RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 SPTSSBQ8NFR3 76 aa1.8□□□□□ -2.12
USP25-207ENST00000464435 MRPL35Q9NZE8 188 aaKnown RBP1.8□□□□□ -2.12
USP25-207ENST00000464435 AP4S1Q9Y587 144 aa1.8□□□□□ -2.12
USP25-207ENST00000464435 COL5A3P25940 1745 aaPredicted RBP1.8□□□□□ -2.12
USP25-207ENST00000464435 PLXNA2O75051 1894 aa1.8□□□□□ -2.12
USP25-207ENST00000464435 PTPRDP23468 1912 aa1.79□□□□□ -2.12
USP25-207ENST00000464435 SDK1Q7Z5N4 2213 aa1.79□□□□□ -2.12
USP25-207ENST00000464435 RTTNQ86VV8 2226 aa1.79□□□□□ -2.12
USP25-207ENST00000464435 TRBV10-3A0A0K0K1G6 114 aa1.79□□□□□ -2.12
USP25-207ENST00000464435 CXorf51AA0A1B0GTR3 108 aa1.79□□□□□ -2.12
USP25-207ENST00000464435 MRPS14O60783 128 aaKnown RBP1.79□□□□□ -2.12
USP25-207ENST00000464435 ATP5EP56381 51 aaPredicted RBP1.79□□□□□ -2.12
USP25-207ENST00000464435 SPRNQ5BIV9 151 aa1.79□□□□□ -2.12
USP25-207ENST00000464435 LINC00322Q6ZN03 302 aaPredicted RBP1.79□□□□□ -2.12
USP25-207ENST00000464435 C5orf38Q86SI9 138 aa1.79□□□□□ -2.12
USP25-207ENST00000464435 NDUFA11Q86Y39 141 aa1.79□□□□□ -2.12
USP25-207ENST00000464435 KRTAP4-1Q9BYQ7 146 aa1.79□□□□□ -2.12
USP25-207ENST00000464435 Q9H521 79 aa1.79□□□□□ -2.12
USP25-207ENST00000464435 C22orf24Q9Y442 160 aa1.79□□□□□ -2.12
USP25-207ENST00000464435 MCM3APO60318 1980 aa1.78□□□□□ -2.12
USP25-207ENST00000464435 PTPRMP28827 1452 aa1.78□□□□□ -2.12
USP25-207ENST00000464435 UBE2L5PA0A1B0GUS4 154 aa1.78□□□□□ -2.12
USP25-207ENST00000464435 TMEM262E9PQX1 116 aa1.78□□□□□ -2.12
USP25-207ENST00000464435 INE1O15225 51 aa1.78□□□□□ -2.12
USP25-207ENST00000464435 UBE2L3P68036 154 aaKnown RBP1.78□□□□□ -2.12
USP25-207ENST00000464435 IFI27L1Q96BM0 104 aa1.78□□□□□ -2.12
USP25-207ENST00000464435 BAZ2BQ9UIF8 2168 aaKnown RBP1.78□□□□□ -2.13
USP25-207ENST00000464435 NINQ8N4C6 2090 aa1.78□□□□□ -2.13
USP25-207ENST00000464435 IFT140Q96RY7 1462 aa1.77□□□□□ -2.13
USP25-207ENST00000464435 CDK12Q9NYV4 1490 aaPredicted RBP1.77□□□□□ -2.13
USP25-207ENST00000464435 CPSF1Q10570 1443 aaKnown RBP1.77□□□□□ -2.13
USP25-207ENST00000464435 NSD3Q9BZ95 1437 aa1.77□□□□□ -2.13
USP25-207ENST00000464435 ALPK2Q86TB3 2170 aa1.77□□□□□ -2.13
USP25-207ENST00000464435 TRBV6-7A0A0A0MS04 114 aa1.77□□□□□ -2.13
USP25-207ENST00000464435 TRAV12-3A0A0B4J271 114 aa1.77□□□□□ -2.13
USP25-207ENST00000464435 MPC2O95563 127 aa1.77□□□□□ -2.13
USP25-207ENST00000464435 IGLV3-1P01715 115 aa1.77□□□□□ -2.13
USP25-207ENST00000464435 IGHV3-30P01768 117 aa1.77□□□□□ -2.13
USP25-207ENST00000464435 CCKP06307 115 aa1.77□□□□□ -2.13
USP25-207ENST00000464435 IGHV3-30-5P0DP03 117 aa1.77□□□□□ -2.13
USP25-207ENST00000464435 PDE6GP18545 87 aa1.77□□□□□ -2.13
USP25-207ENST00000464435 SNCAP37840 140 aa1.77□□□□□ -2.13
USP25-207ENST00000464435 DCDP81605 110 aaKnown RBP1.77□□□□□ -2.13
USP25-207ENST00000464435 SPATA45Q537H7 98 aa1.77□□□□□ -2.13
USP25-207ENST00000464435 C4orf33Q8N1A6 199 aa1.77□□□□□ -2.13
USP25-207ENST00000464435 ZNF625Q96I27 306 aaPredicted RBP1.77□□□□□ -2.13
USP25-207ENST00000464435 ODF3Q96PU9 254 aa1.77□□□□□ -2.13
USP25-207ENST00000464435 SNHG12Q9BXW3 62 aa1.77□□□□□ -2.13
USP25-207ENST00000464435 FREM1Q5H8C1 2179 aa1.76□□□□□ -2.13
USP25-207ENST00000464435 TROQ12816 1431 aaPredicted RBP1.76□□□□□ -2.13
USP25-207ENST00000464435 TNRC6AQ8NDV7 1962 aaKnown RBP1.76□□□□□ -2.13
USP25-207ENST00000464435 IGKV3-7A0A075B6H7 116 aa1.76□□□□□ -2.13
USP25-207ENST00000464435 TRAV13-2A0A0B4J235 113 aa1.76□□□□□ -2.13
USP25-207ENST00000464435 M0R2N4 97 aa1.76□□□□□ -2.13
USP25-207ENST00000464435 HCRTO43612 131 aa1.76□□□□□ -2.13
USP25-207ENST00000464435 SSSCA1O60232 199 aa1.76□□□□□ -2.13
USP25-207ENST00000464435 RPL37AP61513 92 aaKnown RBP1.76□□□□□ -2.13
USP25-207ENST00000464435 UBA52P62987 128 aaKnown RBP1.76□□□□□ -2.13
USP25-207ENST00000464435 CYP2G1PQ6ZSU1 146 aa1.76□□□□□ -2.13
USP25-207ENST00000464435 COMMD6Q7Z4G1 85 aa1.76□□□□□ -2.13
USP25-207ENST00000464435 SBSPONQ8IVN8 264 aa1.76□□□□□ -2.13
USP25-207ENST00000464435 C10orf82Q8WW14 230 aa1.76□□□□□ -2.13
USP25-207ENST00000464435 SPHKAPQ2M3C7 1700 aa1.76□□□□□ -2.13
USP25-207ENST00000464435 ANKRD26Q9UPS8 1709 aa1.76□□□□□ -2.13
USP25-207ENST00000464435 ROBO1Q9Y6N7 1651 aa1.76□□□□□ -2.13
USP25-207ENST00000464435 CC2D2AQ9P2K1 1620 aa1.76□□□□□ -2.13
USP25-207ENST00000464435 BAZ1AQ9NRL2 1556 aaPredicted RBP1.76□□□□□ -2.13
USP25-207ENST00000464435 FYCO1Q9BQS8 1478 aa1.75□□□□□ -2.13
USP25-207ENST00000464435 MUC22E2RYF6 1773 aaPredicted RBP1.75□□□□□ -2.13
USP25-207ENST00000464435 LAMB1P07942 1786 aa1.75□□□□□ -2.13
USP25-207ENST00000464435 PRDM2Q13029 1718 aa1.75□□□□□ -2.13
USP25-207ENST00000464435 MYOFQ9NZM1 2061 aa1.75□□□□□ -2.13
USP25-207ENST00000464435 CHD3Q12873 2000 aaKnown RBP1.75□□□□□ -2.13
USP25-207ENST00000464435 HIGD1CA8MV81 97 aa1.75□□□□□ -2.13
USP25-207ENST00000464435 LINC00032P0C843 101 aa1.75□□□□□ -2.13
USP25-207ENST00000464435 IL9P15248 144 aa1.75□□□□□ -2.13
USP25-207ENST00000464435 GDF5OSQ5U4N7 250 aa1.75□□□□□ -2.13
USP25-207ENST00000464435 MYOZ3Q8TDC0 251 aa1.75□□□□□ -2.13
USP25-207ENST00000464435 DPY30Q9C005 99 aa1.75□□□□□ -2.13
USP25-207ENST00000464435 DPH3P1Q9H4G8 78 aa1.75□□□□□ -2.13
USP25-207ENST00000464435 V9GYS6 101 aa1.75□□□□□ -2.13
USP25-207ENST00000464435 PRRC2BQ5JSZ5 2229 aaKnown RBP1.75□□□□□ -2.13
USP25-207ENST00000464435 NWD2Q9ULI1 1742 aa1.74□□□□□ -2.13
USP25-207ENST00000464435 CR1P17927 2039 aa1.74□□□□□ -2.13
USP25-207ENST00000464435 KDM6BO15054 1643 aa1.74□□□□□ -2.13
USP25-207ENST00000464435 LOC110117498A0A087WWA1 95 aa1.74□□□□□ -2.13
USP25-207ENST00000464435 H3BQ15 152 aa1.74□□□□□ -2.13
USP25-207ENST00000464435 ARHGAP5Q13017 1502 aa1.74□□□□□ -2.13
USP25-207ENST00000464435 OTOGLQ3ZCN5 2332 aa1.74□□□□□ -2.13
USP25-207ENST00000464435 IGKV3D-7A0A0C4DH55 119 aa1.73□□□□□ -2.13
USP25-207ENST00000464435 IGKV3OR2-268A0A0C4DH90 116 aa1.73□□□□□ -2.13
USP25-207ENST00000464435 TEX49A0A1B0GTD5 131 aa1.73□□□□□ -2.13
USP25-207ENST00000464435 RBAKDNA6NC62 111 aa1.73□□□□□ -2.13
USP25-207ENST00000464435 HCG22E2RYF7 251 aa1.73□□□□□ -2.13
USP25-207ENST00000464435 CCL8P80075 99 aa1.73□□□□□ -2.13
USP25-207ENST00000464435 ZNF563Q8TA94 476 aa1.73□□□□□ -2.13
USP25-207ENST00000464435 VAMP8Q9BV40 100 aa1.73□□□□□ -2.13
USP25-207ENST00000464435 ARAP2Q8WZ64 1704 aa1.73□□□□□ -2.13
USP25-207ENST00000464435 ADGRL2O95490 1459 aa1.73□□□□□ -2.13
USP25-207ENST00000464435 C10orf71Q711Q0 1435 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms