RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 LRP5O75197 1615 aa-1.31□□□□□ -2.62
COMMD3-209ENST00000471350 HIVEP1P15822 2718 aa-1.31□□□□□ -2.62
COMMD3-209ENST00000471350 C10orf71Q711Q0 1435 aa-1.32□□□□□ -2.62
COMMD3-209ENST00000471350 EPG5Q9HCE0 2579 aa-1.32□□□□□ -2.62
COMMD3-209ENST00000471350 CCDC171Q6TFL3 1326 aa-1.32□□□□□ -2.62
COMMD3-209ENST00000471350 HYDINQ4G0P3 5121 aa-1.32□□□□□ -2.62
COMMD3-209ENST00000471350 TRBV7-6A0A0J9YX20 115 aa-1.32□□□□□ -2.62
COMMD3-209ENST00000471350 LOC107984640A0A0U1RRK4 108 aa-1.32□□□□□ -2.62
COMMD3-209ENST00000471350 G3V318 75 aa-1.32□□□□□ -2.62
COMMD3-209ENST00000471350 S100A3P33764 101 aa-1.32□□□□□ -2.62
COMMD3-209ENST00000471350 DCDP81605 110 aaKnown RBP-1.32□□□□□ -2.62
COMMD3-209ENST00000471350 DHRS4L2Q6PKH6 230 aa-1.32□□□□□ -2.62
COMMD3-209ENST00000471350 SLC25A26Q70HW3 274 aa-1.32□□□□□ -2.62
COMMD3-209ENST00000471350 STX19Q8N4C7 294 aa-1.32□□□□□ -2.62
COMMD3-209ENST00000471350 DGCR14Q96DF8 476 aaKnown RBP-1.32□□□□□ -2.62
COMMD3-209ENST00000471350 GOLGA3Q08378 1498 aa-1.32□□□□□ -2.62
COMMD3-209ENST00000471350 USF3Q68DE3 2245 aa-1.32□□□□□ -2.62
COMMD3-209ENST00000471350 URB1O60287 2271 aaKnown RBP-1.33□□□□□ -2.62
COMMD3-209ENST00000471350 DOPEY1Q5JWR5 2465 aa-1.33□□□□□ -2.62
COMMD3-209ENST00000471350 FXYD6-FXYD2A0A087WZ82 144 aa-1.33□□□□□ -2.62
COMMD3-209ENST00000471350 PPP5D1E7EU14 171 aa-1.33□□□□□ -2.62
COMMD3-209ENST00000471350 CTXN2P0C2S0 81 aa-1.33□□□□□ -2.62
COMMD3-209ENST00000471350 TCTAP57738 103 aa-1.33□□□□□ -2.62
COMMD3-209ENST00000471350 IFI27L1Q96BM0 104 aa-1.33□□□□□ -2.62
COMMD3-209ENST00000471350 NDUFAF1Q9Y375 327 aa-1.33□□□□□ -2.62
COMMD3-209ENST00000471350 ARHGAP31Q2M1Z3 1444 aa-1.33□□□□□ -2.62
COMMD3-209ENST00000471350 MYH9P35579 1960 aaKnown RBP-1.34□□□□□ -2.62
COMMD3-209ENST00000471350 RYR1P21817 5038 aa-1.34□□□□□ -2.62
COMMD3-209ENST00000471350 UQCRQO14949 82 aa-1.34□□□□□ -2.62
COMMD3-209ENST00000471350 SPRR2AP35326 72 aa-1.34□□□□□ -2.62
COMMD3-209ENST00000471350 CRYBA4P53673 196 aa-1.34□□□□□ -2.62
COMMD3-209ENST00000471350 MRPS25P82663 173 aaKnown RBP-1.34□□□□□ -2.62
COMMD3-209ENST00000471350 KRTAP6-2Q3LI66 62 aa-1.34□□□□□ -2.62
COMMD3-209ENST00000471350 UFC1Q9Y3C8 167 aa-1.34□□□□□ -2.62
COMMD3-209ENST00000471350 ARAP1Q96P48 1450 aa-1.35□□□□□ -2.63
COMMD3-209ENST00000471350 TRAV1-2A0A0B4J238 106 aa-1.35□□□□□ -2.63
COMMD3-209ENST00000471350 A0A1B0GW64 132 aa-1.35□□□□□ -2.63
COMMD3-209ENST00000471350 PFDN1O60925 122 aa-1.35□□□□□ -2.63
COMMD3-209ENST00000471350 SLC25A6P12236 298 aa-1.35□□□□□ -2.63
COMMD3-209ENST00000471350 HIST1H1BP16401 226 aaKnown RBP-1.35□□□□□ -2.63
COMMD3-209ENST00000471350 GNG3P63215 75 aa-1.35□□□□□ -2.63
COMMD3-209ENST00000471350 PARVGQ9HBI0 331 aa-1.35□□□□□ -2.63
COMMD3-209ENST00000471350 METTL1Q9UBP6 276 aaKnown RBP-1.35□□□□□ -2.63
COMMD3-209ENST00000471350 YTHDC2Q9H6S0 1430 aaKnown RBP-1.35□□□□□ -2.63
COMMD3-209ENST00000471350 TANC2Q9HCD6 1990 aa-1.36□□□□□ -2.63
COMMD3-209ENST00000471350 CAMSAP1Q5T5Y3 1602 aa-1.36□□□□□ -2.63
COMMD3-209ENST00000471350 KIDINS220Q9ULH0 1771 aa-1.36□□□□□ -2.63
COMMD3-209ENST00000471350 CCDC179H3BU77 68 aa-1.36□□□□□ -2.63
COMMD3-209ENST00000471350 M0QZK8 103 aa-1.36□□□□□ -2.63
COMMD3-209ENST00000471350 ZNF609O15014 1411 aa-1.36□□□□□ -2.63
COMMD3-209ENST00000471350 FAM107AO95990 144 aa-1.36□□□□□ -2.63
COMMD3-209ENST00000471350 SMIM6P0DI80 62 aa-1.36□□□□□ -2.63
COMMD3-209ENST00000471350 HSD17B12Q53GQ0 312 aa-1.36□□□□□ -2.63
COMMD3-209ENST00000471350 DYNLRB2Q8TF09 96 aa-1.36□□□□□ -2.63
COMMD3-209ENST00000471350 CCDC32Q9BV29 185 aa-1.36□□□□□ -2.63
COMMD3-209ENST00000471350 SLC35B3Q9H1N7 401 aa-1.36□□□□□ -2.63
COMMD3-209ENST00000471350 CBLN4Q9NTU7 201 aa-1.36□□□□□ -2.63
COMMD3-209ENST00000471350 KIAA1109Q2LD37 5005 aa-1.36□□□□□ -2.63
COMMD3-209ENST00000471350 A2MP01023 1474 aa-1.37□□□□□ -2.63
COMMD3-209ENST00000471350 MYO7BQ6PIF6 2116 aa-1.37□□□□□ -2.63
COMMD3-209ENST00000471350 M0R2T5 61 aa-1.37□□□□□ -2.63
COMMD3-209ENST00000471350 NPC2P61916 151 aa-1.37□□□□□ -2.63
COMMD3-209ENST00000471350 SPCS2Q15005 226 aa-1.37□□□□□ -2.63
COMMD3-209ENST00000471350 USP9YO00507 2555 aaPredicted RBP-1.37□□□□□ -2.63
COMMD3-209ENST00000471350 WDR97A6NE52 1622 aa-1.37□□□□□ -2.63
COMMD3-209ENST00000471350 PLXNA1Q9UIW2 1896 aa-1.37□□□□□ -2.63
COMMD3-209ENST00000471350 EPPK1P58107 5090 aaKnown RBP-1.37□□□□□ -2.63
COMMD3-209ENST00000471350 PCNX1Q96RV3 2341 aa-1.38□□□□□ -2.63
COMMD3-209ENST00000471350 SPRR2EP22531 72 aa-1.38□□□□□ -2.63
COMMD3-209ENST00000471350 HSD11B1P28845 292 aa-1.38□□□□□ -2.63
COMMD3-209ENST00000471350 RPL22P35268 128 aaKnown RBP-1.38□□□□□ -2.63
COMMD3-209ENST00000471350 EDDM3BP56851 147 aa-1.38□□□□□ -2.63
COMMD3-209ENST00000471350 PSPHP78330 225 aa-1.38□□□□□ -2.63
COMMD3-209ENST00000471350 Q5VV11 94 aa-1.38□□□□□ -2.63
COMMD3-209ENST00000471350 SPAG11AQ6PDA7 123 aa-1.38□□□□□ -2.63
COMMD3-209ENST00000471350 TMED4Q7Z7H5 227 aa-1.38□□□□□ -2.63
COMMD3-209ENST00000471350 SMIM20Q8N5G0 67 aa-1.38□□□□□ -2.63
COMMD3-209ENST00000471350 TP53AIP1Q9HCN2 124 aa-1.38□□□□□ -2.63
COMMD3-209ENST00000471350 NPVFQ9HCQ7 196 aa-1.38□□□□□ -2.63
COMMD3-209ENST00000471350 SCN3BQ9NY72 215 aa-1.38□□□□□ -2.63
COMMD3-209ENST00000471350 ZNF142P52746 1687 aaPredicted RBP-1.39□□□□□ -2.63
COMMD3-209ENST00000471350 BORCS7-ASMTA0A0B4J1R7 106 aa-1.39□□□□□ -2.63
COMMD3-209ENST00000471350 SLC25A5P05141 298 aaKnown RBP-1.39□□□□□ -2.63
COMMD3-209ENST00000471350 DCUN1D2Q6PH85 259 aa-1.39□□□□□ -2.63
COMMD3-209ENST00000471350 WFDC6Q9BQY6 131 aa-1.39□□□□□ -2.63
COMMD3-209ENST00000471350 MED31Q9Y3C7 131 aa-1.39□□□□□ -2.63
COMMD3-209ENST00000471350 ANKRD31Q8N7Z5 1873 aa-1.39□□□□□ -2.63
COMMD3-209ENST00000471350 KIAA0100Q14667 2235 aaKnown RBP-1.4□□□□□ -2.63
COMMD3-209ENST00000471350 TRAV12-3A0A0B4J271 114 aa-1.4□□□□□ -2.63
COMMD3-209ENST00000471350 SPINK4O60575 86 aa-1.4□□□□□ -2.63
COMMD3-209ENST00000471350 BCE1O60756 84 aa-1.4□□□□□ -2.63
COMMD3-209ENST00000471350 PIGYQ3MUY2 71 aa-1.4□□□□□ -2.63
COMMD3-209ENST00000471350 SNX29P2Q8IUI4 249 aa-1.4□□□□□ -2.63
COMMD3-209ENST00000471350 ATP6V0E2Q8NHE4 81 aa-1.4□□□□□ -2.63
COMMD3-209ENST00000471350 NOP16Q9Y3C1 178 aaKnown RBP-1.4□□□□□ -2.63
COMMD3-209ENST00000471350 DNAH6Q9C0G6 4158 aa-1.41□□□□□ -2.63
COMMD3-209ENST00000471350 TRBV6-1A0A0K0K1D8 114 aa-1.41□□□□□ -2.64
COMMD3-209ENST00000471350 SERPINB1P30740 379 aa-1.41□□□□□ -2.64
COMMD3-209ENST00000471350 KLK9Q2XQG4 91 aa-1.41□□□□□ -2.64
COMMD3-209ENST00000471350 CFAP126Q5VTH2 177 aa-1.41□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms