RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 ZNF524Q96C55 264 aa7.81□□□□□ -1.16
SCN5A-210ENST00000455624 KLK12Q9UKR0 248 aa7.81□□□□□ -1.16
SCN5A-210ENST00000455624 PCP2Q8IVA1 136 aa7.81□□□□□ -1.16
SCN5A-210ENST00000455624 K7EIM0 57 aa7.81□□□□□ -1.16
SCN5A-210ENST00000455624 PTPRDP23468 1912 aa7.81□□□□□ -1.16
SCN5A-210ENST00000455624 ZFP36P26651 326 aaKnown RBP7.81□□□□□ -1.16
SCN5A-210ENST00000455624 Q6ZVH6 145 aa7.81□□□□□ -1.16
SCN5A-210ENST00000455624 K7EMT4 169 aa7.8□□□□□ -1.16
SCN5A-210ENST00000455624 HIGD2BQ4VC39 106 aa7.8□□□□□ -1.16
SCN5A-210ENST00000455624 FREM3P0C091 2139 aa7.8□□□□□ -1.16
SCN5A-210ENST00000455624 SPTBN2O15020 2390 aa7.8□□□□□ -1.16
SCN5A-210ENST00000455624 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.8□□□□□ -1.16
SCN5A-210ENST00000455624 NDUFC2O95298 119 aa7.8□□□□□ -1.16
SCN5A-210ENST00000455624 DEFB125Q8N687 156 aa7.8□□□□□ -1.16
SCN5A-210ENST00000455624 FGF23Q9GZV9 251 aaPredicted RBP7.8□□□□□ -1.16
SCN5A-210ENST00000455624 A0A0J9YXV3 536 aa7.8□□□□□ -1.16
SCN5A-210ENST00000455624 KRTAP27-1Q3LI81 207 aa7.8□□□□□ -1.16
SCN5A-210ENST00000455624 NUP210Q8TEM1 1887 aaPredicted RBP7.8□□□□□ -1.16
SCN5A-210ENST00000455624 CTSGP08311 255 aa7.8□□□□□ -1.16
SCN5A-210ENST00000455624 COX7BP24311 80 aa7.8□□□□□ -1.16
SCN5A-210ENST00000455624 INSL3P51460 131 aa7.8□□□□□ -1.16
SCN5A-210ENST00000455624 TMEM263Q8WUH6 116 aaKnown RBP7.79□□□□□ -1.16
SCN5A-210ENST00000455624 MED14OSP0DP75 135 aa7.79□□□□□ -1.16
SCN5A-210ENST00000455624 WFDC11Q8NEX6 87 aa7.79□□□□□ -1.16
SCN5A-210ENST00000455624 TET1Q8NFU7 2136 aa7.79□□□□□ -1.16
SCN5A-210ENST00000455624 DENND4AQ7Z401 1863 aa7.79□□□□□ -1.16
SCN5A-210ENST00000455624 FAM186AA6NE01 2351 aa7.79□□□□□ -1.16
SCN5A-210ENST00000455624 IGKV1-17P01599 117 aa7.79□□□□□ -1.16
SCN5A-210ENST00000455624 IGKV4-1P06312 121 aa7.79□□□□□ -1.16
SCN5A-210ENST00000455624 RPL39P62891 51 aaKnown RBP7.79□□□□□ -1.16
SCN5A-210ENST00000455624 LRCOL1A6NCL2 159 aa7.79□□□□□ -1.16
SCN5A-210ENST00000455624 CCL25O15444 150 aa7.79□□□□□ -1.16
SCN5A-210ENST00000455624 TRBV12-3P01733 135 aa7.79□□□□□ -1.16
SCN5A-210ENST00000455624 SPATA25Q9BR10 227 aa7.79□□□□□ -1.16
SCN5A-210ENST00000455624 HILS1P60008 231 aa7.78□□□□□ -1.16
SCN5A-210ENST00000455624 EP300Q09472 2414 aaPredicted RBP7.78□□□□□ -1.16
SCN5A-210ENST00000455624 NFE4Q86UQ8 179 aa7.78□□□□□ -1.16
SCN5A-210ENST00000455624 MAP6D1Q9H9H5 199 aa7.78□□□□□ -1.16
SCN5A-210ENST00000455624 PRAC2D3DTV9 90 aa7.78□□□□□ -1.16
SCN5A-210ENST00000455624 CHD3Q12873 2000 aaKnown RBP7.78□□□□□ -1.16
SCN5A-210ENST00000455624 LGALS9O00182 355 aa7.77□□□□□ -1.16
SCN5A-210ENST00000455624 CASC2Q6XLA1 102 aa7.77□□□□□ -1.16
SCN5A-210ENST00000455624 MPDZO75970 2070 aa7.77□□□□□ -1.17
SCN5A-210ENST00000455624 IGKV2-24A0A0C4DH68 120 aa7.77□□□□□ -1.17
SCN5A-210ENST00000455624 C11orf86A6NJI1 115 aa7.77□□□□□ -1.17
SCN5A-210ENST00000455624 SS18L2Q9UHA2 77 aa7.77□□□□□ -1.17
SCN5A-210ENST00000455624 A4D1N5 150 aa7.77□□□□□ -1.17
SCN5A-210ENST00000455624 JMJD7-PLA2G4BH0Y9G9 81 aa7.77□□□□□ -1.17
SCN5A-210ENST00000455624 TCF20Q9UGU0 1960 aaKnown RBP7.77□□□□□ -1.17
SCN5A-210ENST00000455624 PLXND1Q9Y4D7 1925 aa7.77□□□□□ -1.17
SCN5A-210ENST00000455624 A6NDX4 124 aa7.77□□□□□ -1.17
SCN5A-210ENST00000455624 ATOX1O00244 68 aa7.77□□□□□ -1.17
SCN5A-210ENST00000455624 LECT2O14960 151 aa7.76□□□□□ -1.17
SCN5A-210ENST00000455624 CLEC2BQ92478 149 aa7.76□□□□□ -1.17
SCN5A-210ENST00000455624 TEX22C9J3V5 150 aa7.76□□□□□ -1.17
SCN5A-210ENST00000455624 TMEM256-PLSCR3K7ERE1 68 aa7.76□□□□□ -1.17
SCN5A-210ENST00000455624 SIRPDQ9H106 197 aa7.76□□□□□ -1.17
SCN5A-210ENST00000455624 CRYGDP07320 174 aa7.76□□□□□ -1.17
SCN5A-210ENST00000455624 Q8N7P7 452 aa7.76□□□□□ -1.17
SCN5A-210ENST00000455624 MSRB1Q9NZV6 116 aa7.76□□□□□ -1.17
SCN5A-210ENST00000455624 NCKAP5O14513 1909 aa7.76□□□□□ -1.17
SCN5A-210ENST00000455624 TNRC6BQ9UPQ9 1833 aaKnown RBP7.76□□□□□ -1.17
SCN5A-210ENST00000455624 KIR2DL5BQ8NHK3 375 aa7.76□□□□□ -1.17
SCN5A-210ENST00000455624 NLRC5Q86WI3 1866 aa7.76□□□□□ -1.17
SCN5A-210ENST00000455624 SMIM20Q8N5G0 67 aa7.75□□□□□ -1.17
SCN5A-210ENST00000455624 DYSFO75923 2080 aa7.75□□□□□ -1.17
SCN5A-210ENST00000455624 PLA2G5P39877 138 aa7.75□□□□□ -1.17
SCN5A-210ENST00000455624 FAM19A1Q7Z5A9 133 aa7.75□□□□□ -1.17
SCN5A-210ENST00000455624 PRO0255Q9UI72 69 aa7.75□□□□□ -1.17
SCN5A-210ENST00000455624 LRRC75A-AS1Q8N1F1 130 aa7.75□□□□□ -1.17
SCN5A-210ENST00000455624 MIR7-3HGQ8N6C7 128 aa7.75□□□□□ -1.17
SCN5A-210ENST00000455624 TRBV6-1A0A0K0K1D8 114 aa7.75□□□□□ -1.17
SCN5A-210ENST00000455624 PATE2Q6UY27 113 aa7.75□□□□□ -1.17
SCN5A-210ENST00000455624 ZGRF1Q86YA3 2104 aa7.74□□□□□ -1.17
SCN5A-210ENST00000455624 PRORYQ9H606 182 aa7.74□□□□□ -1.17
SCN5A-210ENST00000455624 TRAV26-1A0A087WT03 109 aa7.74□□□□□ -1.17
SCN5A-210ENST00000455624 UBE2D1P51668 147 aa7.74□□□□□ -1.17
SCN5A-210ENST00000455624 IGHV1-58A0A0C4DH39 117 aa7.73□□□□□ -1.17
SCN5A-210ENST00000455624 FAM110AQ9BQ89 295 aa7.73□□□□□ -1.17
SCN5A-210ENST00000455624 TRBV10-2A0A0K0K1G8 114 aa7.73□□□□□ -1.17
SCN5A-210ENST00000455624 REG3AQ06141 175 aa7.73□□□□□ -1.17
SCN5A-210ENST00000455624 LINC00173Q6ZV60 143 aa7.73□□□□□ -1.17
SCN5A-210ENST00000455624 MDFICQ9P1T7 246 aa7.73□□□□□ -1.17
SCN5A-210ENST00000455624 RLFQ13129 1914 aa7.73□□□□□ -1.17
SCN5A-210ENST00000455624 NOTCH3Q9UM47 2321 aa7.73□□□□□ -1.17
SCN5A-210ENST00000455624 WNK2Q9Y3S1 2297 aa7.73□□□□□ -1.17
SCN5A-210ENST00000455624 UPK3BQ9BT76 320 aa7.72□□□□□ -1.17
SCN5A-210ENST00000455624 LINC00269Q8N2A0 174 aa7.72□□□□□ -1.17
SCN5A-210ENST00000455624 FAM236AA0A1B0GUQ0 79 aa7.72□□□□□ -1.17
SCN5A-210ENST00000455624 FAM236BA0A1B0GV22 79 aa7.72□□□□□ -1.17
SCN5A-210ENST00000455624 IGHV4-31P0DP07 118 aa7.72□□□□□ -1.17
SCN5A-210ENST00000455624 DEFB1P60022 68 aa7.72□□□□□ -1.17
SCN5A-210ENST00000455624 PLCE1Q9P212 2302 aa7.72□□□□□ -1.17
SCN5A-210ENST00000455624 A0A087WZ39 114 aa7.72□□□□□ -1.17
SCN5A-210ENST00000455624 ZFAND2AQ8N6M9 145 aa7.72□□□□□ -1.17
SCN5A-210ENST00000455624 HELZP42694 1942 aaKnown RBP7.72□□□□□ -1.17
SCN5A-210ENST00000455624 MYO7BQ6PIF6 2116 aa7.72□□□□□ -1.17
SCN5A-210ENST00000455624 LOXL1Q08397 574 aaPredicted RBP7.72□□□□□ -1.17
SCN5A-210ENST00000455624 RNASE8Q8TDE3 154 aaKnown RBP7.71□□□□□ -1.17
SCN5A-210ENST00000455624 A0A0J9YX75 114 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms