RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 MRPL35Q9NZE8 188 aaKnown RBP11.91□□□□□ -0.5
NEDD4-202ENST00000435532 TRBV6-1A0A0K0K1D8 114 aa11.91□□□□□ -0.5
NEDD4-202ENST00000435532 E7EUB6 86 aa11.91□□□□□ -0.5
NEDD4-202ENST00000435532 LINC01006Q8NI28 216 aa11.91□□□□□ -0.5
NEDD4-202ENST00000435532 LINC01548A6NM66 108 aa11.9□□□□□ -0.5
NEDD4-202ENST00000435532 SOCS3O14543 225 aa11.9□□□□□ -0.5
NEDD4-202ENST00000435532 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.9□□□□□ -0.5
NEDD4-202ENST00000435532 C9JQL5 133 aa11.9□□□□□ -0.5
NEDD4-202ENST00000435532 TRBV10-1A0A0K0K1A3 114 aa11.9□□□□□ -0.5
NEDD4-202ENST00000435532 VSIG2Q96IQ7 327 aa11.9□□□□□ -0.5
NEDD4-202ENST00000435532 ARFGEF3Q5TH69 2177 aa11.9□□□□□ -0.5
NEDD4-202ENST00000435532 DYSFO75923 2080 aa11.9□□□□□ -0.51
NEDD4-202ENST00000435532 CXCL5P42830 114 aa11.89□□□□□ -0.51
NEDD4-202ENST00000435532 KMT2EQ8IZD2 1858 aa11.89□□□□□ -0.51
NEDD4-202ENST00000435532 CADP27708 2225 aa11.89□□□□□ -0.51
NEDD4-202ENST00000435532 BOD1L2Q8IYS8 172 aa11.89□□□□□ -0.51
NEDD4-202ENST00000435532 DEFB131BA0A096LNP1 70 aa11.89□□□□□ -0.51
NEDD4-202ENST00000435532 IGLC2P0DOY2 106 aa11.89□□□□□ -0.51
NEDD4-202ENST00000435532 FAM167A-AS1Q96KT0 104 aa11.89□□□□□ -0.51
NEDD4-202ENST00000435532 COL5A1P20908 1838 aaPredicted RBP11.89□□□□□ -0.51
NEDD4-202ENST00000435532 MORN5Q5VZ52 161 aa11.89□□□□□ -0.51
NEDD4-202ENST00000435532 INAFM2P0DMQ5 153 aa11.88□□□□□ -0.51
NEDD4-202ENST00000435532 GAGE2EQ4V326 116 aa11.88□□□□□ -0.51
NEDD4-202ENST00000435532 GAGE2DQ9UEU5 116 aa11.88□□□□□ -0.51
NEDD4-202ENST00000435532 KIR3DS1Q14943 382 aa11.88□□□□□ -0.51
NEDD4-202ENST00000435532 RPL39LQ96EH5 51 aaKnown RBP11.88□□□□□ -0.51
NEDD4-202ENST00000435532 Q9H8V8 135 aa11.88□□□□□ -0.51
NEDD4-202ENST00000435532 PRSS47A8MTI9 375 aa11.87□□□□□ -0.51
NEDD4-202ENST00000435532 K7EQG2 157 aa11.87□□□□□ -0.51
NEDD4-202ENST00000435532 HIST1H4AP62805 103 aaKnown RBP11.87□□□□□ -0.51
NEDD4-202ENST00000435532 ZFP2Q6ZN57 461 aa11.87□□□□□ -0.51
NEDD4-202ENST00000435532 HIVEP2P31629 2446 aa11.87□□□□□ -0.51
NEDD4-202ENST00000435532 GAGE2BQ13066 116 aa11.87□□□□□ -0.51
NEDD4-202ENST00000435532 KLK12Q9UKR0 248 aa11.87□□□□□ -0.51
NEDD4-202ENST00000435532 UBE2AP49459 152 aa11.87□□□□□ -0.51
NEDD4-202ENST00000435532 FGF6P10767 208 aa11.86□□□□□ -0.51
NEDD4-202ENST00000435532 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.86□□□□□ -0.516e-7■■■□□ 15.2
NEDD4-202ENST00000435532 TRAV10A0A0B4J240 114 aa11.86□□□□□ -0.51
NEDD4-202ENST00000435532 COX7B2Q8TF08 81 aa11.86□□□□□ -0.51
NEDD4-202ENST00000435532 PTPRSQ13332 1948 aa11.86□□□□□ -0.51
NEDD4-202ENST00000435532 MED13Q9UHV7 2174 aa11.86□□□□□ -0.51
NEDD4-202ENST00000435532 DSCR8Q96T75 97 aa11.86□□□□□ -0.51
NEDD4-202ENST00000435532 ALPK3Q96L96 1907 aa11.86□□□□□ -0.51
NEDD4-202ENST00000435532 CRYGBP07316 175 aa11.86□□□□□ -0.51
NEDD4-202ENST00000435532 FAM222AQ5U5X8 452 aa11.85□□□□□ -0.51
NEDD4-202ENST00000435532 GAGE2AQ6NT46 116 aa11.85□□□□□ -0.51
NEDD4-202ENST00000435532 C4orf48Q5BLP8 95 aa11.85□□□□□ -0.51
NEDD4-202ENST00000435532 CREBBPQ92793 2442 aa11.85□□□□□ -0.51
NEDD4-202ENST00000435532 TRAV26-1A0A087WT03 109 aa11.84□□□□□ -0.51
NEDD4-202ENST00000435532 ASPHD1Q5U4P2 390 aa11.84□□□□□ -0.51
NEDD4-202ENST00000435532 MRPL52Q86TS9 123 aaKnown RBP11.84□□□□□ -0.51
NEDD4-202ENST00000435532 ZNF664Q8N3J9 261 aa11.84□□□□□ -0.51
NEDD4-202ENST00000435532 EML6Q6ZMW3 1958 aa11.84□□□□□ -0.51
NEDD4-202ENST00000435532 NOTCH2Q04721 2471 aa11.84□□□□□ -0.51
NEDD4-202ENST00000435532 PSMB8P28062 276 aa11.84□□□□□ -0.51
NEDD4-202ENST00000435532 TRBV20-1A0A075B6N2 111 aa11.83□□□□□ -0.51
NEDD4-202ENST00000435532 BVES-AS1Q5T3Y7 98 aa11.83□□□□□ -0.51
NEDD4-202ENST00000435532 MPV17L2Q567V2 206 aa11.83□□□□□ -0.52
NEDD4-202ENST00000435532 C9JAW5 83 aa11.83□□□□□ -0.52
NEDD4-202ENST00000435532 POLR3KQ9Y2Y1 108 aaPredicted RBP11.82□□□□□ -0.52
NEDD4-202ENST00000435532 SPAG11BQ08648 103 aa11.82□□□□□ -0.52
NEDD4-202ENST00000435532 MDFICQ9P1T7 246 aa11.82□□□□□ -0.52
NEDD4-202ENST00000435532 CACNA1AO00555 2505 aa11.82□□□□□ -0.52
NEDD4-202ENST00000435532 GATA1P15976 413 aaPredicted RBP11.81□□□□□ -0.52
NEDD4-202ENST00000435532 LINC01545Q5VT33 79 aa11.81□□□□□ -0.52
NEDD4-202ENST00000435532 LYPD6BQ8NI32 183 aa11.81□□□□□ -0.52
NEDD4-202ENST00000435532 ACACBO00763 2458 aa11.81□□□□□ -0.52
NEDD4-202ENST00000435532 CTRLP40313 264 aa11.81□□□□□ -0.52
NEDD4-202ENST00000435532 CDSNQ15517 529 aa11.81□□□□□ -0.52
NEDD4-202ENST00000435532 P0C879 139 aa11.81□□□□□ -0.52
NEDD4-202ENST00000435532 DEFB1P60022 68 aa11.81□□□□□ -0.52
NEDD4-202ENST00000435532 C10orf91Q5T1B1 145 aa11.81□□□□□ -0.52
NEDD4-202ENST00000435532 PROP1O75360 226 aa11.8□□□□□ -0.52
NEDD4-202ENST00000435532 CRYGDP07320 174 aa11.8□□□□□ -0.52
NEDD4-202ENST00000435532 FAM110AQ9BQ89 295 aa11.8□□□□□ -0.52
NEDD4-202ENST00000435532 IGKV1D-37A0A075B6S9 117 aa11.8□□□□□ -0.52
NEDD4-202ENST00000435532 KIR2DL5BA0A0G2JN68 375 aa11.8□□□□□ -0.52
NEDD4-202ENST00000435532 KIR2DL5BA0A0G2JPC4 375 aa11.8□□□□□ -0.52
NEDD4-202ENST00000435532 UTF1Q5T230 341 aa11.8□□□□□ -0.52
NEDD4-202ENST00000435532 KIR2DL5AQ8N109 375 aa11.8□□□□□ -0.52
NEDD4-202ENST00000435532 KIR2DL5BQ8NHK3 375 aa11.8□□□□□ -0.52
NEDD4-202ENST00000435532 IFITM1P13164 125 aa11.8□□□□□ -0.52
NEDD4-202ENST00000435532 NFE4Q86UQ8 179 aa11.8□□□□□ -0.52
NEDD4-202ENST00000435532 LINC00482Q8N8I6 264 aa11.8□□□□□ -0.52
NEDD4-202ENST00000435532 PRO1854Q9UHT4 67 aa11.8□□□□□ -0.52
NEDD4-202ENST00000435532 TNRC6AQ8NDV7 1962 aaKnown RBP11.8□□□□□ -0.52
NEDD4-202ENST00000435532 OTOGLQ3ZCN5 2332 aa11.8□□□□□ -0.52
NEDD4-202ENST00000435532 H3BQ85 93 aa11.79□□□□□ -0.52
NEDD4-202ENST00000435532 KRTAP10-9P60411 292 aa11.79□□□□□ -0.52
NEDD4-202ENST00000435532 COX8AP10176 69 aa11.79□□□□□ -0.52
NEDD4-202ENST00000435532 GTSF1LQ9H1H1 148 aa11.79□□□□□ -0.52
NEDD4-202ENST00000435532 Q8N6K4 173 aa11.79□□□□□ -0.52
NEDD4-202ENST00000435532 DEFB105AQ8NG35 78 aa11.79□□□□□ -0.52
NEDD4-202ENST00000435532 NAA38Q9BRA0 125 aaKnown RBP11.79□□□□□ -0.52
NEDD4-202ENST00000435532 UBL5Q9BZL1 73 aa11.79□□□□□ -0.52
NEDD4-202ENST00000435532 DOPEY2Q9Y3R5 2298 aa11.78□□□□□ -0.52
NEDD4-202ENST00000435532 MSRB1Q9NZV6 116 aa11.78□□□□□ -0.52
NEDD4-202ENST00000435532 LOC105371267A0A1B0GV96 52 aa11.78□□□□□ -0.52
NEDD4-202ENST00000435532 Q6ZTI0 123 aa11.78□□□□□ -0.52
NEDD4-202ENST00000435532 GAGE12HA6NDE8 117 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms