RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 LOC100131303A0A0U1RQF7 123 aa14.43□□□□□ -0.1
SEC13-217ENST00000482647 MUC21A0A140T8X8 626 aa14.43□□□□□ -0.1
SEC13-217ENST00000482647 M0R2N4 97 aa14.43□□□□□ -0.1
SEC13-217ENST00000482647 CRYGDP07320 174 aa14.43□□□□□ -0.1
SEC13-217ENST00000482647 IGLC6P0CF74 106 aa14.43□□□□□ -0.1
SEC13-217ENST00000482647 FAM74A3Q4VXF1 159 aa14.43□□□□□ -0.1
SEC13-217ENST00000482647 Q6ZSN1 163 aa14.43□□□□□ -0.1
SEC13-217ENST00000482647 UPK3BQ9BT76 320 aa14.43□□□□□ -0.1
SEC13-217ENST00000482647 Q9H8V8 135 aa14.43□□□□□ -0.1
SEC13-217ENST00000482647 A0A1W2PPQ1 181 aa14.42□□□□□ -0.1
SEC13-217ENST00000482647 F2Z2F3 143 aa14.42□□□□□ -0.1
SEC13-217ENST00000482647 SSTP61278 116 aa14.42□□□□□ -0.1
SEC13-217ENST00000482647 NACAE9PAV3 2078 aa14.42□□□□□ -0.1
SEC13-217ENST00000482647 C9JQL5 133 aa14.41□□□□□ -0.1
SEC13-217ENST00000482647 ERVFC1-1P60608 527 aa14.41□□□□□ -0.1
SEC13-217ENST00000482647 SRSF3P84103 164 aaKnown RBP14.41□□□□□ -0.1
SEC13-217ENST00000482647 FAM231DQ6ZW35 169 aa14.41□□□□□ -0.1
SEC13-217ENST00000482647 LINC01551Q86U37 167 aa14.41□□□□□ -0.1
SEC13-217ENST00000482647 CACNG7P62955 275 aa14.4□□□□□ -0.1
SEC13-217ENST00000482647 TMEM241Q24JQ0 296 aa14.4□□□□□ -0.1
SEC13-217ENST00000482647 GATCO43716 136 aaKnown RBP14.39□□□□□ -0.11
SEC13-217ENST00000482647 LYZL1Q6UWQ5 148 aa14.39□□□□□ -0.11
SEC13-217ENST00000482647 Q6ZR54 194 aa14.39□□□□□ -0.11
SEC13-217ENST00000482647 DNAH10Q8IVF4 4471 aa14.38□□□□□ -0.11
SEC13-217ENST00000482647 NBDYA0A0U1RRE5 68 aa14.38□□□□□ -0.11
SEC13-217ENST00000482647 SMIM17P0DL12 118 aa14.38□□□□□ -0.11
SEC13-217ENST00000482647 C14orf178Q8N769 122 aaPredicted RBP14.38□□□□□ -0.11
SEC13-217ENST00000482647 TIRAPP58753 221 aa14.37□□□□□ -0.11
SEC13-217ENST00000482647 WDR73Q6P4I2 378 aa14.37□□□□□ -0.11
SEC13-217ENST00000482647 AP1S3Q96PC3 154 aa14.37□□□□□ -0.11
SEC13-217ENST00000482647 A8MWL6 223 aa14.36□□□□□ -0.11
SEC13-217ENST00000482647 RAB4BP61018 213 aa14.36□□□□□ -0.11
SEC13-217ENST00000482647 SOHLH1Q5JUK2 328 aa14.36□□□□□ -0.11
SEC13-217ENST00000482647 DNAH2Q9P225 4427 aa14.35□□□□□ -0.11
SEC13-217ENST00000482647 GAGE12JA6NER3 117 aa14.35□□□□□ -0.11
SEC13-217ENST00000482647 CTRLP40313 264 aa14.35□□□□□ -0.11
SEC13-217ENST00000482647 GAGE1Q13065 139 aa14.35□□□□□ -0.11
SEC13-217ENST00000482647 GAGE4Q13068 117 aa14.35□□□□□ -0.11
SEC13-217ENST00000482647 GAGE5Q13069 117 aa14.35□□□□□ -0.11
SEC13-217ENST00000482647 GAGE13Q4V321 117 aa14.35□□□□□ -0.11
SEC13-217ENST00000482647 CT83Q5H943 113 aa14.35□□□□□ -0.11
SEC13-217ENST00000482647 CLLU1Q5K131 121 aa14.35□□□□□ -0.11
SEC13-217ENST00000482647 ATP6V0E2Q8NHE4 81 aa14.35□□□□□ -0.11
SEC13-217ENST00000482647 MSRB1Q9NZV6 116 aa14.35□□□□□ -0.11
SEC13-217ENST00000482647 NAT8Q9UHE5 227 aa14.35□□□□□ -0.11
SEC13-217ENST00000482647 TRBV10-1A0A0K0K1A3 114 aa14.34□□□□□ -0.11
SEC13-217ENST00000482647 F5H697 171 aa14.34□□□□□ -0.11
SEC13-217ENST00000482647 SIVA1O15304 175 aa14.34□□□□□ -0.11
SEC13-217ENST00000482647 ZNF56Q15929 161 aa14.34□□□□□ -0.11
SEC13-217ENST00000482647 TTC32Q5I0X7 151 aa14.34□□□□□ -0.11
SEC13-217ENST00000482647 C15orf54Q8N8G6 183 aa14.34□□□□□ -0.11
SEC13-217ENST00000482647 GTSF1Q8WW33 167 aa14.34□□□□□ -0.11
SEC13-217ENST00000482647 OSTCQ9NRP0 149 aa14.34□□□□□ -0.11
SEC13-217ENST00000482647 EPPK1P58107 5090 aaKnown RBP14.33□□□□□ -0.12
SEC13-217ENST00000482647 NTF3P20783 257 aa14.33□□□□□ -0.12
SEC13-217ENST00000482647 RPL23P62829 140 aaKnown RBP14.33□□□□□ -0.12
SEC13-217ENST00000482647 IFITM2Q01629 132 aa14.33□□□□□ -0.12
SEC13-217ENST00000482647 CNFNQ9BYD5 112 aa14.33□□□□□ -0.12
SEC13-217ENST00000482647 GTSF1LQ9H1H1 148 aa14.33□□□□□ -0.12
SEC13-217ENST00000482647 Q9UF83 564 aa14.33□□□□□ -0.12
SEC13-217ENST00000482647 KIF25-AS1Q9Y6Z4 181 aa14.33□□□□□ -0.12
SEC13-217ENST00000482647 TRGC1P0CF51 173 aa14.32□□□□□ -0.12
SEC13-217ENST00000482647 TWIST1Q15672 202 aa14.32□□□□□ -0.12
SEC13-217ENST00000482647 C1orf134Q5TEV5 83 aa14.32□□□□□ -0.12
SEC13-217ENST00000482647 ISOC2Q96AB3 205 aa14.32□□□□□ -0.12
SEC13-217ENST00000482647 LINC00694P0DN24 101 aa14.31□□□□□ -0.12
SEC13-217ENST00000482647 ADIRFQ15847 76 aa14.31□□□□□ -0.12
SEC13-217ENST00000482647 FOXA3P55318 350 aaPredicted RBP14.3□□□□□ -0.12
SEC13-217ENST00000482647 LINC00315P59091 139 aa14.3□□□□□ -0.12
SEC13-217ENST00000482647 RPL36AP83881 106 aaKnown RBP14.3□□□□□ -0.12
SEC13-217ENST00000482647 TSKUQ8WUA8 353 aa14.3□□□□□ -0.12
SEC13-217ENST00000482647 RPL36ALQ969Q0 106 aaKnown RBP14.3□□□□□ -0.12
SEC13-217ENST00000482647 GFRA4Q9GZZ7 299 aa14.3□□□□□ -0.12
SEC13-217ENST00000482647 TRAV9-2A0A087WT02 112 aa14.29□□□□□ -0.12
SEC13-217ENST00000482647 TRAV8-6A0A0B4J262 113 aa14.29□□□□□ -0.12
SEC13-217ENST00000482647 FAM231BA6NCW3 169 aa14.29□□□□□ -0.12
SEC13-217ENST00000482647 EVI2AP22794 236 aa14.29□□□□□ -0.12
SEC13-217ENST00000482647 LELP1Q5T871 98 aa14.29□□□□□ -0.12
SEC13-217ENST00000482647 LINC00336Q6ZUF6 198 aa14.29□□□□□ -0.12
SEC13-217ENST00000482647 PGLYRP4Q96LB8 373 aa14.29□□□□□ -0.12
SEC13-217ENST00000482647 TRBV7-3A0A075B6L6 115 aa14.28□□□□□ -0.12
SEC13-217ENST00000482647 MGPP08493 103 aa14.28□□□□□ -0.12
SEC13-217ENST00000482647 OR10J3Q5JRS4 329 aa14.28□□□□□ -0.12
SEC13-217ENST00000482647 WFDC10BQ8IUB3 73 aa14.28□□□□□ -0.12
SEC13-217ENST00000482647 OR10G8Q8NGN5 311 aa14.28□□□□□ -0.12
SEC13-217ENST00000482647 BORCS7Q96B45 105 aa14.28□□□□□ -0.12
SEC13-217ENST00000482647 DPH3P1Q9H4G8 78 aa14.28□□□□□ -0.12
SEC13-217ENST00000482647 FRAS1Q86XX4 4008 aa14.27□□□□□ -0.12
SEC13-217ENST00000482647 A0A087WWC5 75 aa14.27□□□□□ -0.13
SEC13-217ENST00000482647 RTL8CO15255 209 aa14.27□□□□□ -0.13
SEC13-217ENST00000482647 SMIM15Q7Z3B0 74 aa14.27□□□□□ -0.13
SEC13-217ENST00000482647 C6orf223Q8N319 242 aa14.27□□□□□ -0.13
SEC13-217ENST00000482647 V9GYV3 84 aa14.27□□□□□ -0.13
SEC13-217ENST00000482647 HIGD1CA8MV81 97 aa14.26□□□□□ -0.13
SEC13-217ENST00000482647 K7EP13 123 aa14.26□□□□□ -0.13
SEC13-217ENST00000482647 DNAH10OSP0CZ25 163 aa14.26□□□□□ -0.13
SEC13-217ENST00000482647 UBE2D3P61077 147 aa14.26□□□□□ -0.13
SEC13-217ENST00000482647 UBE2D2P62837 147 aa14.26□□□□□ -0.13
SEC13-217ENST00000482647 KRTAP1-5Q9BYS1 174 aa14.26□□□□□ -0.13
SEC13-217ENST00000482647 IGHV3-38A0A0C4DH36 116 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms