RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 M0R2P5 195 aa12.14□□□□□ -0.47
DHFR-201ENST00000439211 ZNF292O60281 2723 aa12.14□□□□□ -0.47
DHFR-201ENST00000439211 TRACP01848 142 aa12.14□□□□□ -0.47
DHFR-201ENST00000439211 C1orf43Q9BWL3 253 aa12.14□□□□□ -0.47
DHFR-201ENST00000439211 SETD2Q9BYW2 2564 aaPredicted RBP12.14□□□□□ -0.47
DHFR-201ENST00000439211 UQCRQO14949 82 aa12.14□□□□□ -0.47
DHFR-201ENST00000439211 ODF3Q96PU9 254 aa12.14□□□□□ -0.47
DHFR-201ENST00000439211 MDFICQ9P1T7 246 aa12.14□□□□□ -0.47
DHFR-201ENST00000439211 RBAKDNA6NC62 111 aa12.13□□□□□ -0.47
DHFR-201ENST00000439211 C16orf92Q96LL3 132 aa12.13□□□□□ -0.47
DHFR-201ENST00000439211 F5H697 171 aa12.13□□□□□ -0.47
DHFR-201ENST00000439211 RS1O15537 224 aa12.13□□□□□ -0.47
DHFR-201ENST00000439211 PDE6HQ13956 83 aa12.13□□□□□ -0.47
DHFR-201ENST00000439211 LGALS9O00182 355 aa12.13□□□□□ -0.47
DHFR-201ENST00000439211 NPC2P61916 151 aa12.13□□□□□ -0.47
DHFR-201ENST00000439211 TRBV10-2A0A0K0K1G8 114 aa12.12□□□□□ -0.47
DHFR-201ENST00000439211 TRGV3P03979 118 aa12.12□□□□□ -0.47
DHFR-201ENST00000439211 NDPQ00604 133 aa12.12□□□□□ -0.47
DHFR-201ENST00000439211 RNF185Q96GF1 192 aa12.12□□□□□ -0.47
DHFR-201ENST00000439211 METTL26Q96S19 204 aa12.12□□□□□ -0.47
DHFR-201ENST00000439211 LRRC75A-AS1Q8N1F1 130 aa12.12□□□□□ -0.47
DHFR-201ENST00000439211 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.11□□□□□ -0.47
DHFR-201ENST00000439211 PAPPA-AS1Q5QFB9 102 aa12.11□□□□□ -0.47
DHFR-201ENST00000439211 SMIM2Q9BVW6 85 aa12.11□□□□□ -0.47
DHFR-201ENST00000439211 LINC01587Q99440 93 aa12.11□□□□□ -0.47
DHFR-201ENST00000439211 G3V318 75 aa12.11□□□□□ -0.47
DHFR-201ENST00000439211 FANCD2OSQ96PS1 177 aa12.11□□□□□ -0.47
DHFR-201ENST00000439211 HRCT1Q6UXD1 115 aa12.1□□□□□ -0.47
DHFR-201ENST00000439211 A0A0J9YY99 117 aa12.1□□□□□ -0.47
DHFR-201ENST00000439211 LINC01619G3V211 115 aa12.1□□□□□ -0.47
DHFR-201ENST00000439211 TMEM219Q86XT9 240 aa12.1□□□□□ -0.47
DHFR-201ENST00000439211 SONP18583 2426 aaKnown RBP12.1□□□□□ -0.47
DHFR-201ENST00000439211 hADV29S1A0JD25 119 aa12.09□□□□□ -0.47
DHFR-201ENST00000439211 K7ENP7 123 aa12.09□□□□□ -0.47
DHFR-201ENST00000439211 Q6ZS46 218 aa12.09□□□□□ -0.47
DHFR-201ENST00000439211 ZNF80P51504 273 aaPredicted RBP12.09□□□□□ -0.47
DHFR-201ENST00000439211 IGLV11-55A0A075B6I3 123 aa12.08□□□□□ -0.47
DHFR-201ENST00000439211 TRAV12-1A0A0B4J245 112 aa12.08□□□□□ -0.47
DHFR-201ENST00000439211 PAX8Q06710 450 aa12.08□□□□□ -0.47
DHFR-201ENST00000439211 DYNAPQ8N1N2 210 aa12.08□□□□□ -0.47
DHFR-201ENST00000439211 NACAE9PAV3 2078 aa12.08□□□□□ -0.48
DHFR-201ENST00000439211 SUMO2P61956 95 aaKnown RBP12.08□□□□□ -0.48
DHFR-201ENST00000439211 SORL1Q92673 2214 aa12.08□□□□□ -0.48
DHFR-201ENST00000439211 MYO9AB2RTY4 2548 aa12.08□□□□□ -0.48
DHFR-201ENST00000439211 CTSGP08311 255 aa12.08□□□□□ -0.48
DHFR-201ENST00000439211 PRAC2D3DTV9 90 aa12.07□□□□□ -0.48
DHFR-201ENST00000439211 J3QQQ9 107 aa12.07□□□□□ -0.48
DHFR-201ENST00000439211 PHLDA3Q9Y5J5 127 aa12.07□□□□□ -0.48
DHFR-201ENST00000439211 MAP1AP78559 2803 aaPredicted RBP12.07□□□□□ -0.48
DHFR-201ENST00000439211 SMG1Q96Q15 3661 aaKnown RBP12.07□□□□□ -0.48
DHFR-201ENST00000439211 IGHV3-33P01772 117 aa12.07□□□□□ -0.48
DHFR-201ENST00000439211 SRSF2Q01130 221 aaKnown RBP12.07□□□□□ -0.48
DHFR-201ENST00000439211 MUSTN1Q8IVN3 82 aa12.07□□□□□ -0.48
DHFR-201ENST00000439211 C11orf86A6NJI1 115 aa12.07□□□□□ -0.48
DHFR-201ENST00000439211 M0R1W7 72 aa12.07□□□□□ -0.48
DHFR-201ENST00000439211 ATP6V0E1O15342 81 aa12.07□□□□□ -0.48
DHFR-201ENST00000439211 SPRY2O43597 315 aa12.07□□□□□ -0.48
DHFR-201ENST00000439211 ZNF22P17026 224 aaPredicted RBP12.07□□□□□ -0.48
DHFR-201ENST00000439211 LY6EQ16553 131 aa12.07□□□□□ -0.48
DHFR-201ENST00000439211 BAALCQ8WXS3 180 aa12.07□□□□□ -0.48
DHFR-201ENST00000439211 HIVEP3Q5T1R4 2406 aa12.07□□□□□ -0.48
DHFR-201ENST00000439211 NBL1P41271 181 aa12.06□□□□□ -0.48
DHFR-201ENST00000439211 EEF1AKMT3Q96AZ1 226 aa12.06□□□□□ -0.48
DHFR-201ENST00000439211 TRBV6-1A0A0K0K1D8 114 aa12.06□□□□□ -0.48
DHFR-201ENST00000439211 IGHV3-11P01762 117 aa12.06□□□□□ -0.48
DHFR-201ENST00000439211 IGHG4P01861 327 aa12.06□□□□□ -0.48
DHFR-201ENST00000439211 CEMP1Q6PRD7 247 aaPredicted RBP12.06□□□□□ -0.48
DHFR-201ENST00000439211 SBSPONQ8IVN8 264 aa12.05□□□□□ -0.48
DHFR-201ENST00000439211 C14orf178Q8N769 122 aaPredicted RBP12.05□□□□□ -0.48
DHFR-201ENST00000439211 CLEC2BQ92478 149 aa12.05□□□□□ -0.48
DHFR-201ENST00000439211 IGHV3-30P01768 117 aa12.05□□□□□ -0.48
DHFR-201ENST00000439211 IGHV3-30-5P0DP03 117 aa12.05□□□□□ -0.48
DHFR-201ENST00000439211 SAA4P35542 130 aa12.05□□□□□ -0.48
DHFR-201ENST00000439211 LY6DQ14210 128 aa12.05□□□□□ -0.48
DHFR-201ENST00000439211 DUX5Q96PT3 197 aa12.05□□□□□ -0.48
DHFR-201ENST00000439211 LRBAP50851 2863 aa12.04□□□□□ -0.48
DHFR-201ENST00000439211 IGHV7-81A0A0B4J1V7 117 aa12.04□□□□□ -0.48
DHFR-201ENST00000439211 LY6LH3BQJ8 138 aa12.04□□□□□ -0.48
DHFR-201ENST00000439211 CFHR4Q92496 578 aa12.04□□□□□ -0.48
DHFR-201ENST00000439211 TRAV13-1A0A0B4J241 112 aa12.04□□□□□ -0.48
DHFR-201ENST00000439211 NPBQ8NG41 125 aa12.04□□□□□ -0.48
DHFR-201ENST00000439211 TP53TG1Q9Y2A0 90 aa12.04□□□□□ -0.48
DHFR-201ENST00000439211 ADARB2-AS1A8MUL3 147 aa12.03□□□□□ -0.48
DHFR-201ENST00000439211 SLC25A29Q8N8R3 303 aa12.03□□□□□ -0.48
DHFR-201ENST00000439211 SLC50A1Q9BRV3 221 aa12.03□□□□□ -0.48
DHFR-201ENST00000439211 NEXN-AS1Q8NBZ9 246 aa12.03□□□□□ -0.48
DHFR-201ENST00000439211 UCNP55089 124 aa12.02□□□□□ -0.48
DHFR-201ENST00000439211 RPL39LQ96EH5 51 aaKnown RBP12.02□□□□□ -0.49
DHFR-201ENST00000439211 AGPAT4-IT1Q9H0P7 198 aa12.02□□□□□ -0.49
DHFR-201ENST00000439211 PKIGQ9Y2B9 76 aa12.02□□□□□ -0.49
DHFR-201ENST00000439211 BRD3OSQ6XYD6 125 aa12.02□□□□□ -0.49
DHFR-201ENST00000439211 DSCR8Q96T75 97 aa12.02□□□□□ -0.49
DHFR-201ENST00000439211 ZFP36P26651 326 aaKnown RBP12.01□□□□□ -0.49
DHFR-201ENST00000439211 TRIAP1O43715 76 aa12.01□□□□□ -0.49
DHFR-201ENST00000439211 MINOS1Q5TGZ0 78 aa12.01□□□□□ -0.49
DHFR-201ENST00000439211 LINC00526Q96FQ7 95 aa12.01□□□□□ -0.49
DHFR-201ENST00000439211 BPESC1Q9GZL8 116 aa12.01□□□□□ -0.49
DHFR-201ENST00000439211 MINOS1-NBL1R4GNA1 71 aa12.01□□□□□ -0.49
DHFR-201ENST00000439211 H3BT86 120 aa12.01□□□□□ -0.49
DHFR-201ENST00000439211 TLN2Q9Y4G6 2542 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms