RNA–Protein interactions for RNA: ENST00000497048.5

KLF4-205, Transcript of Kruppel like factor 4, humanhuman

TSL 2

Gene KLF4, Length 2,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4-205ENST00000497048 AAMDCQ9H7C9 122 aa12.77□□□□□ -0.37
KLF4-205ENST00000497048 MRPL35Q9NZE8 188 aaKnown RBP12.77□□□□□ -0.37
KLF4-205ENST00000497048 TEP1Q99973 2627 aaKnown RBP12.76□□□□□ -0.37
KLF4-205ENST00000497048 BRI3O95415 125 aa12.76□□□□□ -0.37
KLF4-205ENST00000497048 PSMB2P49721 201 aa12.76□□□□□ -0.37
KLF4-205ENST00000497048 ZFP2Q6ZN57 461 aa12.76□□□□□ -0.37
KLF4-205ENST00000497048 KLK15Q9H2R5 256 aa12.76□□□□□ -0.37
KLF4-205ENST00000497048 ESM1Q9NQ30 184 aa12.76□□□□□ -0.37
KLF4-205ENST00000497048 FAM223BA6NKX1 122 aa12.76□□□□□ -0.37
KLF4-205ENST00000497048 SCGB2A1O75556 95 aa12.76□□□□□ -0.37
KLF4-205ENST00000497048 TWIST1Q15672 202 aa12.76□□□□□ -0.37
KLF4-205ENST00000497048 TAL2Q16559 108 aa12.76□□□□□ -0.37
KLF4-205ENST00000497048 FAM223AQ8IWN6 122 aa12.76□□□□□ -0.37
KLF4-205ENST00000497048 FAM110AQ9BQ89 295 aa12.76□□□□□ -0.37
KLF4-205ENST00000497048 NIPBLQ6KC79 2804 aaeCLIP12.75□□□□□ -0.37
KLF4-205ENST00000497048 TRBV7-1A0A0A6YYK4 115 aa12.75□□□□□ -0.37
KLF4-205ENST00000497048 MRPS12O15235 138 aaKnown RBP12.75□□□□□ -0.37
KLF4-205ENST00000497048 ZFAND6Q6FIF0 208 aa12.75□□□□□ -0.37
KLF4-205ENST00000497048 TMEM86BQ8N661 226 aa12.75□□□□□ -0.37
KLF4-205ENST00000497048 TMEM158Q8WZ71 300 aa12.75□□□□□ -0.37
KLF4-205ENST00000497048 MSRB1Q9NZV6 116 aa12.75□□□□□ -0.37
KLF4-205ENST00000497048 DLX4Q92988 240 aaPredicted RBP12.74□□□□□ -0.37
KLF4-205ENST00000497048 PF4V1P10720 104 aa12.74□□□□□ -0.37
KLF4-205ENST00000497048 GATA1P15976 413 aaPredicted RBP12.74□□□□□ -0.37
KLF4-205ENST00000497048 PDE6HQ13956 83 aa12.74□□□□□ -0.37
KLF4-205ENST00000497048 ZFAND3Q9H8U3 227 aa12.74□□□□□ -0.37
KLF4-205ENST00000497048 RPL32P62910 135 aaKnown RBP12.73□□□□□ -0.37
KLF4-205ENST00000497048 CFHR3Q02985 330 aa12.73□□□□□ -0.37
KLF4-205ENST00000497048 LOC107984156A0A0G2JMH3 177 aa12.73□□□□□ -0.37
KLF4-205ENST00000497048 CCDC179H3BU77 68 aa12.73□□□□□ -0.37
KLF4-205ENST00000497048 SH2D1AO60880 128 aa12.73□□□□□ -0.37
KLF4-205ENST00000497048 HLA-DRB4P13762 266 aa12.73□□□□□ -0.37
KLF4-205ENST00000497048 ARL17AQ8IVW1 177 aa12.73□□□□□ -0.37
KLF4-205ENST00000497048 MAP1LC3AQ9H492 121 aa12.73□□□□□ -0.37
KLF4-205ENST00000497048 HLA-DRB4X5D2U9 266 aa12.73□□□□□ -0.37
KLF4-205ENST00000497048 IGLV1-40P01703 118 aa12.72□□□□□ -0.37
KLF4-205ENST00000497048 TRBV12-3P01733 135 aa12.72□□□□□ -0.37
KLF4-205ENST00000497048 IGHV3-11P01762 117 aa12.72□□□□□ -0.37
KLF4-205ENST00000497048 PPDPFLQ8WWR9 84 aa12.72□□□□□ -0.37
KLF4-205ENST00000497048 RNF185Q96GF1 192 aa12.72□□□□□ -0.37
KLF4-205ENST00000497048 TRBV20-1A0A075B6N2 111 aa12.72□□□□□ -0.37
KLF4-205ENST00000497048 H3BUA1 57 aa12.72□□□□□ -0.37
KLF4-205ENST00000497048 PSMG4Q5JS54 123 aa12.72□□□□□ -0.37
KLF4-205ENST00000497048 C10orf99Q6UWK7 81 aa12.72□□□□□ -0.37
KLF4-205ENST00000497048 LINC01549A6NIU2 74 aa12.71□□□□□ -0.37
KLF4-205ENST00000497048 HILS1P60008 231 aa12.71□□□□□ -0.38
KLF4-205ENST00000497048 CITED1Q99966 193 aa12.71□□□□□ -0.38
KLF4-205ENST00000497048 CRLF1O75462 422 aa12.7□□□□□ -0.38
KLF4-205ENST00000497048 TEN1Q86WV5 123 aa12.7□□□□□ -0.38
KLF4-205ENST00000497048 CLPSL1A2RUU4 121 aa12.7□□□□□ -0.38
KLF4-205ENST00000497048 LINC01546A6NGU7 62 aa12.7□□□□□ -0.38
KLF4-205ENST00000497048 TNFRSF6BO95407 300 aa12.7□□□□□ -0.38
KLF4-205ENST00000497048 ARL3P36405 182 aa12.7□□□□□ -0.38
KLF4-205ENST00000497048 ZNF702PQ9H963 129 aa12.7□□□□□ -0.38
KLF4-205ENST00000497048 IGKV2-40A0A087WW87 121 aaPredicted RBP12.69□□□□□ -0.38
KLF4-205ENST00000497048 ATP5LO75964 103 aa12.69□□□□□ -0.38
KLF4-205ENST00000497048 IGKV2D-40P01614 121 aaPredicted RBP12.69□□□□□ -0.38
KLF4-205ENST00000497048 USMG5Q96IX5 58 aa12.69□□□□□ -0.38
KLF4-205ENST00000497048 ZNF580Q9UK33 172 aa12.69□□□□□ -0.38
KLF4-205ENST00000497048 ZNF688P0C7X2 276 aa12.69□□□□□ -0.38
KLF4-205ENST00000497048 IGHV3OR16-13A0A075B7E8 117 aa12.68□□□□□ -0.38
KLF4-205ENST00000497048 IGHV3-74A0A0B4J1X5 117 aa12.68□□□□□ -0.38
KLF4-205ENST00000497048 IGHV3-66A0A0C4DH42 116 aa12.68□□□□□ -0.38
KLF4-205ENST00000497048 PRR25Q96S07 402 aa12.68□□□□□ -0.38
KLF4-205ENST00000497048 SETD2Q9BYW2 2564 aaPredicted RBP12.68□□□□□ -0.38
KLF4-205ENST00000497048 IGHG4P01861 327 aa12.67□□□□□ -0.38
KLF4-205ENST00000497048 RNASE1P07998 156 aaKnown RBP12.67□□□□□ -0.38
KLF4-205ENST00000497048 ZNF575Q86XF7 245 aa12.67□□□□□ -0.38
KLF4-205ENST00000497048 IGHV3-49A0A0A0MS15 119 aa12.67□□□□□ -0.38
KLF4-205ENST00000497048 H3BVH4 76 aa12.67□□□□□ -0.38
KLF4-205ENST00000497048 PSMB8P28062 276 aa12.67□□□□□ -0.38
KLF4-205ENST00000497048 COX8CQ7Z4L0 72 aa12.67□□□□□ -0.38
KLF4-205ENST00000497048 RPL7P18124 248 aaKnown RBP12.66□□□□□ -0.38
KLF4-205ENST00000497048 NDUFV3P56181 108 aaKnown RBP12.66□□□□□ -0.38
KLF4-205ENST00000497048 ANKRD29Q8N6D5 301 aa12.66□□□□□ -0.38
KLF4-205ENST00000497048 SMAD5-AS1Q9Y6J3 95 aa12.66□□□□□ -0.38
KLF4-205ENST00000497048 MYMXA0A1B0GTQ4 84 aa12.66□□□□□ -0.38
KLF4-205ENST00000497048 BUB3O43684 328 aa12.66□□□□□ -0.38
KLF4-205ENST00000497048 TCL1BO95988 128 aa12.66□□□□□ -0.38
KLF4-205ENST00000497048 LGALS1P09382 135 aaKnown RBP12.66□□□□□ -0.38
KLF4-205ENST00000497048 ZNF80P51504 273 aaPredicted RBP12.66□□□□□ -0.38
KLF4-205ENST00000497048 UNQ9165/PRO28630Q6UXU0 137 aa12.66□□□□□ -0.38
KLF4-205ENST00000497048 NXT2Q9NPJ8 142 aaKnown RBP12.66□□□□□ -0.38
KLF4-205ENST00000497048 JMJD1CQ15652 2540 aa12.65□□□□□ -0.38
KLF4-205ENST00000497048 RHODO00212 210 aa12.65□□□□□ -0.38
KLF4-205ENST00000497048 TRAV4A0A0B4J268 109 aa12.65□□□□□ -0.38
KLF4-205ENST00000497048 GAGE12JA6NER3 117 aa12.65□□□□□ -0.38
KLF4-205ENST00000497048 GAGE7O76087 117 aa12.65□□□□□ -0.38
KLF4-205ENST00000497048 GAGE12FP0CL80 117 aa12.65□□□□□ -0.38
KLF4-205ENST00000497048 GAGE12GP0CL81 117 aa12.65□□□□□ -0.38
KLF4-205ENST00000497048 GAGE12IP0CL82 117 aa12.65□□□□□ -0.38
KLF4-205ENST00000497048 UBE2D3P61077 147 aa12.65□□□□□ -0.38
KLF4-205ENST00000497048 UBE2D2P62837 147 aa12.65□□□□□ -0.38
KLF4-205ENST00000497048 GAGE4Q13068 117 aa12.65□□□□□ -0.38
KLF4-205ENST00000497048 Q6ZSV7 163 aa12.65□□□□□ -0.38
KLF4-205ENST00000497048 Q8TAT8 98 aa12.65□□□□□ -0.38
KLF4-205ENST00000497048 A0A087WX48 190 aa12.64□□□□□ -0.39
KLF4-205ENST00000497048 FABP5P3A8MUU1 101 aa12.64□□□□□ -0.39
KLF4-205ENST00000497048 SRSF2Q01130 221 aaKnown RBP12.64□□□□□ -0.39
KLF4-205ENST00000497048 Q8N2B8 174 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms