RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 KRTAP10-9P60411 292 aa2.41□□□□□ -2.02
MSH2-205ENST00000467323 MAXP61244 160 aa2.41□□□□□ -2.02
MSH2-205ENST00000467323 CDK5R1Q15078 307 aa2.41□□□□□ -2.02
MSH2-205ENST00000467323 ZNF181Q2M3W8 571 aa2.41□□□□□ -2.02
MSH2-205ENST00000467323 KRTAP21-3Q3LHN1 58 aa2.41□□□□□ -2.02
MSH2-205ENST00000467323 GLYATL3Q5SZD4 288 aa2.41□□□□□ -2.02
MSH2-205ENST00000467323 ZNF720Q7Z2F6 126 aa2.41□□□□□ -2.02
MSH2-205ENST00000467323 SLC50A1Q9BRV3 221 aa2.41□□□□□ -2.02
MSH2-205ENST00000467323 ERG28Q9UKR5 140 aa2.41□□□□□ -2.02
MSH2-205ENST00000467323 LHFPL6Q9Y693 200 aa2.41□□□□□ -2.02
MSH2-205ENST00000467323 COL12A1Q99715 3063 aa2.41□□□□□ -2.02
MSH2-205ENST00000467323 RTTNQ86VV8 2226 aa2.41□□□□□ -2.02
MSH2-205ENST00000467323 MYO7BQ6PIF6 2116 aa2.41□□□□□ -2.02
MSH2-205ENST00000467323 POLQO75417 2590 aa2.4□□□□□ -2.02
MSH2-205ENST00000467323 MEIKINA0A087WXM9 373 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.4□□□□□ -2.03
MSH2-205ENST00000467323 TRAV1-1A0A0B4J248 108 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 SPTY2D1-AS1A0A0U1RR47 76 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 OR2T8A6NH00 312 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 ZNF705FA8MVS1 300 aaPredicted RBP2.4□□□□□ -2.03
MSH2-205ENST00000467323 UBL3O95164 117 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 NCR2O95944 276 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 TSPAN19P0C672 248 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 FABP4P15090 132 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 FOXA3P55318 350 aaPredicted RBP2.4□□□□□ -2.03
MSH2-205ENST00000467323 SELENOWP63302 87 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 QRFPP83859 136 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 HES1Q14469 280 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 Q8IYB0 196 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 LINC00304Q8N9R0 145 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 OR2T35Q8NGX2 323 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 TP53RKQ96S44 253 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 BANF2Q9H503 90 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 TAF9BQ9HBM6 251 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 TLN1Q9Y490 2541 aaKnown RBP2.4□□□□□ -2.03
MSH2-205ENST00000467323 DOCK10Q96BY6 2186 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 ITPR3Q14573 2671 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 NOTCH2Q04721 2471 aa2.4□□□□□ -2.03
MSH2-205ENST00000467323 LRRK2Q5S007 2527 aa2.39□□□□□ -2.03
MSH2-205ENST00000467323 FBN2P35556 2912 aa2.39□□□□□ -2.03
MSH2-205ENST00000467323 FLNCQ14315 2725 aa2.39□□□□□ -2.03
MSH2-205ENST00000467323 K7ERU9 68 aa2.39□□□□□ -2.03
MSH2-205ENST00000467323 KRTAP10-3P60369 221 aa2.39□□□□□ -2.03
MSH2-205ENST00000467323 RPS25P62851 125 aaKnown RBP2.39□□□□□ -2.03
MSH2-205ENST00000467323 RNASE10Q5GAN6 216 aaKnown RBP2.39□□□□□ -2.03
MSH2-205ENST00000467323 HAGHLQ6PII5 290 aaPredicted RBP2.39□□□□□ -2.03
MSH2-205ENST00000467323 CTAGE3PQ8IX95 158 aa2.39□□□□□ -2.03
MSH2-205ENST00000467323 LYPD1Q8N2G4 141 aa2.39□□□□□ -2.03
MSH2-205ENST00000467323 CCL4L1Q8NHW4 92 aa2.39□□□□□ -2.03
MSH2-205ENST00000467323 PATE1Q8WXA2 126 aa2.39□□□□□ -2.03
MSH2-205ENST00000467323 POP5Q969H6 163 aaKnown RBP2.39□□□□□ -2.03
MSH2-205ENST00000467323 TIMM21Q9BVV7 248 aa2.39□□□□□ -2.03
MSH2-205ENST00000467323 LPAR5Q9H1C0 372 aa2.39□□□□□ -2.03
MSH2-205ENST00000467323 CST9LQ9H4G1 147 aa2.39□□□□□ -2.03
MSH2-205ENST00000467323 TPRKBQ9Y3C4 175 aa2.39□□□□□ -2.03
MSH2-205ENST00000467323 CACNA1CQ13936 2221 aa2.39□□□□□ -2.03
MSH2-205ENST00000467323 PCNX1Q96RV3 2341 aa2.39□□□□□ -2.03
MSH2-205ENST00000467323 NAV3Q8IVL0 2385 aa2.38□□□□□ -2.03
MSH2-205ENST00000467323 ITPR2Q14571 2701 aa2.38□□□□□ -2.03
MSH2-205ENST00000467323 A0A1B0GV90 55 aa2.38□□□□□ -2.03
MSH2-205ENST00000467323 M0R233 179 aa2.38□□□□□ -2.03
MSH2-205ENST00000467323 IGKV1-17P01599 117 aa2.38□□□□□ -2.03
MSH2-205ENST00000467323 HBDP02042 147 aa2.38□□□□□ -2.03
MSH2-205ENST00000467323 APOC1P02654 83 aa2.38□□□□□ -2.03
MSH2-205ENST00000467323 TCRAP04437 139 aa2.38□□□□□ -2.03
MSH2-205ENST00000467323 GPX1P07203 203 aa2.38□□□□□ -2.03
MSH2-205ENST00000467323 SAA1P0DJI8 122 aaPredicted RBP2.38□□□□□ -2.03
MSH2-205ENST00000467323 S100A1P23297 94 aa2.38□□□□□ -2.03
MSH2-205ENST00000467323 ROMO1P60602 79 aa2.38□□□□□ -2.03
MSH2-205ENST00000467323 RRAS2P62070 204 aaPredicted RBP2.38□□□□□ -2.03
MSH2-205ENST00000467323 GKN2Q86XP6 184 aa2.38□□□□□ -2.03
MSH2-205ENST00000467323 ARL11Q969Q4 196 aa2.38□□□□□ -2.03
MSH2-205ENST00000467323 HYLS1Q96M11 299 aa2.38□□□□□ -2.03
MSH2-205ENST00000467323 NIT2Q9NQR4 276 aa2.38□□□□□ -2.03
MSH2-205ENST00000467323 SPENQ96T58 3664 aaKnown RBP2.37□□□□□ -2.03
MSH2-205ENST00000467323 NCOA6Q14686 2063 aaPredicted RBP2.37□□□□□ -2.03
MSH2-205ENST00000467323 PKDREJQ9NTG1 2253 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 A0A0G2JQZ4 141 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 hDV103S1A0JD37 113 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 SDHAF1A6NFY7 115 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 ZNF727A8MUV8 499 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 TNFP01375 233 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 ASAH2BP0C7U1 165 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 P0C880 135 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 IGLC6P0CF74 106 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 SPTBP11277 2137 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 COX6B1P14854 86 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 HIST1H1BP16401 226 aaKnown RBP2.37□□□□□ -2.03
MSH2-205ENST00000467323 KDELR1P24390 212 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 SSR2P43308 183 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 AKR1D1P51857 326 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 COPZ1P61923 177 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 CDK6Q00534 326 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 ZNF846Q147U1 533 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 ELOBQ15370 118 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 WHAMMP3Q1A5X7 153 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 C9orf163Q8N9P6 203 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 OR5D14Q8NGL3 314 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 TMEM254Q8TBM7 123 aa2.37□□□□□ -2.03
MSH2-205ENST00000467323 OR4C12Q96R67 309 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms