RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 PQLC2Q6ZP29 291 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 Q6ZRU5 148 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 NDFIP1Q9BT67 221 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 NMES1Q9C002 83 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 RBM38Q9H0Z9 239 aaKnown RBP5.29□□□□□ -1.56
USP39-216ENST00000490193 NUDT15Q9NV35 164 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 Q9UF83 564 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 RPH3ALQ9UNE2 315 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 URGCP-MRPS24S4R325 110 aa5.29□□□□□ -1.56
USP39-216ENST00000490193 Q0VG73 95 aa5.28□□□□□ -1.56
USP39-216ENST00000490193 ELOBQ15370 118 aa5.28□□□□□ -1.56
USP39-216ENST00000490193 FFAR4Q5NUL3 377 aa5.28□□□□□ -1.56
USP39-216ENST00000490193 UBE2WQ96B02 151 aa5.28□□□□□ -1.56
USP39-216ENST00000490193 KLK12Q9UKR0 248 aa5.28□□□□□ -1.56
USP39-216ENST00000490193 CCDC160A6NGH7 325 aa5.27□□□□□ -1.57
USP39-216ENST00000490193 H0YIZ8 118 aa5.27□□□□□ -1.57
USP39-216ENST00000490193 GCGP01275 180 aa5.27□□□□□ -1.57
USP39-216ENST00000490193 GNG5P63218 68 aa5.27□□□□□ -1.57
USP39-216ENST00000490193 S100A12P80511 92 aa5.27□□□□□ -1.57
USP39-216ENST00000490193 DGAT2L7PQ6IED9 249 aa5.27□□□□□ -1.57
USP39-216ENST00000490193 C14orf178Q8N769 122 aaPredicted RBP5.27□□□□□ -1.57
USP39-216ENST00000490193 TMEM75Q8N9X5 138 aa5.27□□□□□ -1.57
USP39-216ENST00000490193 SAMD10Q9BYL1 202 aa5.27□□□□□ -1.57
USP39-216ENST00000490193 OR5AC2Q9NZP5 309 aa5.27□□□□□ -1.57
USP39-216ENST00000490193 A0A087WX48 190 aa5.26□□□□□ -1.57
USP39-216ENST00000490193 XKRY2A2RUG3 117 aa5.26□□□□□ -1.57
USP39-216ENST00000490193 RHODO00212 210 aa5.26□□□□□ -1.57
USP39-216ENST00000490193 TCRAP04437 139 aa5.26□□□□□ -1.57
USP39-216ENST00000490193 C9orf163Q8N9P6 203 aa5.26□□□□□ -1.57
USP39-216ENST00000490193 C5orf17Q8NAS9 161 aa5.26□□□□□ -1.57
USP39-216ENST00000490193 OR10G7Q8NGN6 311 aa5.26□□□□□ -1.57
USP39-216ENST00000490193 OR2T35Q8NGX2 323 aa5.26□□□□□ -1.57
USP39-216ENST00000490193 C1orf43Q9BWL3 253 aa5.26□□□□□ -1.57
USP39-216ENST00000490193 IL36BQ9NZH7 164 aa5.26□□□□□ -1.57
USP39-216ENST00000490193 PSG8Q9UQ74 426 aa5.26□□□□□ -1.57
USP39-216ENST00000490193 IGKV3D-20A0A0C4DH25 116 aa5.25□□□□□ -1.57
USP39-216ENST00000490193 A0A1B0GVG6 124 aa5.25□□□□□ -1.57
USP39-216ENST00000490193 K7EQM0 130 aa5.25□□□□□ -1.57
USP39-216ENST00000490193 EIF3GO75821 320 aaKnown RBP eCLIP5.25□□□□□ -1.57
USP39-216ENST00000490193 LINC00310P59036 64 aa5.25□□□□□ -1.57
USP39-216ENST00000490193 CIRBPQ14011 172 aaKnown RBP5.25□□□□□ -1.57
USP39-216ENST00000490193 LGALSLQ3ZCW2 172 aaPredicted RBP5.25□□□□□ -1.57
USP39-216ENST00000490193 ZFP69Q49AA0 526 aa5.25□□□□□ -1.57
USP39-216ENST00000490193 ENHOQ6UWT2 76 aa5.25□□□□□ -1.57
USP39-216ENST00000490193 SGK494Q96LW2 274 aa5.25□□□□□ -1.57
USP39-216ENST00000490193 JPT2Q9H910 190 aa5.25□□□□□ -1.57
USP39-216ENST00000490193 HSPB11Q9Y547 144 aa5.25□□□□□ -1.57
USP39-216ENST00000490193 A0A0D9SG52 128 aa5.24□□□□□ -1.57
USP39-216ENST00000490193 TRBV10-1A0A0K0K1A3 114 aa5.24□□□□□ -1.57
USP39-216ENST00000490193 A0A1W2PPV4 95 aa5.24□□□□□ -1.57
USP39-216ENST00000490193 USP17L23D6RBM5 183 aa5.24□□□□□ -1.57
USP39-216ENST00000490193 PANO1I0J062 215 aa5.24□□□□□ -1.57
USP39-216ENST00000490193 PFDN1O60925 122 aa5.24□□□□□ -1.57
USP39-216ENST00000490193 PRSS1P07477 247 aa5.24□□□□□ -1.57
USP39-216ENST00000490193 S100A4P26447 101 aaKnown RBP5.24□□□□□ -1.57
USP39-216ENST00000490193 RAB14P61106 215 aa5.24□□□□□ -1.57
USP39-216ENST00000490193 RPL19P84098 196 aaKnown RBP5.24□□□□□ -1.57
USP39-216ENST00000490193 CYCSP99999 105 aaKnown RBP5.24□□□□□ -1.57
USP39-216ENST00000490193 FLI1Q01543 452 aaPredicted RBP5.24□□□□□ -1.57
USP39-216ENST00000490193 SAPCD1Q5SSQ6 148 aa5.24□□□□□ -1.57
USP39-216ENST00000490193 DNLZQ5SXM8 178 aa5.24□□□□□ -1.57
USP39-216ENST00000490193 KCNIP4Q6PIL6 250 aa5.24□□□□□ -1.57
USP39-216ENST00000490193 SDIM1Q6ZPB5 146 aa5.24□□□□□ -1.57
USP39-216ENST00000490193 OR2G3Q8NGZ4 309 aa5.24□□□□□ -1.57
USP39-216ENST00000490193 SCGB1C1Q8TD33 95 aa5.24□□□□□ -1.57
USP39-216ENST00000490193 FAM240BA0A1B0GVZ2 78 aa5.23□□□□□ -1.57
USP39-216ENST00000490193 SIX6O95475 246 aa5.23□□□□□ -1.57
USP39-216ENST00000490193 ARL14EPLP0DKL9 152 aa5.23□□□□□ -1.57
USP39-216ENST00000490193 ASIPP42127 132 aa5.23□□□□□ -1.57
USP39-216ENST00000490193 UBE2D3P61077 147 aa5.23□□□□□ -1.57
USP39-216ENST00000490193 UBE2D2P62837 147 aa5.23□□□□□ -1.57
USP39-216ENST00000490193 MIAQ16674 131 aa5.23□□□□□ -1.57
USP39-216ENST00000490193 LRRC37A5PQ49AS3 106 aa5.23□□□□□ -1.57
USP39-216ENST00000490193 ZC2HC1AQ96GY0 325 aa5.23□□□□□ -1.57
USP39-216ENST00000490193 TRBV7-3A0A075B6L6 115 aa5.22□□□□□ -1.57
USP39-216ENST00000490193 TRBV6-8A0A0A6YYG3 113 aa5.22□□□□□ -1.57
USP39-216ENST00000490193 FABP5P3A8MUU1 101 aa5.22□□□□□ -1.57
USP39-216ENST00000490193 CRPP02741 224 aa5.22□□□□□ -1.57
USP39-216ENST00000490193 STAG3L2P0CL84 134 aa5.22□□□□□ -1.57
USP39-216ENST00000490193 STAG3L3P0CL85 134 aa5.22□□□□□ -1.57
USP39-216ENST00000490193 RAB2AP61019 212 aa5.22□□□□□ -1.57
USP39-216ENST00000490193 RPL36AP83881 106 aaKnown RBP5.22□□□□□ -1.57
USP39-216ENST00000490193 KRTAP26-1Q6PEX3 210 aa5.22□□□□□ -1.57
USP39-216ENST00000490193 PRNTQ86SH4 94 aa5.22□□□□□ -1.57
USP39-216ENST00000490193 HSD17B11Q8NBQ5 300 aa5.22□□□□□ -1.57
USP39-216ENST00000490193 OR10G8Q8NGN5 311 aa5.22□□□□□ -1.57
USP39-216ENST00000490193 PPP1R1CQ8WVI7 109 aa5.22□□□□□ -1.57
USP39-216ENST00000490193 RPL36ALQ969Q0 106 aaKnown RBP5.22□□□□□ -1.57
USP39-216ENST00000490193 RNF185Q96GF1 192 aa5.22□□□□□ -1.57
USP39-216ENST00000490193 SFRP2Q96HF1 295 aa5.22□□□□□ -1.57
USP39-216ENST00000490193 CCDC32Q9BV29 185 aa5.22□□□□□ -1.57
USP39-216ENST00000490193 PRR34Q9NV39 138 aa5.22□□□□□ -1.57
USP39-216ENST00000490193 EPDR1Q9UM22 224 aa5.22□□□□□ -1.57
USP39-216ENST00000490193 A4D1N5 150 aa5.21□□□□□ -1.58
USP39-216ENST00000490193 H3BVH4 76 aa5.21□□□□□ -1.58
USP39-216ENST00000490193 HMGB3O15347 200 aaKnown RBP5.21□□□□□ -1.58
USP39-216ENST00000490193 GATCO43716 136 aaKnown RBP5.21□□□□□ -1.58
USP39-216ENST00000490193 HLA-DQA1P01909 254 aa5.21□□□□□ -1.58
USP39-216ENST00000490193 ARMS2P0C7Q2 107 aa5.21□□□□□ -1.58
USP39-216ENST00000490193 PET100P0DJ07 73 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms