RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 TRBV6-8A0A0A6YYG3 113 aa3.75□□□□□ -1.81
SNX13-210ENST00000494402 IGLC7A0M8Q6 106 aa3.75□□□□□ -1.81
SNX13-210ENST00000494402 CRYM-AS1A6NIL9 109 aa3.75□□□□□ -1.81
SNX13-210ENST00000494402 H3BRM9 83 aa3.75□□□□□ -1.81
SNX13-210ENST00000494402 MRPS14O60783 128 aaKnown RBP3.75□□□□□ -1.81
SNX13-210ENST00000494402 SIX6O95475 246 aa3.75□□□□□ -1.81
SNX13-210ENST00000494402 TPRXLQ17RH7 258 aa3.75□□□□□ -1.81
SNX13-210ENST00000494402 CSAG1Q6PB30 78 aa3.75□□□□□ -1.81
SNX13-210ENST00000494402 ALKAL2Q6UX46 152 aa3.75□□□□□ -1.81
SNX13-210ENST00000494402 SERP2Q8N6R1 65 aa3.75□□□□□ -1.81
SNX13-210ENST00000494402 PATE1Q8WXA2 126 aa3.75□□□□□ -1.81
SNX13-210ENST00000494402 DMAC1Q96GE9 116 aa3.75□□□□□ -1.81
SNX13-210ENST00000494402 TRGV9Q99603 122 aa3.75□□□□□ -1.81
SNX13-210ENST00000494402 LAMB1P07942 1786 aa3.75□□□□□ -1.81
SNX13-210ENST00000494402 THOC2Q8NI27 1593 aaKnown RBP3.75□□□□□ -1.81
SNX13-210ENST00000494402 TNS1Q9HBL0 1735 aaKnown RBP3.75□□□□□ -1.81
SNX13-210ENST00000494402 ANK1P16157 1881 aa3.75□□□□□ -1.81
SNX13-210ENST00000494402 ARHGEF12Q9NZN5 1544 aa3.75□□□□□ -1.81
SNX13-210ENST00000494402 CDK12Q9NYV4 1490 aaPredicted RBP3.74□□□□□ -1.81
SNX13-210ENST00000494402 TRBV7-1A0A0A6YYK4 115 aa3.74□□□□□ -1.81
SNX13-210ENST00000494402 TRAV12-3A0A0B4J271 114 aa3.74□□□□□ -1.81
SNX13-210ENST00000494402 GAS8-AS1O95177 125 aa3.74□□□□□ -1.81
SNX13-210ENST00000494402 TFF1P04155 84 aa3.74□□□□□ -1.81
SNX13-210ENST00000494402 CHD3Q12873 2000 aaKnown RBP3.74□□□□□ -1.81
SNX13-210ENST00000494402 LINC00299Q6ZSB3 139 aa3.74□□□□□ -1.81
SNX13-210ENST00000494402 IFI27L1Q96BM0 104 aa3.74□□□□□ -1.81
SNX13-210ENST00000494402 CACFD1Q9UGQ2 172 aa3.74□□□□□ -1.81
SNX13-210ENST00000494402 PARP14Q460N5 1801 aa3.74□□□□□ -1.81
SNX13-210ENST00000494402 ZSWIM8A7E2V4 1837 aa3.73□□□□□ -1.81
SNX13-210ENST00000494402 TRAPPC2P0DI81 140 aa3.73□□□□□ -1.81
SNX13-210ENST00000494402 TRAPPC2BP0DI82 140 aa3.73□□□□□ -1.81
SNX13-210ENST00000494402 KRTAP13-2Q52LG2 175 aa3.73□□□□□ -1.81
SNX13-210ENST00000494402 PRR9Q5T870 116 aa3.73□□□□□ -1.81
SNX13-210ENST00000494402 SH2D6Q7Z4S9 175 aa3.73□□□□□ -1.81
SNX13-210ENST00000494402 MRPL36Q9P0J6 103 aaKnown RBP3.73□□□□□ -1.81
SNX13-210ENST00000494402 A0A0J9YY99 117 aa3.72□□□□□ -1.81
SNX13-210ENST00000494402 ZNF818PQ6ZRF7 136 aa3.72□□□□□ -1.81
SNX13-210ENST00000494402 ADAMTS9Q9P2N4 1935 aa3.72□□□□□ -1.81
SNX13-210ENST00000494402 SETBP1Q9Y6X0 1596 aa3.72□□□□□ -1.81
SNX13-210ENST00000494402 DISP1Q96F81 1524 aa3.71□□□□□ -1.82
SNX13-210ENST00000494402 TRAV23DV6A0A075B6W5 121 aa3.71□□□□□ -1.82
SNX13-210ENST00000494402 A0A1W2PNU3 283 aaPredicted RBP3.71□□□□□ -1.82
SNX13-210ENST00000494402 NUPR2A6NF83 97 aa3.71□□□□□ -1.82
SNX13-210ENST00000494402 ADIRFQ15847 76 aa3.71□□□□□ -1.82
SNX13-210ENST00000494402 SPACA4Q8TDM5 124 aa3.71□□□□□ -1.82
SNX13-210ENST00000494402 PXDNQ92626 1479 aa3.71□□□□□ -1.82
SNX13-210ENST00000494402 PCNX2A6NKB5 2137 aa3.71□□□□□ -1.82
SNX13-210ENST00000494402 MUC22E2RYF6 1773 aaPredicted RBP3.71□□□□□ -1.82
SNX13-210ENST00000494402 PLXNA4Q9HCM2 1894 aa3.71□□□□□ -1.82
SNX13-210ENST00000494402 CHD1O14646 1710 aa3.7□□□□□ -1.82
SNX13-210ENST00000494402 PTPRFP10586 1907 aa3.7□□□□□ -1.82
SNX13-210ENST00000494402 MICAL3Q7RTP6 2002 aa3.7□□□□□ -1.82
SNX13-210ENST00000494402 A0A1W2PNN7 141 aa3.7□□□□□ -1.82
SNX13-210ENST00000494402 A8MU10 97 aa3.7□□□□□ -1.82
SNX13-210ENST00000494402 NINQ8N4C6 2090 aa3.7□□□□□ -1.82
SNX13-210ENST00000494402 CACNA1GO43497 2377 aa3.7□□□□□ -1.82
SNX13-210ENST00000494402 SHROOM2Q13796 1616 aa3.7□□□□□ -1.82
SNX13-210ENST00000494402 PPLO60437 1756 aa3.69□□□□□ -1.82
SNX13-210ENST00000494402 COL4A5P29400 1685 aa3.69□□□□□ -1.82
SNX13-210ENST00000494402 CCDC88BA6NC98 1476 aa3.69□□□□□ -1.82
SNX13-210ENST00000494402 IGKV2-24A0A0C4DH68 120 aa3.69□□□□□ -1.82
SNX13-210ENST00000494402 SNRNP200O75643 2136 aaKnown RBP3.69□□□□□ -1.82
SNX13-210ENST00000494402 LINC00315P59091 139 aa3.69□□□□□ -1.82
SNX13-210ENST00000494402 ODF3Q96PU9 254 aa3.69□□□□□ -1.82
SNX13-210ENST00000494402 ST20Q9HBF5 79 aa3.69□□□□□ -1.82
SNX13-210ENST00000494402 MON2Q7Z3U7 1717 aa3.69□□□□□ -1.82
SNX13-210ENST00000494402 MYH8P13535 1937 aa3.68□□□□□ -1.82
SNX13-210ENST00000494402 RP1P56715 2156 aa3.68□□□□□ -1.82
SNX13-210ENST00000494402 SYS1-DBNDD2H3BUS1 97 aa3.68□□□□□ -1.82
SNX13-210ENST00000494402 SMCO4Q9NRQ5 59 aa3.68□□□□□ -1.82
SNX13-210ENST00000494402 TRBV6-4A0A1B0GX49 114 aa3.67□□□□□ -1.82
SNX13-210ENST00000494402 H3BRN7 92 aa3.67□□□□□ -1.82
SNX13-210ENST00000494402 IGHV3-30P01768 117 aa3.67□□□□□ -1.82
SNX13-210ENST00000494402 APOC3P02656 99 aa3.67□□□□□ -1.82
SNX13-210ENST00000494402 IGHV3-30-5P0DP03 117 aa3.67□□□□□ -1.82
SNX13-210ENST00000494402 C10orf128Q5T292 105 aa3.67□□□□□ -1.82
SNX13-210ENST00000494402 TVP23CQ96ET8 276 aa3.67□□□□□ -1.82
SNX13-210ENST00000494402 FAM167A-AS1Q96KT0 104 aa3.67□□□□□ -1.82
SNX13-210ENST00000494402 REG4Q9BYZ8 158 aa3.67□□□□□ -1.82
SNX13-210ENST00000494402 NXT2Q9NPJ8 142 aaKnown RBP3.67□□□□□ -1.82
SNX13-210ENST00000494402 MANBALQ9NQG1 85 aa3.67□□□□□ -1.82
SNX13-210ENST00000494402 SPCS1Q9Y6A9 102 aa3.67□□□□□ -1.82
SNX13-210ENST00000494402 RGPD4Q7Z3J3 1758 aa3.66□□□□□ -1.82
SNX13-210ENST00000494402 PATJQ8NI35 1801 aa3.66□□□□□ -1.82
SNX13-210ENST00000494402 TRBV7-3A0A075B6L6 115 aa3.66□□□□□ -1.82
SNX13-210ENST00000494402 SDHAF1A6NFY7 115 aa3.66□□□□□ -1.82
SNX13-210ENST00000494402 UBE2D1P51668 147 aa3.66□□□□□ -1.82
SNX13-210ENST00000494402 CYYR1Q96J86 154 aa3.66□□□□□ -1.82
SNX13-210ENST00000494402 LIMD2Q9BT23 127 aa3.66□□□□□ -1.82
SNX13-210ENST00000494402 NWD2Q9ULI1 1742 aa3.66□□□□□ -1.82
SNX13-210ENST00000494402 SHANK2Q9UPX8 1470 aa3.66□□□□□ -1.82
SNX13-210ENST00000494402 IGKV3-7A0A075B6H7 116 aa3.65□□□□□ -1.83
SNX13-210ENST00000494402 C10orf55Q5SWW7 151 aa3.65□□□□□ -1.83
SNX13-210ENST00000494402 CYP2G1PQ6ZSU1 146 aa3.65□□□□□ -1.83
SNX13-210ENST00000494402 KLK9Q9UKQ9 250 aa3.65□□□□□ -1.83
SNX13-210ENST00000494402 NUMA1Q14980 2115 aa3.65□□□□□ -1.83
SNX13-210ENST00000494402 EPRSP07814 1512 aaKnown RBP3.65□□□□□ -1.83
SNX13-210ENST00000494402 PPYP01298 95 aa3.64□□□□□ -1.83
SNX13-210ENST00000494402 DEFA5Q01523 94 aa3.64□□□□□ -1.83
SNX13-210ENST00000494402 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms