RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 MT-ND4LP03901 98 aa-0.14□□□□□ -2.43
ECHDC1-213ENST00000474240 SCTP09683 121 aa-0.14□□□□□ -2.43
ECHDC1-213ENST00000474240 NCS1P62166 190 aa-0.14□□□□□ -2.43
ECHDC1-213ENST00000474240 RPL7L1Q6DKI1 246 aaKnown RBP-0.14□□□□□ -2.43
ECHDC1-213ENST00000474240 ATP11AUNQ6ZP68 121 aa-0.14□□□□□ -2.43
ECHDC1-213ENST00000474240 UBE2DNLQ8IWF7 75 aa-0.14□□□□□ -2.43
ECHDC1-213ENST00000474240 IFI27L1Q96BM0 104 aa-0.14□□□□□ -2.43
ECHDC1-213ENST00000474240 ABCA1O95477 2261 aa-0.14□□□□□ -2.43
ECHDC1-213ENST00000474240 PLXNA2O75051 1894 aa-0.15□□□□□ -2.43
ECHDC1-213ENST00000474240 TMEM14DPA8MWL7 114 aa-0.15□□□□□ -2.43
ECHDC1-213ENST00000474240 TMEM244Q5VVB8 128 aa-0.15□□□□□ -2.43
ECHDC1-213ENST00000474240 C20orf197Q8N268 126 aa-0.15□□□□□ -2.43
ECHDC1-213ENST00000474240 MMGT1Q8N4V1 131 aa-0.15□□□□□ -2.43
ECHDC1-213ENST00000474240 BATF3Q9NR55 127 aa-0.15□□□□□ -2.43
ECHDC1-213ENST00000474240 DNAJC15Q9Y5T4 150 aa-0.15□□□□□ -2.43
ECHDC1-213ENST00000474240 POLQO75417 2590 aa-0.15□□□□□ -2.43
ECHDC1-213ENST00000474240 A0A0D9SFI3 127 aa-0.16□□□□□ -2.44
ECHDC1-213ENST00000474240 A6NIN4 97 aa-0.16□□□□□ -2.44
ECHDC1-213ENST00000474240 UNC79Q9P2D8 2635 aa-0.17□□□□□ -2.44
ECHDC1-213ENST00000474240 TRAV12-3A0A0B4J271 114 aa-0.17□□□□□ -2.44
ECHDC1-213ENST00000474240 GNG14A0A1W2PPG7 69 aa-0.17□□□□□ -2.44
ECHDC1-213ENST00000474240 M0R2P5 195 aa-0.17□□□□□ -2.44
ECHDC1-213ENST00000474240 TNFSF15O95150 251 aa-0.17□□□□□ -2.44
ECHDC1-213ENST00000474240 Q6ZRX8 168 aa-0.17□□□□□ -2.44
ECHDC1-213ENST00000474240 AIF1LQ9BQI0 150 aa-0.17□□□□□ -2.44
ECHDC1-213ENST00000474240 SAR1AQ9NR31 198 aa-0.17□□□□□ -2.44
ECHDC1-213ENST00000474240 HIGD1AQ9Y241 93 aa-0.17□□□□□ -2.44
ECHDC1-213ENST00000474240 CADP27708 2225 aa-0.17□□□□□ -2.44
ECHDC1-213ENST00000474240 AHCTF1Q8WYP5 2266 aa-0.17□□□□□ -2.44
ECHDC1-213ENST00000474240 KIF13AQ9H1H9 1805 aa-0.17□□□□□ -2.44
ECHDC1-213ENST00000474240 MED13LQ71F56 2210 aa-0.18□□□□□ -2.44
ECHDC1-213ENST00000474240 IFNA17P01571 189 aa-0.18□□□□□ -2.44
ECHDC1-213ENST00000474240 INSL4Q14641 139 aa-0.18□□□□□ -2.44
ECHDC1-213ENST00000474240 SPANXN1Q5VSR9 72 aa-0.18□□□□□ -2.44
ECHDC1-213ENST00000474240 F5P12259 2224 aa-0.19□□□□□ -2.44
ECHDC1-213ENST00000474240 RPRMQ9NS64 109 aa-0.19□□□□□ -2.44
ECHDC1-213ENST00000474240 F8P00451 2351 aa-0.2□□□□□ -2.44
ECHDC1-213ENST00000474240 PIN1P1O15428 100 aa-0.2□□□□□ -2.44
ECHDC1-213ENST00000474240 SPINK8P0C7L1 97 aa-0.2□□□□□ -2.44
ECHDC1-213ENST00000474240 VSTM2AQ8TAG5 236 aa-0.2□□□□□ -2.44
ECHDC1-213ENST00000474240 CNFNQ9BYD5 112 aa-0.2□□□□□ -2.44
ECHDC1-213ENST00000474240 PRO0255Q9UI72 69 aa-0.2□□□□□ -2.44
ECHDC1-213ENST00000474240 CASZ1Q86V15 1759 aa-0.2□□□□□ -2.44
ECHDC1-213ENST00000474240 XIRP1Q702N8 1843 aaKnown RBP-0.2□□□□□ -2.44
ECHDC1-213ENST00000474240 PLXNA1Q9UIW2 1896 aa-0.2□□□□□ -2.44
ECHDC1-213ENST00000474240 NRXN2Q9P2S2 1712 aa-0.21□□□□□ -2.44
ECHDC1-213ENST00000474240 PTPRMP28827 1452 aa-0.21□□□□□ -2.44
ECHDC1-213ENST00000474240 CELSR2Q9HCU4 2923 aa-0.21□□□□□ -2.44
ECHDC1-213ENST00000474240 TRBV20-1A0A075B6N2 111 aa-0.21□□□□□ -2.44
ECHDC1-213ENST00000474240 A0A087WTM6 91 aa-0.21□□□□□ -2.44
ECHDC1-213ENST00000474240 H0YJX3 145 aa-0.21□□□□□ -2.44
ECHDC1-213ENST00000474240 J3QR89 54 aa-0.21□□□□□ -2.44
ECHDC1-213ENST00000474240 NPC2P61916 151 aa-0.21□□□□□ -2.44
ECHDC1-213ENST00000474240 PSMG3Q9BT73 122 aaPredicted RBP-0.21□□□□□ -2.44
ECHDC1-213ENST00000474240 SSC5DA1L4H1 1573 aa-0.21□□□□□ -2.44
ECHDC1-213ENST00000474240 UBR5O95071 2799 aaPredicted RBP-0.22□□□□□ -2.44
ECHDC1-213ENST00000474240 ABCA4P78363 2273 aa-0.22□□□□□ -2.44
ECHDC1-213ENST00000474240 NHSL1Q5SYE7 1610 aa-0.22□□□□□ -2.44
ECHDC1-213ENST00000474240 TRGV1A0A0A0MS02 117 aa-0.22□□□□□ -2.44
ECHDC1-213ENST00000474240 FAM92AA1XBS5 289 aa-0.22□□□□□ -2.44
ECHDC1-213ENST00000474240 ZNF815PA8K554 130 aa-0.22□□□□□ -2.44
ECHDC1-213ENST00000474240 M0R3E3 92 aa-0.22□□□□□ -2.44
ECHDC1-213ENST00000474240 PIPP12273 146 aaPredicted RBP-0.22□□□□□ -2.44
ECHDC1-213ENST00000474240 S100A3P33764 101 aa-0.22□□□□□ -2.44
ECHDC1-213ENST00000474240 EDDM3BP56851 147 aa-0.22□□□□□ -2.44
ECHDC1-213ENST00000474240 CYP4F30PQ9H0H9 118 aa-0.22□□□□□ -2.44
ECHDC1-213ENST00000474240 LSM2Q9Y333 95 aaKnown RBP-0.22□□□□□ -2.44
ECHDC1-213ENST00000474240 PARP14Q460N5 1801 aa-0.22□□□□□ -2.45
ECHDC1-213ENST00000474240 DAPK1P53355 1430 aa-0.22□□□□□ -2.45
ECHDC1-213ENST00000474240 ERCC6Q03468 1493 aa-0.22□□□□□ -2.45
ECHDC1-213ENST00000474240 WNK2Q9Y3S1 2297 aa-0.23□□□□□ -2.45
ECHDC1-213ENST00000474240 TRBV10-3A0A0K0K1G6 114 aa-0.23□□□□□ -2.45
ECHDC1-213ENST00000474240 MORN2Q502X0 79 aa-0.23□□□□□ -2.45
ECHDC1-213ENST00000474240 LINC01545Q5VT33 79 aa-0.23□□□□□ -2.45
ECHDC1-213ENST00000474240 SSBP3-AS1Q7Z2R9 100 aa-0.23□□□□□ -2.45
ECHDC1-213ENST00000474240 Q96NJ1 140 aa-0.23□□□□□ -2.45
ECHDC1-213ENST00000474240 GSKIPQ9P0R6 139 aa-0.23□□□□□ -2.45
ECHDC1-213ENST00000474240 NDUFA12Q9UI09 145 aa-0.23□□□□□ -2.45
ECHDC1-213ENST00000474240 PHIPQ8WWQ0 1821 aa-0.23□□□□□ -2.45
ECHDC1-213ENST00000474240 ABCA2Q9BZC7 2435 aa-0.23□□□□□ -2.45
ECHDC1-213ENST00000474240 ARAP1Q96P48 1450 aa-0.23□□□□□ -2.45
ECHDC1-213ENST00000474240 TRAV1-2A0A0B4J238 106 aa-0.24□□□□□ -2.45
ECHDC1-213ENST00000474240 TRAV22A0A0B4J277 110 aa-0.24□□□□□ -2.45
ECHDC1-213ENST00000474240 APOC4-APOC2K7ER74 178 aa-0.24□□□□□ -2.45
ECHDC1-213ENST00000474240 NPFFO15130 113 aa-0.24□□□□□ -2.45
ECHDC1-213ENST00000474240 DEFB109BQ30KR1 87 aa-0.24□□□□□ -2.45
ECHDC1-213ENST00000474240 OVOS2A0A0J9YW53 1432 aa-0.24□□□□□ -2.45
ECHDC1-213ENST00000474240 OVOS2Q6IE36 1432 aa-0.24□□□□□ -2.45
ECHDC1-213ENST00000474240 BIVM-ERCC5R4GMW8 1640 aa-0.24□□□□□ -2.45
ECHDC1-213ENST00000474240 PCLOQ9Y6V0 5065 aa-0.25□□□□□ -2.45
ECHDC1-213ENST00000474240 TENM4Q6N022 2769 aa-0.25□□□□□ -2.45
ECHDC1-213ENST00000474240 WFDC2Q14508 124 aa-0.25□□□□□ -2.45
ECHDC1-213ENST00000474240 LZICQ8WZA0 190 aa-0.25□□□□□ -2.45
ECHDC1-213ENST00000474240 FLNCQ14315 2725 aa-0.25□□□□□ -2.45
ECHDC1-213ENST00000474240 MYH9P35579 1960 aaKnown RBP-0.26□□□□□ -2.45
ECHDC1-213ENST00000474240 DISP2A7MBM2 1401 aa-0.26□□□□□ -2.45
ECHDC1-213ENST00000474240 ZNF609O15014 1411 aa-0.26□□□□□ -2.45
ECHDC1-213ENST00000474240 NBEAP1P0C6P0 100 aa-0.26□□□□□ -2.45
ECHDC1-213ENST00000474240 PIRTP0C851 137 aa-0.26□□□□□ -2.45
ECHDC1-213ENST00000474240 SCGB1A1P11684 91 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms