -1.64
SNX13-212ENST00000498463 ATXN8Q156A1 80 aa4.82□□□□□ -1.64
SNX13-212ENST00000498463 CST6Q15828 149 aa4.82□□□□□ -1.64
SNX13-212ENST00000498463 DEFB121Q5J5C9 76 aa4.82□□□□□ -1.64
SNX13-212ENST00000498463 SCXQ7RTU7 201 aa4.82□□□□□ -1.64
SNX13-212ENST00000498463 NXT2Q9NPJ8 142 aaKnown RBP4.82□□□□□ -1.64
SNX13-212ENST00000498463 NUMA1Q14980 2115 aa4.82□□□□□ -1.64
SNX13-212ENST00000498463 GREB1Q4ZG55 1949 aa4.82□□□□□ -1.64
SNX13-212ENST00000498463 IGKV1D-37A0A075B6S9 117 aa4.81□□□□□ -1.64
SNX13-212ENST00000498463 LOC107984156A0A0G2JMH3 177 aa4.81□□□□□ -1.64
SNX13-212ENST00000498463 CXorf51AA0A1B0GTR3 108 aa4.81□□□□□ -1.64
SNX13-212ENST00000498463 LY6LH3BQJ8 138 aa4.81□□□□□ -1.64
SNX13-212ENST00000498463 HBDP02042 147 aa4.81□□□□□ -1.64
SNX13-212ENST00000498463 INAFM2P0DMQ5 153 aa4.81□□□□□ -1.64
SNX13-212ENST00000498463 TSPEAR-AS2P59090 65 aa4.81□□□□□ -1.64
SNX13-212ENST00000498463 FKBP1CQ5VVH2 108 aa4.81□□□□□ -1.64
SNX13-212ENST00000498463 GPHB5Q86YW7 130 aa4.81□□□□□ -1.64
SNX13-212ENST00000498463 ARL17AQ8IVW1 177 aa4.81□□□□□ -1.64
SNX13-212ENST00000498463 SERP2Q8N6R1 65 aa4.81□□□□□ -1.64
SNX13-212ENST00000498463 BORCS8Q96FH0 119 aa4.81□□□□□ -1.64
SNX13-212ENST00000498463 ODF3Q96PU9 254 aa4.81□□□□□ -1.64
SNX13-212ENST00000498463 NPCDR1Q9BY65 106 aa4.81□□□□□ -1.64
SNX13-212ENST00000498463 PLXNB2O15031 1838 aa4.81□□□□□ -1.64
SNX13-212ENST00000498463 MED12LQ86YW9 2145 aa4.81□□□□□ -1.64
SNX13-212ENST00000498463 COL18A1P39060 1754 aa4.81□□□□□ -1.64
SNX13-212ENST00000498463 TRGV5A0A0B4J1U4 118 aa4.8□□□□□ -1.64
SNX13-212ENST00000498463 KNCNA6PVL3 124 aa4.8□□□□□ -1.64
SNX13-212ENST00000498463 H3BVH4 76 aa4.8□□□□□ -1.64
SNX13-212ENST00000498463 BCE1O60756 84 aa4.8□□□□□ -1.64
SNX13-212ENST00000498463 PIRTP0C851 137 aa4.8□□□□□ -1.64
SNX13-212ENST00000498463 PCBD1P61457 104 aa4.8□□□□□ -1.64
SNX13-212ENST00000498463 ZNF56Q15929 161 aa4.8□□□□□ -1.64
SNX13-212ENST00000498463 AICDAQ9GZX7 198 aa4.8□□□□□ -1.64
SNX13-212ENST00000498463 AMMECR1Q9Y4X0 333 aaPredicted RBP4.8□□□□□ -1.64
SNX13-212ENST00000498463 TRBV20OR9-2A0A075B6H5 130 aa4.79□□□□□ -1.64
SNX13-212ENST00000498463 TRBV19A0A075B6N1 114 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms